RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 PRKCQQ04759 706 aa7.43□□□□□ -1.22
SCFD1-221ENST00000556534 NAALADL2Q58DX5 795 aa7.43□□□□□ -1.22
SCFD1-221ENST00000556534 MCF2L2Q86YR7 1114 aa7.43□□□□□ -1.22
SCFD1-221ENST00000556534 C19orf47Q8N9M1 422 aaKnown RBP7.43□□□□□ -1.22
SCFD1-221ENST00000556534 HRASLS5Q96KN8 279 aa7.43□□□□□ -1.22
SCFD1-221ENST00000556534 FBXL18Q96ME1 805 aa7.43□□□□□ -1.22
SCFD1-221ENST00000556534 SLC6A18Q96N87 628 aa7.43□□□□□ -1.22
SCFD1-221ENST00000556534 CRBNQ96SW2 442 aa7.43□□□□□ -1.22
SCFD1-221ENST00000556534 GMLQ99445 158 aa7.43□□□□□ -1.22
SCFD1-221ENST00000556534 FAM86C2PA6NEL3 165 aa7.42□□□□□ -1.22
SCFD1-221ENST00000556534 CLEC3AO75596 197 aa7.42□□□□□ -1.22
SCFD1-221ENST00000556534 NBPF12Q5TAG4 269 aaPredicted RBP7.42□□□□□ -1.22
SCFD1-221ENST00000556534 CDKAL1Q5VV42 579 aa7.42□□□□□ -1.22
SCFD1-221ENST00000556534 ZNF574Q6ZN55 896 aaPredicted RBP7.42□□□□□ -1.22
SCFD1-221ENST00000556534 VPS37DQ86XT2 251 aa7.42□□□□□ -1.22
SCFD1-221ENST00000556534 STK11IPQ8N1F8 1099 aa7.42□□□□□ -1.22
SCFD1-221ENST00000556534 CPLX3Q8WVH0 158 aa7.42□□□□□ -1.22
SCFD1-221ENST00000556534 ZNF512BQ96KM6 892 aaPredicted RBP7.42□□□□□ -1.22
SCFD1-221ENST00000556534 HSPA12BQ96MM6 686 aa7.42□□□□□ -1.22
SCFD1-221ENST00000556534 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.42□□□□□ -1.22
SCFD1-221ENST00000556534 SEMA3GQ9NS98 782 aa7.42□□□□□ -1.22
SCFD1-221ENST00000556534 VAV3Q9UKW4 847 aa7.42□□□□□ -1.22
SCFD1-221ENST00000556534 DNAJA1P31689 397 aaKnown RBP7.41□□□□□ -1.22
SCFD1-221ENST00000556534 CD96P40200 585 aa7.41□□□□□ -1.22
SCFD1-221ENST00000556534 BNIP3Q12983 259 aa7.41□□□□□ -1.22
SCFD1-221ENST00000556534 AOC3Q16853 763 aa7.41□□□□□ -1.22
SCFD1-221ENST00000556534 UNC5AQ6ZN44 842 aa7.41□□□□□ -1.22
SCFD1-221ENST00000556534 SPRED2Q7Z698 418 aa7.41□□□□□ -1.22
SCFD1-221ENST00000556534 PPFIBP1Q86W92 1011 aa7.41□□□□□ -1.22
SCFD1-221ENST00000556534 PAK6Q9NQU5 681 aaPredicted RBP7.41□□□□□ -1.22
SCFD1-221ENST00000556534 SUCOQ9UBS9 1254 aaKnown RBP7.41□□□□□ -1.22
SCFD1-221ENST00000556534 ANGEL1Q9UNK9 670 aaKnown RBP7.41□□□□□ -1.22
SCFD1-221ENST00000556534 SLC5A6Q9Y289 635 aa7.41□□□□□ -1.22
SCFD1-221ENST00000556534 H3BS24 57 aa7.4□□□□□ -1.22
SCFD1-221ENST00000556534 SRFP11831 508 aa7.4□□□□□ -1.22
SCFD1-221ENST00000556534 THAP5Q7Z6K1 395 aa7.4□□□□□ -1.22
SCFD1-221ENST00000556534 TTC6Q86TZ1 520 aa7.4□□□□□ -1.22
SCFD1-221ENST00000556534 FLCNQ8NFG4 579 aa7.4□□□□□ -1.22
SCFD1-221ENST00000556534 ANAPC16Q96DE5 110 aa7.4□□□□□ -1.22
SCFD1-221ENST00000556534 GPR62Q9BZJ7 368 aa7.4□□□□□ -1.22
SCFD1-221ENST00000556534 LTBP3Q9NS15 1303 aa7.4□□□□□ -1.22
SCFD1-221ENST00000556534 A0A1W2PQH9 124 aa7.39□□□□□ -1.23
SCFD1-221ENST00000556534 C9IYK1 514 aa7.39□□□□□ -1.23
SCFD1-221ENST00000556534 WNT11O96014 354 aa7.39□□□□□ -1.23
SCFD1-221ENST00000556534 SSBP05455 408 aaKnown RBP eCLIP7.39□□□□□ -1.23
SCFD1-221ENST00000556534 CD8BP10966 210 aa7.39□□□□□ -1.23
SCFD1-221ENST00000556534 PMS1P54277 932 aaKnown RBP7.39□□□□□ -1.23
SCFD1-221ENST00000556534 CHMP4BP1P59074 171 aa7.39□□□□□ -1.23
SCFD1-221ENST00000556534 DUSP15Q9H1R2 295 aaPredicted RBP7.39□□□□□ -1.23
SCFD1-221ENST00000556534 KCNH3Q9ULD8 1083 aa7.39□□□□□ -1.23
SCFD1-221ENST00000556534 MRVI1Q9Y6F6 885 aa7.39□□□□□ -1.23
SCFD1-221ENST00000556534 SHISA3A0PJX4 238 aa7.38□□□□□ -1.23
SCFD1-221ENST00000556534 CASP7P55210 303 aa7.38□□□□□ -1.23
SCFD1-221ENST00000556534 SNW1Q13573 536 aaKnown RBP7.38□□□□□ -1.23
SCFD1-221ENST00000556534 NBPF9Q3BBW0 867 aa7.38□□□□□ -1.23
SCFD1-221ENST00000556534 TDRD10Q5VZ19 366 aaKnown RBP7.38□□□□□ -1.23
SCFD1-221ENST00000556534 ASB11Q8WXH4 323 aa7.38□□□□□ -1.23
SCFD1-221ENST00000556534 DHRS1Q96LJ7 313 aa7.38□□□□□ -1.23
SCFD1-221ENST00000556534 ZNF408Q9H9D4 720 aa7.38□□□□□ -1.23
SCFD1-221ENST00000556534 ATP13A1Q9HD20 1204 aa7.38□□□□□ -1.23
SCFD1-221ENST00000556534 ZNF214Q9UL59 606 aaPredicted RBP7.38□□□□□ -1.23
SCFD1-221ENST00000556534 SMAD7O15105 426 aaKnown RBP7.37□□□□□ -1.23
SCFD1-221ENST00000556534 SHOXO15266 292 aa7.37□□□□□ -1.23
SCFD1-221ENST00000556534 GAB4Q2WGN9 574 aa7.37□□□□□ -1.23
SCFD1-221ENST00000556534 MKRN2Q9H000 416 aaKnown RBP7.37□□□□□ -1.23
SCFD1-221ENST00000556534 PRKAG3Q9UGI9 489 aa7.37□□□□□ -1.23
SCFD1-221ENST00000556534 SLC12A7Q9Y666 1083 aa7.37□□□□□ -1.23
SCFD1-221ENST00000556534 WASH4PA8MWX3 477 aa7.36□□□□□ -1.23
SCFD1-221ENST00000556534 FUT4P22083 530 aa7.36□□□□□ -1.23
SCFD1-221ENST00000556534 ETFBP38117 255 aa7.36□□□□□ -1.23
SCFD1-221ENST00000556534 GP2P55259 537 aaKnown RBP7.36□□□□□ -1.23
SCFD1-221ENST00000556534 IKZF1Q13422 519 aa7.36□□□□□ -1.23
SCFD1-221ENST00000556534 ANGEL2Q5VTE6 544 aaKnown RBP7.36□□□□□ -1.23
SCFD1-221ENST00000556534 TMC3Q7Z5M5 1100 aa7.36□□□□□ -1.23
SCFD1-221ENST00000556534 SMARCC1Q92922 1105 aaPredicted RBP7.36□□□□□ -1.23
SCFD1-221ENST00000556534 UBE2FQ969M7 185 aa7.36□□□□□ -1.23
SCFD1-221ENST00000556534 TRIT1Q9H3H1 467 aaKnown RBP7.36□□□□□ -1.23
SCFD1-221ENST00000556534 PHAXQ9H814 394 aaKnown RBP7.36□□□□□ -1.23
SCFD1-221ENST00000556534 ZSWIM5Q9P217 1185 aa7.36□□□□□ -1.23
SCFD1-221ENST00000556534 NMIQ13287 307 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-221ENST00000556534 PPP2R5EQ16537 467 aa7.35□□□□□ -1.23
SCFD1-221ENST00000556534 AXDND1Q5T1B0 1012 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-221ENST00000556534 TSPYL5Q86VY4 417 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-221ENST00000556534 KLHL6Q8WZ60 621 aa7.35□□□□□ -1.23
SCFD1-221ENST00000556534 HDAC8Q9BY41 377 aa7.35□□□□□ -1.23
SCFD1-221ENST00000556534 PRDM14Q9GZV8 571 aa7.35□□□□□ -1.23
SCFD1-221ENST00000556534 OAS3Q9Y6K5 1087 aaKnown RBP7.35□□□□□ -1.23
SCFD1-221ENST00000556534 ESR1P03372 595 aa7.34□□□□□ -1.23
SCFD1-221ENST00000556534 AUHQ13825 339 aaKnown RBP7.34□□□□□ -1.23
SCFD1-221ENST00000556534 BBS9Q3SYG4 887 aa7.34□□□□□ -1.23
SCFD1-221ENST00000556534 TNNI3KQ59H18 835 aa7.34□□□□□ -1.23
SCFD1-221ENST00000556534 DCAF15Q66K64 600 aa7.34□□□□□ -1.23
SCFD1-221ENST00000556534 TMPRSS7Q7RTY8 843 aa7.34□□□□□ -1.23
SCFD1-221ENST00000556534 TP53INP2Q8IXH6 220 aa7.34□□□□□ -1.23
SCFD1-221ENST00000556534 CCDC144CPQ8IYA2 1237 aa7.34□□□□□ -1.23
SCFD1-221ENST00000556534 C7orf61Q8IZ16 206 aa7.34□□□□□ -1.23
SCFD1-221ENST00000556534 ABI1Q8IZP0 508 aa7.34□□□□□ -1.23
SCFD1-221ENST00000556534 AGBL5Q8NDL9 886 aa7.34□□□□□ -1.23
SCFD1-221ENST00000556534 GPATCH2Q9NW75 528 aa7.34□□□□□ -1.23
SCFD1-221ENST00000556534 ACTR10Q9NZ32 417 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms