RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 LRRC4CQ9HCJ2 640 aa5.83□□□□□ -1.48
ATXN3-241ENST00000556374 GPN3Q9UHW5 284 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-241ENST00000556374 UNC13BO14795 1591 aa5.83□□□□□ -1.48
ATXN3-241ENST00000556374 CHD2O14647 1828 aaKnown RBP5.83□□□□□ -1.48
ATXN3-241ENST00000556374 SPATA31E1Q6ZUB1 1445 aa5.82□□□□□ -1.48
ATXN3-241ENST00000556374 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-241ENST00000556374 MROH1Q8NDA8 1641 aa5.82□□□□□ -1.48
ATXN3-241ENST00000556374 TMEM265A0A087WTH1 108 aa5.82□□□□□ -1.48
ATXN3-241ENST00000556374 IGF2BP3O00425 579 aaKnown RBP eCLIP5.82□□□□□ -1.48
ATXN3-241ENST00000556374 DYNC1LI2O43237 492 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-241ENST00000556374 TRIM37O94972 964 aa5.82□□□□□ -1.48
ATXN3-241ENST00000556374 TSPY4P0CV99 314 aa5.82□□□□□ -1.48
ATXN3-241ENST00000556374 TSPY10P0CW01 314 aa5.82□□□□□ -1.48
ATXN3-241ENST00000556374 IRX6P78412 446 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-241ENST00000556374 TTLL4Q14679 1199 aa5.82□□□□□ -1.48
ATXN3-241ENST00000556374 COL19A1Q14993 1142 aa5.82□□□□□ -1.48
ATXN3-241ENST00000556374 ALG1LQ6GMV1 187 aa5.82□□□□□ -1.48
ATXN3-241ENST00000556374 SULF2Q8IWU5 870 aa5.82□□□□□ -1.48
ATXN3-241ENST00000556374 KCT2Q8NC54 265 aa5.82□□□□□ -1.48
ATXN3-241ENST00000556374 NECAB3Q96P71 396 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-241ENST00000556374 RTEL1-TNFRSF6BF6WH68 1400 aa5.82□□□□□ -1.48
ATXN3-241ENST00000556374 TET3O43151 1660 aa5.82□□□□□ -1.48
ATXN3-241ENST00000556374 DHX29Q7Z478 1369 aaKnown RBP5.81□□□□□ -1.48
ATXN3-241ENST00000556374 TRPM1Q7Z4N2 1603 aa5.81□□□□□ -1.48
ATXN3-241ENST00000556374 FANCGO15287 622 aa5.81□□□□□ -1.48
ATXN3-241ENST00000556374 FAM87AP0C7U9 286 aa5.81□□□□□ -1.48
ATXN3-241ENST00000556374 FUT4P22083 530 aa5.81□□□□□ -1.48
ATXN3-241ENST00000556374 RBM6P78332 1123 aaKnown RBP5.81□□□□□ -1.48
ATXN3-241ENST00000556374 LRRC14Q15048 493 aa5.81□□□□□ -1.48
ATXN3-241ENST00000556374 ZSCAN29Q8IWY8 852 aaPredicted RBP5.81□□□□□ -1.48
ATXN3-241ENST00000556374 DUSP23Q9BVJ7 150 aa5.81□□□□□ -1.48
ATXN3-241ENST00000556374 TNKS2Q9H2K2 1166 aa5.81□□□□□ -1.48
ATXN3-241ENST00000556374 CYP8B1Q9UNU6 501 aa5.81□□□□□ -1.48
ATXN3-241ENST00000556374 SPHKAPQ2M3C7 1700 aa5.81□□□□□ -1.48
ATXN3-241ENST00000556374 BCL9LQ86UU0 1499 aa5.81□□□□□ -1.48
ATXN3-241ENST00000556374 NUP155O75694 1391 aa5.8□□□□□ -1.48
ATXN3-241ENST00000556374 ZNF644Q9H582 1327 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-241ENST00000556374 CEACAM5P06731 702 aa5.8□□□□□ -1.48
ATXN3-241ENST00000556374 RING1Q06587 406 aa5.8□□□□□ -1.48
ATXN3-241ENST00000556374 NBPF8Q3BBV2 869 aa5.8□□□□□ -1.48
ATXN3-241ENST00000556374 OGFOD2Q6N063 350 aa5.8□□□□□ -1.48
ATXN3-241ENST00000556374 WFDC3Q8IUB2 231 aa5.8□□□□□ -1.48
ATXN3-241ENST00000556374 C3orf58Q8NDZ4 430 aa5.8□□□□□ -1.48
ATXN3-241ENST00000556374 KCNB2Q92953 911 aa5.8□□□□□ -1.48
ATXN3-241ENST00000556374 HRASLS5Q96KN8 279 aa5.8□□□□□ -1.48
ATXN3-241ENST00000556374 CARD11Q9BXL7 1154 aa5.8□□□□□ -1.48
ATXN3-241ENST00000556374 GTF2IRD1Q9UHL9 959 aa5.8□□□□□ -1.48
ATXN3-241ENST00000556374 NUDCQ9Y266 331 aa5.8□□□□□ -1.48
ATXN3-241ENST00000556374 IQGAP3Q86VI3 1631 aa5.8□□□□□ -1.48
ATXN3-241ENST00000556374 CCDC144AA2RUR9 1427 aa5.8□□□□□ -1.48
ATXN3-241ENST00000556374 EFCAB6Q5THR3 1501 aa5.79□□□□□ -1.48
ATXN3-241ENST00000556374 ASXL1Q8IXJ9 1541 aa5.79□□□□□ -1.48
ATXN3-241ENST00000556374 WASHC2CQ9Y4E1 1318 aa5.79□□□□□ -1.48
ATXN3-241ENST00000556374 LTKP29376 864 aa5.79□□□□□ -1.48
ATXN3-241ENST00000556374 ANP32AP39687 249 aaKnown RBP5.79□□□□□ -1.48
ATXN3-241ENST00000556374 HNRNPMP52272 730 aaKnown RBP eCLIP5.79□□□□□ -1.48
ATXN3-241ENST00000556374 OXCT1P55809 520 aa5.79□□□□□ -1.48
ATXN3-241ENST00000556374 FGD1P98174 961 aa5.79□□□□□ -1.48
ATXN3-241ENST00000556374 FMR1Q06787 632 aaKnown RBP eCLIP5.79□□□□□ -1.48
ATXN3-241ENST00000556374 PLCL1Q15111 1095 aa5.79□□□□□ -1.48
ATXN3-241ENST00000556374 ZNF792Q3KQV3 632 aa5.79□□□□□ -1.48
ATXN3-241ENST00000556374 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.79□□□□□ -1.48
ATXN3-241ENST00000556374 NXPE4Q6UWF7 544 aa5.79□□□□□ -1.48
ATXN3-241ENST00000556374 CCDC136Q96JN2 1154 aa5.79□□□□□ -1.48
ATXN3-241ENST00000556374 MARF1Q9Y4F3 1742 aaKnown RBP5.79□□□□□ -1.48
ATXN3-241ENST00000556374 BRD4O60885 1362 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-241ENST00000556374 BRWD3Q6RI45 1802 aa5.78□□□□□ -1.48
ATXN3-241ENST00000556374 MYBBP1AQ9BQG0 1328 aaKnown RBP5.78□□□□□ -1.48
ATXN3-241ENST00000556374 PNMA6FA0A0J9YX94 578 aa5.78□□□□□ -1.48
ATXN3-241ENST00000556374 PATL2C9JE40 543 aaKnown RBP5.78□□□□□ -1.48
ATXN3-241ENST00000556374 RNGTTO60942 597 aaKnown RBP5.78□□□□□ -1.48
ATXN3-241ENST00000556374 PAPLNO95428 1278 aa5.78□□□□□ -1.48
ATXN3-241ENST00000556374 KCNA6P17658 529 aa5.78□□□□□ -1.48
ATXN3-241ENST00000556374 ZNF157P51786 506 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-241ENST00000556374 RALBP1Q15311 655 aa5.78□□□□□ -1.48
ATXN3-241ENST00000556374 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.78□□□□□ -1.48
ATXN3-241ENST00000556374 TMEM40Q8WWA1 233 aa5.78□□□□□ -1.48
ATXN3-241ENST00000556374 ASB11Q8WXH4 323 aa5.78□□□□□ -1.48
ATXN3-241ENST00000556374 ISL2Q96A47 359 aa5.78□□□□□ -1.48
ATXN3-241ENST00000556374 KRTAP4-9Q9BYQ8 210 aa5.78□□□□□ -1.48
ATXN3-241ENST00000556374 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.78□□□□□ -1.48
ATXN3-241ENST00000556374 ZC3H12CQ9C0D7 883 aaKnown RBP5.78□□□□□ -1.48
ATXN3-241ENST00000556374 BIN2Q9UBW5 565 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-241ENST00000556374 AKAP2Q9Y2D5 859 aa5.78□□□□□ -1.48
ATXN3-241ENST00000556374 ADGRB3O60242 1522 aa5.78□□□□□ -1.48
ATXN3-241ENST00000556374 DUOX2Q9NRD8 1548 aa5.78□□□□□ -1.48
ATXN3-241ENST00000556374 TMEM2Q9UHN6 1383 aa5.78□□□□□ -1.48
ATXN3-241ENST00000556374 BLMP54132 1417 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-241ENST00000556374 MYO5BQ9ULV0 1848 aa5.77□□□□□ -1.49
ATXN3-241ENST00000556374 KIF3BO15066 747 aa5.77□□□□□ -1.49
ATXN3-241ENST00000556374 NEFMP07197 916 aa5.77□□□□□ -1.49
ATXN3-241ENST00000556374 HCLS1P14317 486 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-241ENST00000556374 BMP6P22004 513 aa5.77□□□□□ -1.49
ATXN3-241ENST00000556374 YY1P25490 414 aa5.77□□□□□ -1.49
ATXN3-241ENST00000556374 MAPK1P28482 360 aa5.77□□□□□ -1.49
ATXN3-241ENST00000556374 JAG1P78504 1218 aa5.77□□□□□ -1.49
ATXN3-241ENST00000556374 KCNA1Q09470 495 aa5.77□□□□□ -1.49
ATXN3-241ENST00000556374 CDK5R2Q13319 367 aa5.77□□□□□ -1.49
ATXN3-241ENST00000556374 CNGB1Q14028 1251 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-241ENST00000556374 MAP1SQ66K74 1059 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms