RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 PIK3C2BO00750 1634 aa5.12□□□□□ -1.59
TGFB3-205ENST00000556507 CAMSAP1Q5T5Y3 1602 aa5.12□□□□□ -1.59
TGFB3-205ENST00000556507 LDHBP07195 334 aaKnown RBP5.12□□□□□ -1.59
TGFB3-205ENST00000556507 P4HBP07237 508 aaKnown RBP5.12□□□□□ -1.59
TGFB3-205ENST00000556507 HCLS1P14317 486 aaPredicted RBP5.12□□□□□ -1.59
TGFB3-205ENST00000556507 MTHFSP49914 203 aa5.12□□□□□ -1.59
TGFB3-205ENST00000556507 IRAK1P51617 712 aa5.12□□□□□ -1.59
TGFB3-205ENST00000556507 TTLL4Q14679 1199 aa5.12□□□□□ -1.59
TGFB3-205ENST00000556507 MSMPQ1L6U9 139 aa5.12□□□□□ -1.59
TGFB3-205ENST00000556507 OGFOD3Q6PK18 319 aa5.12□□□□□ -1.59
TGFB3-205ENST00000556507 AEBP1Q8IUX7 1158 aa5.12□□□□□ -1.59
TGFB3-205ENST00000556507 SMYD4Q8IYR2 804 aaPredicted RBP5.12□□□□□ -1.59
TGFB3-205ENST00000556507 GPBAR1Q8TDU6 330 aa5.12□□□□□ -1.59
TGFB3-205ENST00000556507 ACSBG1Q96GR2 724 aa5.12□□□□□ -1.59
TGFB3-205ENST00000556507 PNNQ9H307 717 aaKnown RBP5.12□□□□□ -1.59
TGFB3-205ENST00000556507 LRRC4CQ9HCJ2 640 aa5.12□□□□□ -1.59
TGFB3-205ENST00000556507 TERF2IPQ9NYB0 399 aa5.12□□□□□ -1.59
TGFB3-205ENST00000556507 PPM1HQ9ULR3 514 aa5.12□□□□□ -1.59
TGFB3-205ENST00000556507 ANGEL1Q9UNK9 670 aaKnown RBP5.12□□□□□ -1.59
TGFB3-205ENST00000556507 KDM2BQ8NHM5 1336 aa5.12□□□□□ -1.59
TGFB3-205ENST00000556507 ANKRD36BQ8N2N9 1353 aa5.12□□□□□ -1.59
TGFB3-205ENST00000556507 NSD3Q9BZ95 1437 aa5.12□□□□□ -1.59
TGFB3-205ENST00000556507 ZC3H13Q5T200 1668 aaKnown RBP5.12□□□□□ -1.59
TGFB3-205ENST00000556507 ENC1O14682 589 aa5.11□□□□□ -1.59
TGFB3-205ENST00000556507 FBXO24O75426 580 aa5.11□□□□□ -1.59
TGFB3-205ENST00000556507 BMP6P22004 513 aa5.11□□□□□ -1.59
TGFB3-205ENST00000556507 ZNF252P-AS1Q0IIN9 211 aa5.11□□□□□ -1.59
TGFB3-205ENST00000556507 CYP27C1Q4G0S4 372 aa5.11□□□□□ -1.59
TGFB3-205ENST00000556507 ZC3H12AQ5D1E8 599 aaKnown RBP5.11□□□□□ -1.59
TGFB3-205ENST00000556507 C20orf194Q5TEA3 1177 aa5.11□□□□□ -1.59
TGFB3-205ENST00000556507 TCP11L2Q8N4U5 519 aa5.11□□□□□ -1.59
TGFB3-205ENST00000556507 KRTAP4-8Q9BYQ9 185 aa5.11□□□□□ -1.59
TGFB3-205ENST00000556507 C12orf49Q9H741 205 aa5.11□□□□□ -1.59
TGFB3-205ENST00000556507 SSU72Q9NP77 194 aaKnown RBP5.11□□□□□ -1.59
TGFB3-205ENST00000556507 FAM8A1Q9UBU6 413 aa5.11□□□□□ -1.59
TGFB3-205ENST00000556507 PCOLCE2Q9UKZ9 415 aa5.11□□□□□ -1.59
TGFB3-205ENST00000556507 NEXMIFQ5QGS0 1516 aa5.11□□□□□ -1.59
TGFB3-205ENST00000556507 DIP2CQ9Y2E4 1556 aa5.11□□□□□ -1.59
TGFB3-205ENST00000556507 USP32Q8NFA0 1604 aa5.11□□□□□ -1.59
TGFB3-205ENST00000556507 QRICH2Q9H0J4 1663 aa5.11□□□□□ -1.59
TGFB3-205ENST00000556507 PAGE1O75459 146 aa5.1□□□□□ -1.59
TGFB3-205ENST00000556507 HMGB1P09429 215 aaKnown RBP5.1□□□□□ -1.59
TGFB3-205ENST00000556507 CT47B1P0C2W7 299 aaPredicted RBP5.1□□□□□ -1.59
TGFB3-205ENST00000556507 USP17L7P0C7H9 530 aa5.1□□□□□ -1.59
TGFB3-205ENST00000556507 CDK5R2Q13319 367 aa5.1□□□□□ -1.59
TGFB3-205ENST00000556507 MCTP1Q6DN14 999 aa5.1□□□□□ -1.59
TGFB3-205ENST00000556507 CYB5RLQ6IPT4 315 aa5.1□□□□□ -1.59
TGFB3-205ENST00000556507 MPRIPQ6WCQ1 1025 aa5.1□□□□□ -1.59
TGFB3-205ENST00000556507 GRIN3AQ8TCU5 1115 aa5.1□□□□□ -1.59
TGFB3-205ENST00000556507 FRMD6Q96NE9 622 aa5.1□□□□□ -1.59
TGFB3-205ENST00000556507 BSDC1Q9NW68 430 aaPredicted RBP5.1□□□□□ -1.59
TGFB3-205ENST00000556507 POGKQ9P215 609 aa5.1□□□□□ -1.59
TGFB3-205ENST00000556507 CCDC39Q9UFE4 941 aa5.1□□□□□ -1.59
TGFB3-205ENST00000556507 RICTORQ6R327 1708 aa5.09□□□□□ -1.59
TGFB3-205ENST00000556507 BCAR3O75815 825 aa5.09□□□□□ -1.59
TGFB3-205ENST00000556507 TRIM37O94972 964 aa5.09□□□□□ -1.59
TGFB3-205ENST00000556507 PRNPP04156 253 aa5.09□□□□□ -1.59
TGFB3-205ENST00000556507 FAM87AP0C7U9 286 aa5.09□□□□□ -1.59
TGFB3-205ENST00000556507 TNNT2P45379 298 aaPredicted RBP5.09□□□□□ -1.59
TGFB3-205ENST00000556507 ERVK-24P63145 666 aa5.09□□□□□ -1.59
TGFB3-205ENST00000556507 FGD1P98174 961 aa5.09□□□□□ -1.59
TGFB3-205ENST00000556507 LRRC14Q15048 493 aa5.09□□□□□ -1.59
TGFB3-205ENST00000556507 LLGL2Q6P1M3 1020 aa5.09□□□□□ -1.59
TGFB3-205ENST00000556507 SND1Q7KZF4 910 aaKnown RBP eCLIP5.09□□□□□ -1.59
TGFB3-205ENST00000556507 HDGFL2Q7Z4V5 671 aaPredicted RBP5.09□□□□□ -1.59
TGFB3-205ENST00000556507 VSIG10LQ86VR7 867 aa5.09□□□□□ -1.59
TGFB3-205ENST00000556507 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.09□□□□□ -1.59
TGFB3-205ENST00000556507 RNF214Q8ND24 703 aa5.09□□□□□ -1.59
TGFB3-205ENST00000556507 ANKRD24Q8TF21 1146 aa5.09□□□□□ -1.59
TGFB3-205ENST00000556507 MYH16Q9H6N6 1097 aa5.09□□□□□ -1.59
TGFB3-205ENST00000556507 CACNA2D2Q9NY47 1150 aa5.09□□□□□ -1.59
TGFB3-205ENST00000556507 STK26Q9P289 416 aa5.09□□□□□ -1.59
TGFB3-205ENST00000556507 ZC3H7BQ9UGR2 993 aaKnown RBP5.09□□□□□ -1.59
TGFB3-205ENST00000556507 SIGLEC1Q9BZZ2 1709 aa5.09□□□□□ -1.6
TGFB3-205ENST00000556507 AGLP35573 1532 aa5.08□□□□□ -1.6
TGFB3-205ENST00000556507 MED14O60244 1454 aa5.08□□□□□ -1.6
TGFB3-205ENST00000556507 YEATS2Q9ULM3 1422 aa5.08□□□□□ -1.6
TGFB3-205ENST00000556507 ABCC11Q96J66 1382 aa5.08□□□□□ -1.6
TGFB3-205ENST00000556507 NEFMP07197 916 aa5.08□□□□□ -1.6
TGFB3-205ENST00000556507 U2AF1L5P0DN76 240 aaPredicted RBP5.08□□□□□ -1.6
TGFB3-205ENST00000556507 CDK11BP21127 795 aaKnown RBP5.08□□□□□ -1.6
TGFB3-205ENST00000556507 CANXP27824 592 aaKnown RBP5.08□□□□□ -1.6
TGFB3-205ENST00000556507 GNA15P30679 374 aa5.08□□□□□ -1.6
TGFB3-205ENST00000556507 RARSP54136 660 aaKnown RBP5.08□□□□□ -1.6
TGFB3-205ENST00000556507 U2AF1Q01081 240 aaKnown RBP eCLIP5.08□□□□□ -1.6
TGFB3-205ENST00000556507 TP53INP2Q8IXH6 220 aa5.08□□□□□ -1.6
TGFB3-205ENST00000556507 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.08□□□□□ -1.6
TGFB3-205ENST00000556507 PMFBP1Q8TBY8 1022 aa5.08□□□□□ -1.6
TGFB3-205ENST00000556507 ISL2Q96A47 359 aa5.08□□□□□ -1.6
TGFB3-205ENST00000556507 FBXL18Q96ME1 805 aa5.08□□□□□ -1.6
TGFB3-205ENST00000556507 PRAM1Q96QH2 718 aa5.08□□□□□ -1.6
TGFB3-205ENST00000556507 CDK19Q9BWU1 502 aa5.08□□□□□ -1.6
TGFB3-205ENST00000556507 PICK1Q9NRD5 415 aa5.08□□□□□ -1.6
TGFB3-205ENST00000556507 CYP8B1Q9UNU6 501 aa5.08□□□□□ -1.6
TGFB3-205ENST00000556507 TTF2Q9UNY4 1162 aaKnown RBP5.08□□□□□ -1.6
TGFB3-205ENST00000556507 CSADQ9Y600 493 aa5.08□□□□□ -1.6
TGFB3-205ENST00000556507 TMEM131LA2VDJ0 1609 aa5.08□□□□□ -1.6
TGFB3-205ENST00000556507 REREQ9P2R6 1566 aa5.08□□□□□ -1.6
TGFB3-205ENST00000556507 TULP4Q9NRJ4 1543 aa5.07□□□□□ -1.6
TGFB3-205ENST00000556507 CFAP65Q6ZU64 1925 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms