RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 SMIM22K7EJ46 135 aa12.68□□□□□ -0.38
SPTLC2-205ENST00000556607 ERC2O15083 957 aa12.68□□□□□ -0.38
SPTLC2-205ENST00000556607 CNMDO75829 334 aa12.68□□□□□ -0.38
SPTLC2-205ENST00000556607 XRCC5P13010 732 aaKnown RBP12.68□□□□□ -0.38
SPTLC2-205ENST00000556607 CAPN2P17655 700 aa12.68□□□□□ -0.38
SPTLC2-205ENST00000556607 RRP1P56182 461 aaKnown RBP12.68□□□□□ -0.38
SPTLC2-205ENST00000556607 MAP2K5Q13163 448 aa12.68□□□□□ -0.38
SPTLC2-205ENST00000556607 LRRFIP1Q32MZ4 808 aaKnown RBP12.68□□□□□ -0.38
SPTLC2-205ENST00000556607 CHRDL2Q6WN34 429 aa12.68□□□□□ -0.38
SPTLC2-205ENST00000556607 C16orf86Q6ZW13 317 aa12.68□□□□□ -0.38
SPTLC2-205ENST00000556607 NECAB2Q7Z6G3 386 aa12.68□□□□□ -0.38
SPTLC2-205ENST00000556607 APPBP2Q92624 585 aa12.68□□□□□ -0.38
SPTLC2-205ENST00000556607 PAWRQ96IZ0 340 aaKnown RBP12.68□□□□□ -0.38
SPTLC2-205ENST00000556607 APBA2Q99767 749 aa12.68□□□□□ -0.38
SPTLC2-205ENST00000556607 MKNK2Q9HBH9 465 aa12.68□□□□□ -0.38
SPTLC2-205ENST00000556607 BTBD7Q9P203 1132 aa12.68□□□□□ -0.38
SPTLC2-205ENST00000556607 ARPP21Q9UBL0 812 aaPredicted RBP12.68□□□□□ -0.38
SPTLC2-205ENST00000556607 PCDHB15Q9Y5E8 787 aa12.68□□□□□ -0.38
SPTLC2-205ENST00000556607 RNF113AO15541 343 aaKnown RBP12.67□□□□□ -0.38
SPTLC2-205ENST00000556607 FLOT1O75955 427 aa12.67□□□□□ -0.38
SPTLC2-205ENST00000556607 ZFYP08048 801 aaPredicted RBP12.67□□□□□ -0.38
SPTLC2-205ENST00000556607 CNGA1P29973 690 aa12.67□□□□□ -0.38
SPTLC2-205ENST00000556607 TDO2P48775 406 aa12.67□□□□□ -0.38
SPTLC2-205ENST00000556607 CACNB2Q08289 660 aaPredicted RBP12.67□□□□□ -0.38
SPTLC2-205ENST00000556607 CCL14Q16627 93 aa12.67□□□□□ -0.38
SPTLC2-205ENST00000556607 MORN1Q5T089 497 aa12.67□□□□□ -0.38
SPTLC2-205ENST00000556607 POTEEQ6S8J3 1075 aa12.67□□□□□ -0.38
SPTLC2-205ENST00000556607 DIS3LQ8TF46 1054 aaKnown RBP12.67□□□□□ -0.38
SPTLC2-205ENST00000556607 STRBPQ96SI9 672 aaKnown RBP12.67□□□□□ -0.38
SPTLC2-205ENST00000556607 SLC15A5A6NIM6 579 aa12.66□□□□□ -0.38
SPTLC2-205ENST00000556607 EEF2P13639 858 aaKnown RBP12.66□□□□□ -0.38
SPTLC2-205ENST00000556607 PTPREP23469 700 aa12.66□□□□□ -0.38
SPTLC2-205ENST00000556607 MFSD14CQ5VZR4 134 aa12.66□□□□□ -0.38
SPTLC2-205ENST00000556607 LBX2Q6XYB7 198 aa12.66□□□□□ -0.38
SPTLC2-205ENST00000556607 UBE2Q1Q7Z7E8 422 aa12.66□□□□□ -0.38
SPTLC2-205ENST00000556607 DPP9Q86TI2 863 aa12.66□□□□□ -0.38
SPTLC2-205ENST00000556607 LPAR1Q92633 364 aa12.66□□□□□ -0.38
SPTLC2-205ENST00000556607 OSBP2Q969R2 916 aa12.66□□□□□ -0.38
SPTLC2-205ENST00000556607 CRBNQ96SW2 442 aa12.66□□□□□ -0.38
SPTLC2-205ENST00000556607 FSD1Q9BTV5 496 aa12.66□□□□□ -0.38
SPTLC2-205ENST00000556607 CRISPLD2Q9H0B8 497 aa12.66□□□□□ -0.38
SPTLC2-205ENST00000556607 VCPKMTQ9H867 229 aa12.66□□□□□ -0.38
SPTLC2-205ENST00000556607 KANSL2Q9H9L4 492 aa12.66□□□□□ -0.38
SPTLC2-205ENST00000556607 TMX2Q9Y320 296 aa12.66□□□□□ -0.38
SPTLC2-205ENST00000556607 COL11A1P12107 1806 aaPredicted RBP12.66□□□□□ -0.38
SPTLC2-205ENST00000556607 TTC41PQ6P2S7 1318 aa12.65□□□□□ -0.38
SPTLC2-205ENST00000556607 MYH4Q9Y623 1939 aa12.65□□□□□ -0.38
SPTLC2-205ENST00000556607 GSG1L2A8MUP6 293 aa12.65□□□□□ -0.38
SPTLC2-205ENST00000556607 GPAA1O43292 621 aa12.65□□□□□ -0.38
SPTLC2-205ENST00000556607 GNAT2P19087 354 aa12.65□□□□□ -0.38
SPTLC2-205ENST00000556607 CCND3P30281 292 aaPredicted RBP12.65□□□□□ -0.38
SPTLC2-205ENST00000556607 DSG3P32926 999 aa12.65□□□□□ -0.38
SPTLC2-205ENST00000556607 KIAA1755Q5JYT7 1200 aa12.65□□□□□ -0.38
SPTLC2-205ENST00000556607 ANKRD45Q5TZF3 282 aa12.65□□□□□ -0.38
SPTLC2-205ENST00000556607 NCAPG2Q86XI2 1143 aa12.65□□□□□ -0.38
SPTLC2-205ENST00000556607 ANKLE1Q8NAG6 615 aa12.65□□□□□ -0.38
SPTLC2-205ENST00000556607 USP6NLQ92738 828 aa12.65□□□□□ -0.38
SPTLC2-205ENST00000556607 MOV10L1Q9BXT6 1211 aaKnown RBP12.65□□□□□ -0.38
SPTLC2-205ENST00000556607 NBPF3Q9H094 633 aa12.65□□□□□ -0.38
SPTLC2-205ENST00000556607 C11orf49Q9H6J7 331 aa12.65□□□□□ -0.38
SPTLC2-205ENST00000556607 GOPCQ9HD26 462 aa12.65□□□□□ -0.38
SPTLC2-205ENST00000556607 M0R2C6 588 aa12.64□□□□□ -0.39
SPTLC2-205ENST00000556607 WDR46O15213 610 aaKnown RBP12.64□□□□□ -0.39
SPTLC2-205ENST00000556607 ERCC3P19447 782 aa12.64□□□□□ -0.39
SPTLC2-205ENST00000556607 MX1P20591 662 aa12.64□□□□□ -0.39
SPTLC2-205ENST00000556607 SBK1Q52WX2 424 aa12.64□□□□□ -0.39
SPTLC2-205ENST00000556607 SIAH1Q8IUQ4 282 aa12.64□□□□□ -0.39
SPTLC2-205ENST00000556607 C7orf61Q8IZ16 206 aa12.64□□□□□ -0.39
SPTLC2-205ENST00000556607 ZNF444Q8N0Y2 327 aaPredicted RBP12.64□□□□□ -0.39
SPTLC2-205ENST00000556607 NPLOC4Q8TAT6 608 aa12.64□□□□□ -0.39
SPTLC2-205ENST00000556607 ATG4CQ96DT6 458 aa12.64□□□□□ -0.39
SPTLC2-205ENST00000556607 SPATC1LQ9H0A9 340 aa12.64□□□□□ -0.39
SPTLC2-205ENST00000556607 ZNF287Q9HBT7 754 aa12.64□□□□□ -0.39
SPTLC2-205ENST00000556607 PARP14Q460N5 1801 aa12.64□□□□□ -0.39
SPTLC2-205ENST00000556607 ALPK3Q96L96 1907 aa12.64□□□□□ -0.39
SPTLC2-205ENST00000556607 FRMPD3Q5JV73 1810 aa12.63□□□□□ -0.39
SPTLC2-205ENST00000556607 RLFQ13129 1914 aa12.63□□□□□ -0.39
SPTLC2-205ENST00000556607 ZNFX1Q9P2E3 1918 aaKnown RBP12.63□□□□□ -0.39
SPTLC2-205ENST00000556607 PATL2C9JE40 543 aaKnown RBP12.63□□□□□ -0.39
SPTLC2-205ENST00000556607 STRNO43815 780 aa12.63□□□□□ -0.39
SPTLC2-205ENST00000556607 ADORA2AP29274 412 aa12.63□□□□□ -0.39
SPTLC2-205ENST00000556607 SLC4A3P48751 1232 aa12.63□□□□□ -0.39
SPTLC2-205ENST00000556607 GRB14Q14449 540 aa12.63□□□□□ -0.39
SPTLC2-205ENST00000556607 MAP3K21Q5TCX8 1036 aa12.63□□□□□ -0.39
SPTLC2-205ENST00000556607 GIMAP6Q6P9H5 292 aa12.63□□□□□ -0.39
SPTLC2-205ENST00000556607 MB21D1Q8N884 522 aa12.63□□□□□ -0.39
SPTLC2-205ENST00000556607 OTUD7AQ8TE49 926 aaPredicted RBP12.63□□□□□ -0.39
SPTLC2-205ENST00000556607 SEC62Q99442 399 aaKnown RBP12.63□□□□□ -0.39
SPTLC2-205ENST00000556607 NACAP1Q9BZK3 213 aa12.63□□□□□ -0.39
SPTLC2-205ENST00000556607 SLC5A4Q9NY91 659 aa12.63□□□□□ -0.39
SPTLC2-205ENST00000556607 FLRT1Q9NZU1 646 aa12.63□□□□□ -0.39
SPTLC2-205ENST00000556607 OGDHLQ9ULD0 1010 aa12.63□□□□□ -0.39
SPTLC2-205ENST00000556607 CTDP1Q9Y5B0 961 aaPredicted RBP12.63□□□□□ -0.39
SPTLC2-205ENST00000556607 A0A0G2JMZ2 1700 aa12.62□□□□□ -0.39
SPTLC2-205ENST00000556607 PRDM1O75626 825 aa12.62□□□□□ -0.39
SPTLC2-205ENST00000556607 RASA1P20936 1047 aa12.62□□□□□ -0.39
SPTLC2-205ENST00000556607 CYP2C19P33261 490 aa12.62□□□□□ -0.39
SPTLC2-205ENST00000556607 FAM83BQ5T0W9 1011 aa12.62□□□□□ -0.39
SPTLC2-205ENST00000556607 IFNL3Q8IZI9 196 aa12.62□□□□□ -0.39
SPTLC2-205ENST00000556607 PI4K2BQ8TCG2 481 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms