RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 CEP135Q66GS9 1140 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 SPTY2D1Q68D10 685 aaPredicted RBP6.17□□□□□ -1.42
GPHN-213ENST00000556501 C15orf52Q6ZUT6 534 aaKnown RBP6.17□□□□□ -1.42
GPHN-213ENST00000556501 FOXP4Q8IVH2 680 aaPredicted RBP6.17□□□□□ -1.42
GPHN-213ENST00000556501 VSTM4Q8IW00 320 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 CMTR1Q8N1G2 835 aaKnown RBP6.17□□□□□ -1.42
GPHN-213ENST00000556501 MLKLQ8NB16 471 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 CCDC112Q8NEF3 446 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 SPATA20Q8TB22 786 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 TSC1Q92574 1164 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 SMARCE1Q969G3 411 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 FERMT2Q96AC1 680 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 BRMS1Q9HCU9 246 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 VPS54Q9P1Q0 977 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 SERTAD1Q9UHV2 236 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 DACH1Q9UI36 760 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 MAN1B1Q9UKM7 699 aa6.17□□□□□ -1.42
GPHN-213ENST00000556501 ARIH1Q9Y4X5 557 aaPredicted RBP6.17□□□□□ -1.42
GPHN-213ENST00000556501 POLR2DO15514 142 aaKnown RBP6.16□□□□□ -1.42
GPHN-213ENST00000556501 TOM1O60784 492 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 ZPR1O75312 459 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 CYP2D6P10635 497 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 SCG2P13521 617 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 ZNF18P17022 549 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 PRDX5P30044 214 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 TM4SF1P30408 202 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 TRAPPC10P48553 1259 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 PLCD1P51178 756 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 KCNQ4P56696 695 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 UBASH3AP57075 661 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 ATP2C1P98194 919 aaPredicted RBP6.16□□□□□ -1.42
GPHN-213ENST00000556501 NCBP1Q09161 790 aaKnown RBP6.16□□□□□ -1.42
GPHN-213ENST00000556501 PTPN14Q15678 1187 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 CT47A1Q5JQC4 288 aaPredicted RBP6.16□□□□□ -1.42
GPHN-213ENST00000556501 TTC38Q5R3I4 469 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 ISM2Q6H9L7 571 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 RCSD1Q6JBY9 416 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 CHADLQ6NUI6 762 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 TPTE2Q6XPS3 522 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 PTF1AQ7RTS3 328 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 SH3RF1Q7Z6J0 888 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 FCHSD1Q86WN1 690 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 FNBP4Q8N3X1 1017 aaPredicted RBP6.16□□□□□ -1.42
GPHN-213ENST00000556501 CCDC82Q8N4S0 544 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 CTCFLQ8NI51 663 aaPredicted RBP6.16□□□□□ -1.42
GPHN-213ENST00000556501 ENOX1Q8TC92 643 aaKnown RBP6.16□□□□□ -1.42
GPHN-213ENST00000556501 UBE2Q2Q8WVN8 375 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 ANKS1AQ92625 1134 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 DPF2Q92785 391 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 CCDC34Q96HJ3 373 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 PPP1R13BQ96KQ4 1090 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 CCDC94Q9BW85 323 aaPredicted RBP6.16□□□□□ -1.42
GPHN-213ENST00000556501 CSRNP2Q9H175 543 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 CABP5Q9NP86 173 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 INTS13Q9NVM9 706 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 TFCP2L1Q9NZI6 479 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 MKRN1Q9UHC7 482 aaKnown RBP6.16□□□□□ -1.42
GPHN-213ENST00000556501 CCNL1Q9UK58 526 aaPredicted RBP6.16□□□□□ -1.42
GPHN-213ENST00000556501 RTCBQ9Y3I0 505 aaKnown RBP6.16□□□□□ -1.42
GPHN-213ENST00000556501 SNED1Q8TER0 1413 aa6.16□□□□□ -1.42
GPHN-213ENST00000556501 A0A087X0B3 334 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 WNT7AO00755 349 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 CCP110O43303 1012 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 SERPINC1P01008 464 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 TUBB4AP04350 444 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 SLFN14P0C7P3 912 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 ERCC5P28715 1186 aaPredicted RBP6.15□□□□□ -1.42
GPHN-213ENST00000556501 KIF5BP33176 963 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 GSTO1P78417 241 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 FMR1Q06787 632 aaKnown RBP eCLIP6.15□□□□□ -1.42
GPHN-213ENST00000556501 TBX2Q13207 712 aaPredicted RBP6.15□□□□□ -1.42
GPHN-213ENST00000556501 GRAPQ13588 217 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 PFKFB3Q16875 520 aaPredicted RBP6.15□□□□□ -1.42
GPHN-213ENST00000556501 CFAP100Q494V2 611 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 CCDC178Q5BJE1 867 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 EARS2Q5JPH6 523 aaKnown RBP6.15□□□□□ -1.42
GPHN-213ENST00000556501 SPECC1Q5M775 1068 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 C12orf60Q5U649 245 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 E4F1Q66K89 784 aaPredicted RBP6.15□□□□□ -1.42
GPHN-213ENST00000556501 USP49Q70CQ1 688 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 SMIM5Q71RC9 77 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 TXNRD3Q86VQ6 643 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 DZIP1Q86YF9 867 aaKnown RBP6.15□□□□□ -1.42
GPHN-213ENST00000556501 CERS3Q8IU89 383 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 GRAMD1CQ8IYS0 662 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 FAM177A1Q8N128 213 aaPredicted RBP6.15□□□□□ -1.42
GPHN-213ENST00000556501 SRBD1Q8N5C6 995 aaKnown RBP6.15□□□□□ -1.42
GPHN-213ENST00000556501 EFCAB3Q8N7B9 438 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 WDR66Q8TBY9 1149 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 GRAPLQ8TC17 118 aaPredicted RBP6.15□□□□□ -1.42
GPHN-213ENST00000556501 NGLY1Q96IV0 654 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 C8orf37Q96NL8 207 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 MED15Q96RN5 788 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 PYM1Q9BRP8 204 aaKnown RBP6.15□□□□□ -1.42
GPHN-213ENST00000556501 TMX1Q9H3N1 280 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 GPBP1L1Q9HC44 474 aaPredicted RBP6.15□□□□□ -1.42
GPHN-213ENST00000556501 SH3GLB2Q9NR46 395 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 FANCLQ9NW38 375 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 LEMD3Q9Y2U8 911 aa6.15□□□□□ -1.42
GPHN-213ENST00000556501 V9GY48 417 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms