RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 PDE4CQ08493 712 aa5.76□□□□□ -1.49
ATXN3-240ENST00000556339 PPM1JQ5JR12 505 aa5.76□□□□□ -1.49
ATXN3-240ENST00000556339 SLC23A3Q6PIS1 610 aa5.76□□□□□ -1.49
ATXN3-240ENST00000556339 CDC37L1Q7L3B6 337 aa5.76□□□□□ -1.49
ATXN3-240ENST00000556339 ARID3AQ99856 593 aa5.76□□□□□ -1.49
ATXN3-240ENST00000556339 RBCK1Q9BYM8 510 aa5.76□□□□□ -1.49
ATXN3-240ENST00000556339 PRDM7Q9NQW5 492 aa5.76□□□□□ -1.49
ATXN3-240ENST00000556339 ARHGAP23Q9P227 1491 aa5.76□□□□□ -1.49
ATXN3-240ENST00000556339 FAM135BQ49AJ0 1406 aa5.75□□□□□ -1.49
ATXN3-240ENST00000556339 PRDM15P57071 1507 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-240ENST00000556339 ZP2Q05996 745 aa5.75□□□□□ -1.49
ATXN3-240ENST00000556339 KCNMB1Q16558 191 aa5.75□□□□□ -1.49
ATXN3-240ENST00000556339 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.75□□□□□ -1.49
ATXN3-240ENST00000556339 ZC3H12AQ5D1E8 599 aaKnown RBP5.75□□□□□ -1.49
ATXN3-240ENST00000556339 NXPE4Q6UWF7 544 aa5.75□□□□□ -1.49
ATXN3-240ENST00000556339 ZSWIM9Q86XI8 627 aa5.75□□□□□ -1.49
ATXN3-240ENST00000556339 STK35Q8TDR2 534 aa5.75□□□□□ -1.49
ATXN3-240ENST00000556339 C19orf44Q9H6X5 657 aa5.75□□□□□ -1.49
ATXN3-240ENST00000556339 PRDM10Q9NQV6 1147 aa5.75□□□□□ -1.49
ATXN3-240ENST00000556339 PLAGL2Q9UPG8 496 aa5.75□□□□□ -1.49
ATXN3-240ENST00000556339 SNX11Q9Y5W9 270 aa5.75□□□□□ -1.49
ATXN3-240ENST00000556339 MED1Q15648 1581 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-240ENST00000556339 NOS1P29475 1434 aa5.74□□□□□ -1.49
ATXN3-240ENST00000556339 PNMA6FA0A0J9YX94 578 aa5.74□□□□□ -1.49
ATXN3-240ENST00000556339 DCDC2CA8MYV0 355 aa5.74□□□□□ -1.49
ATXN3-240ENST00000556339 TPTE2Q6XPS3 522 aa5.74□□□□□ -1.49
ATXN3-240ENST00000556339 FAM84AQ96KN4 292 aa5.74□□□□□ -1.49
ATXN3-240ENST00000556339 FAM53CQ9NYF3 392 aa5.74□□□□□ -1.49
ATXN3-240ENST00000556339 PLEKHG1Q9ULL1 1385 aa5.74□□□□□ -1.49
ATXN3-240ENST00000556339 ADGRL2O95490 1459 aa5.74□□□□□ -1.49
ATXN3-240ENST00000556339 MYO5BQ9ULV0 1848 aa5.74□□□□□ -1.49
ATXN3-240ENST00000556339 LMTK2Q8IWU2 1503 aa5.74□□□□□ -1.49
ATXN3-240ENST00000556339 SYNMO15061 1565 aa5.73□□□□□ -1.49
ATXN3-240ENST00000556339 RPRD2Q5VT52 1461 aaKnown RBP5.73□□□□□ -1.49
ATXN3-240ENST00000556339 ROCK1Q13464 1354 aa5.73□□□□□ -1.49
ATXN3-240ENST00000556339 IGHA2P01877 340 aa5.73□□□□□ -1.49
ATXN3-240ENST00000556339 MAPK1P28482 360 aa5.73□□□□□ -1.49
ATXN3-240ENST00000556339 GSTT1P30711 240 aa5.73□□□□□ -1.49
ATXN3-240ENST00000556339 MLANAQ16655 118 aa5.73□□□□□ -1.49
ATXN3-240ENST00000556339 TMC7Q7Z402 723 aa5.73□□□□□ -1.49
ATXN3-240ENST00000556339 FLAD1Q8NFF5 587 aa5.73□□□□□ -1.49
ATXN3-240ENST00000556339 ELMO3Q96BJ8 720 aa5.73□□□□□ -1.49
ATXN3-240ENST00000556339 CEP44Q9C0F1 390 aa5.73□□□□□ -1.49
ATXN3-240ENST00000556339 PRDM5Q9NQX1 630 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-240ENST00000556339 DCTN4Q9UJW0 460 aa5.73□□□□□ -1.49
ATXN3-240ENST00000556339 FAM155AB1AL88 458 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-240ENST00000556339 PLCB3Q01970 1234 aa5.72□□□□□ -1.49
ATXN3-240ENST00000556339 LLGL2Q6P1M3 1020 aa5.72□□□□□ -1.49
ATXN3-240ENST00000556339 MPZL3Q6UWV2 235 aa5.72□□□□□ -1.49
ATXN3-240ENST00000556339 C12orf40Q86WS4 652 aa5.72□□□□□ -1.49
ATXN3-240ENST00000556339 KCT2Q8NC54 265 aa5.72□□□□□ -1.49
ATXN3-240ENST00000556339 HEXIM2Q96MH2 286 aaKnown RBP5.72□□□□□ -1.49
ATXN3-240ENST00000556339 FOXQ1Q9C009 403 aa5.72□□□□□ -1.49
ATXN3-240ENST00000556339 TNKS2Q9H2K2 1166 aa5.72□□□□□ -1.49
ATXN3-240ENST00000556339 RGS17Q9UGC6 210 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-240ENST00000556339 PCDHA4Q9UN74 947 aa5.72□□□□□ -1.49
ATXN3-240ENST00000556339 ADGRB3O60242 1522 aa5.72□□□□□ -1.49
ATXN3-240ENST00000556339 TET3O43151 1660 aa5.72□□□□□ -1.49
ATXN3-240ENST00000556339 XIRP1Q702N8 1843 aaKnown RBP5.71□□□□□ -1.49
ATXN3-240ENST00000556339 JCADQ9P266 1359 aa5.71□□□□□ -1.5
ATXN3-240ENST00000556339 SOWAHDA6NJG2 315 aa5.71□□□□□ -1.5
ATXN3-240ENST00000556339 IGF2BP3O00425 579 aaKnown RBP eCLIP5.71□□□□□ -1.5
ATXN3-240ENST00000556339 FANCGO15287 622 aa5.71□□□□□ -1.5
ATXN3-240ENST00000556339 FBXO24O75426 580 aa5.71□□□□□ -1.5
ATXN3-240ENST00000556339 AFMP43652 599 aa5.71□□□□□ -1.5
ATXN3-240ENST00000556339 MAPK8P45983 427 aa5.71□□□□□ -1.5
ATXN3-240ENST00000556339 CLCN7P51798 805 aa5.71□□□□□ -1.5
ATXN3-240ENST00000556339 ZNF252P-AS1Q0IIN9 211 aa5.71□□□□□ -1.5
ATXN3-240ENST00000556339 LRRC14Q15048 493 aa5.71□□□□□ -1.5
ATXN3-240ENST00000556339 RGL3Q3MIN7 710 aa5.71□□□□□ -1.5
ATXN3-240ENST00000556339 ZNF772Q68DY9 489 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-240ENST00000556339 MPRIPQ6WCQ1 1025 aa5.71□□□□□ -1.5
ATXN3-240ENST00000556339 SPACA3Q8IXA5 215 aa5.71□□□□□ -1.5
ATXN3-240ENST00000556339 RETREG2Q8NC44 543 aa5.71□□□□□ -1.5
ATXN3-240ENST00000556339 NECAB3Q96P71 396 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-240ENST00000556339 TPX2Q9ULW0 747 aaKnown RBP5.71□□□□□ -1.5
ATXN3-240ENST00000556339 KDM5AP29375 1690 aaKnown RBP5.71□□□□□ -1.5
ATXN3-240ENST00000556339 CHD2O14647 1828 aaKnown RBP5.71□□□□□ -1.5
ATXN3-240ENST00000556339 GCC2Q8IWJ2 1684 aa5.7□□□□□ -1.5
ATXN3-240ENST00000556339 PRAMEF27A3QJZ7 478 aa5.7□□□□□ -1.5
ATXN3-240ENST00000556339 TRIM37O94972 964 aa5.7□□□□□ -1.5
ATXN3-240ENST00000556339 GRIN3AQ8TCU5 1115 aa5.7□□□□□ -1.5
ATXN3-240ENST00000556339 LRRC59Q96AG4 307 aaKnown RBP5.7□□□□□ -1.5
ATXN3-240ENST00000556339 KRTAP4-7Q9BYR0 210 aa5.7□□□□□ -1.5
ATXN3-240ENST00000556339 STK26Q9P289 416 aa5.7□□□□□ -1.5
ATXN3-240ENST00000556339 NKTRP30414 1462 aaKnown RBP5.7□□□□□ -1.5
ATXN3-240ENST00000556339 ALKQ9UM73 1620 aa5.7□□□□□ -1.5
ATXN3-240ENST00000556339 ROBO1Q9Y6N7 1651 aa5.69□□□□□ -1.5
ATXN3-240ENST00000556339 PIK3R4Q99570 1358 aa5.69□□□□□ -1.5
ATXN3-240ENST00000556339 PHLPP1O60346 1717 aa5.69□□□□□ -1.5
ATXN3-240ENST00000556339 ZFYVE9O95405 1425 aa5.69□□□□□ -1.5
ATXN3-240ENST00000556339 NCOA3Q9Y6Q9 1424 aa5.69□□□□□ -1.5
ATXN3-240ENST00000556339 RAP1GAPP47736 663 aa5.69□□□□□ -1.5
ATXN3-240ENST00000556339 ENOX2Q16206 610 aaKnown RBP5.69□□□□□ -1.5
ATXN3-240ENST00000556339 ZBTB37Q5TC79 503 aa5.69□□□□□ -1.5
ATXN3-240ENST00000556339 BRINP3Q76B58 766 aa5.69□□□□□ -1.5
ATXN3-240ENST00000556339 ARMCX6Q7L4S7 300 aa5.69□□□□□ -1.5
ATXN3-240ENST00000556339 SRCIN1Q9C0H9 1055 aa5.69□□□□□ -1.5
ATXN3-240ENST00000556339 PPM1HQ9ULR3 514 aa5.69□□□□□ -1.5
ATXN3-240ENST00000556339 MAPK8IP1Q9UQF2 711 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms