RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 CEP95Q96GE4 821 aa20.24■□□□□ 0.83
PSEN1-217ENST00000556533 NBPF3Q9H094 633 aa20.24■□□□□ 0.83
PSEN1-217ENST00000556533 VCPKMTQ9H867 229 aa20.24■□□□□ 0.83
PSEN1-217ENST00000556533 GOPCQ9HD26 462 aa20.24■□□□□ 0.83
PSEN1-217ENST00000556533 NYAP2Q9P242 653 aa20.24■□□□□ 0.83
PSEN1-217ENST00000556533 IGKV6D-41A0A0C4DH26 115 aa20.23■□□□□ 0.83
PSEN1-217ENST00000556533 ORC4O43929 436 aa20.23■□□□□ 0.83
PSEN1-217ENST00000556533 FMNL1O95466 1100 aaPredicted RBP20.23■□□□□ 0.83
PSEN1-217ENST00000556533 PSMC4P43686 418 aa20.23■□□□□ 0.83
PSEN1-217ENST00000556533 GCLCP48506 637 aaPredicted RBP20.23■□□□□ 0.83
PSEN1-217ENST00000556533 HERVK_113P62684 666 aa20.23■□□□□ 0.83
PSEN1-217ENST00000556533 CAP1Q01518 475 aa20.23■□□□□ 0.83
PSEN1-217ENST00000556533 CATSPERGQ6ZRH7 1159 aa20.23■□□□□ 0.83
PSEN1-217ENST00000556533 KIAA1211Q6ZU35 1233 aa20.23■□□□□ 0.83
PSEN1-217ENST00000556533 OTOP1Q7RTM1 612 aa20.23■□□□□ 0.83
PSEN1-217ENST00000556533 MTMR4Q9NYA4 1195 aa20.23■□□□□ 0.83
PSEN1-217ENST00000556533 NMT2O60551 498 aa20.22■□□□□ 0.83
PSEN1-217ENST00000556533 PEX10O60683 326 aa20.22■□□□□ 0.83
PSEN1-217ENST00000556533 TTLL1O95922 423 aa20.22■□□□□ 0.83
PSEN1-217ENST00000556533 LPAR1Q92633 364 aa20.22■□□□□ 0.83
PSEN1-217ENST00000556533 CHMP4CQ96CF2 233 aa20.22■□□□□ 0.83
PSEN1-217ENST00000556533 PAGR1Q9BTK6 254 aa20.22■□□□□ 0.83
PSEN1-217ENST00000556533 RNF41Q9H4P4 317 aaPredicted RBP20.22■□□□□ 0.83
PSEN1-217ENST00000556533 FGRP09769 529 aa20.21■□□□□ 0.83
PSEN1-217ENST00000556533 STAG1Q8WVM7 1258 aa20.21■□□□□ 0.83
PSEN1-217ENST00000556533 ESYT1Q9BSJ8 1104 aa20.21■□□□□ 0.83
PSEN1-217ENST00000556533 STX8Q9UNK0 236 aa20.21■□□□□ 0.83
PSEN1-217ENST00000556533 F5H6K3 240 aa20.2■□□□□ 0.82
PSEN1-217ENST00000556533 KLRC3Q07444 240 aa20.2■□□□□ 0.82
PSEN1-217ENST00000556533 PKN2Q16513 984 aaKnown RBP20.2■□□□□ 0.82
PSEN1-217ENST00000556533 CASC1Q6TDU7 716 aa20.2■□□□□ 0.82
PSEN1-217ENST00000556533 LRRC47Q8N1G4 583 aaKnown RBP20.2■□□□□ 0.82
PSEN1-217ENST00000556533 TRIM47Q96LD4 638 aa20.2■□□□□ 0.82
PSEN1-217ENST00000556533 IL17RBQ9NRM6 502 aa20.2■□□□□ 0.82
PSEN1-217ENST00000556533 U3KPZ7 1027 aaPredicted RBP20.2■□□□□ 0.82
PSEN1-217ENST00000556533 CDC45O75419 566 aa20.19■□□□□ 0.82
PSEN1-217ENST00000556533 CAPN15O75808 1086 aa20.19■□□□□ 0.82
PSEN1-217ENST00000556533 PCP11498 1178 aaKnown RBP20.19■□□□□ 0.82
PSEN1-217ENST00000556533 CTGFP29279 349 aa20.19■□□□□ 0.82
PSEN1-217ENST00000556533 FCGRTP55899 365 aa20.19■□□□□ 0.82
PSEN1-217ENST00000556533 COG2Q14746 738 aa20.19■□□□□ 0.82
PSEN1-217ENST00000556533 GPRC5AQ8NFJ5 357 aa20.19■□□□□ 0.82
PSEN1-217ENST00000556533 ESR2Q92731 530 aa20.19■□□□□ 0.82
PSEN1-217ENST00000556533 ABHD8Q96I13 439 aa20.19■□□□□ 0.82
PSEN1-217ENST00000556533 NUP88Q99567 741 aaPredicted RBP20.19■□□□□ 0.82
PSEN1-217ENST00000556533 RBPJLQ9UBG7 517 aa20.19■□□□□ 0.82
PSEN1-217ENST00000556533 ISY1Q9ULR0 285 aaKnown RBP20.19■□□□□ 0.82
PSEN1-217ENST00000556533 NEDD4P46934 1319 aa20.19■□□□□ 0.82
PSEN1-217ENST00000556533 WDR46O15213 610 aaKnown RBP20.18■□□□□ 0.82
PSEN1-217ENST00000556533 FLOT1O75955 427 aa20.18■□□□□ 0.82
PSEN1-217ENST00000556533 NDUFB10O96000 172 aa20.18■□□□□ 0.82
PSEN1-217ENST00000556533 FAM110CQ1W6H9 321 aa20.18■□□□□ 0.82
PSEN1-217ENST00000556533 PPP4R3BQ5MIZ7 849 aa20.18■□□□□ 0.82
PSEN1-217ENST00000556533 FAM83BQ5T0W9 1011 aa20.18■□□□□ 0.82
PSEN1-217ENST00000556533 FBXO46Q6PJ61 603 aaPredicted RBP20.18■□□□□ 0.82
PSEN1-217ENST00000556533 CCAR1Q8IX12 1150 aaKnown RBP20.18■□□□□ 0.82
PSEN1-217ENST00000556533 MKL1Q969V6 931 aa20.18■□□□□ 0.82
PSEN1-217ENST00000556533 TXNRD2Q9NNW7 524 aa20.18■□□□□ 0.82
PSEN1-217ENST00000556533 ANO2Q9NQ90 1003 aa20.18■□□□□ 0.82
PSEN1-217ENST00000556533 HOXC10Q9NYD6 342 aa20.18■□□□□ 0.82
PSEN1-217ENST00000556533 MTMR7Q9Y216 660 aa20.18■□□□□ 0.82
PSEN1-217ENST00000556533 PTPN22Q9Y2R2 807 aa20.18■□□□□ 0.82
PSEN1-217ENST00000556533 LOC285556D6RIA3 1793 aa20.18■□□□□ 0.82
PSEN1-217ENST00000556533 PTPRFP10586 1907 aa20.17■□□□□ 0.82
PSEN1-217ENST00000556533 B4E1Z4 1266 aa20.17■□□□□ 0.82
PSEN1-217ENST00000556533 TNPO2O14787 897 aaKnown RBP20.17■□□□□ 0.82
PSEN1-217ENST00000556533 KDM4AO75164 1064 aa20.17■□□□□ 0.82
PSEN1-217ENST00000556533 NKX2-3Q8TAU0 364 aa20.17■□□□□ 0.82
PSEN1-217ENST00000556533 GTF3C2Q8WUA4 911 aaPredicted RBP20.17■□□□□ 0.82
PSEN1-217ENST00000556533 MAP4K1Q92918 833 aa20.17■□□□□ 0.82
PSEN1-217ENST00000556533 ZKSCAN3Q9BRR0 538 aa20.17■□□□□ 0.82
PSEN1-217ENST00000556533 PLIN4Q96Q06 1357 aa20.17■□□□□ 0.82
PSEN1-217ENST00000556533 SPDYE16A6NNV3 312 aaPredicted RBP20.16■□□□□ 0.82
PSEN1-217ENST00000556533 HOXD10P28358 340 aa20.16■□□□□ 0.82
PSEN1-217ENST00000556533 Q3C1V9 767 aa20.16■□□□□ 0.82
PSEN1-217ENST00000556533 SLFN13Q68D06 897 aa20.16■□□□□ 0.82
PSEN1-217ENST00000556533 POTEEQ6S8J3 1075 aa20.16■□□□□ 0.82
PSEN1-217ENST00000556533 FBXO28Q9NVF7 368 aa20.16■□□□□ 0.82
PSEN1-217ENST00000556533 MORF4L1Q9UBU8 362 aa20.16■□□□□ 0.82
PSEN1-217ENST00000556533 RBM8AQ9Y5S9 174 aaKnown RBP20.16■□□□□ 0.82
PSEN1-217ENST00000556533 GNRH1P01148 92 aa20.15■□□□□ 0.82
PSEN1-217ENST00000556533 ERVK-9P63128 1117 aa20.15■□□□□ 0.82
PSEN1-217ENST00000556533 ERVK-24P63145 666 aa20.15■□□□□ 0.82
PSEN1-217ENST00000556533 KRT23Q9C075 422 aa20.15■□□□□ 0.82
PSEN1-217ENST00000556533 LSG1Q9H089 658 aaKnown RBP20.15■□□□□ 0.82
PSEN1-217ENST00000556533 CWC22Q9HCG8 908 aaKnown RBP20.15■□□□□ 0.82
PSEN1-217ENST00000556533 HPS5Q9UPZ3 1129 aa20.15■□□□□ 0.82
PSEN1-217ENST00000556533 RABGAP1Q9Y3P9 1069 aa20.15■□□□□ 0.82
PSEN1-217ENST00000556533 MYH8P13535 1937 aa20.15■□□□□ 0.82
PSEN1-217ENST00000556533 CCDC85CA6NKD9 419 aa20.14■□□□□ 0.81
PSEN1-217ENST00000556533 CNMDO75829 334 aa20.14■□□□□ 0.81
PSEN1-217ENST00000556533 CYP21A2P08686 494 aa20.14■□□□□ 0.81
PSEN1-217ENST00000556533 MCCP23508 829 aa20.14■□□□□ 0.81
PSEN1-217ENST00000556533 DSG3P32926 999 aa20.14■□□□□ 0.81
PSEN1-217ENST00000556533 PLS1Q14651 629 aa20.14■□□□□ 0.81
PSEN1-217ENST00000556533 WDR78Q5VTH9 848 aa20.14■□□□□ 0.81
PSEN1-217ENST00000556533 GMCL1P1Q8NEA9 526 aa20.14■□□□□ 0.81
PSEN1-217ENST00000556533 COA7Q96BR5 231 aa20.14■□□□□ 0.81
PSEN1-217ENST00000556533 ATG4CQ96DT6 458 aa20.14■□□□□ 0.81
PSEN1-217ENST00000556533 CNNM2Q9H8M5 875 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms