RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 ARMC10Q8N2F6 343 aa6.31□□□□□ -1.4
CDKN3-210ENST00000556305 GBP3Q9H0R5 595 aa6.31□□□□□ -1.4
CDKN3-210ENST00000556305 LGR6Q9HBX8 967 aa6.31□□□□□ -1.4
CDKN3-210ENST00000556305 CWC22Q9HCG8 908 aaKnown RBP6.31□□□□□ -1.4
CDKN3-210ENST00000556305 LTBP3Q9NS15 1303 aa6.3□□□□□ -1.4
CDKN3-210ENST00000556305 CYP27A1Q02318 531 aa6.3□□□□□ -1.4
CDKN3-210ENST00000556305 TCEAL1Q15170 157 aa6.3□□□□□ -1.4
CDKN3-210ENST00000556305 RSPO4Q2I0M5 234 aaPredicted RBP6.3□□□□□ -1.4
CDKN3-210ENST00000556305 CYP27C1Q4G0S4 372 aa6.3□□□□□ -1.4
CDKN3-210ENST00000556305 TAF7LQ5H9L4 462 aa6.3□□□□□ -1.4
CDKN3-210ENST00000556305 HEATR6Q6AI08 1181 aaKnown RBP6.3□□□□□ -1.4
CDKN3-210ENST00000556305 TOP6BLQ8N6T0 577 aa6.3□□□□□ -1.4
CDKN3-210ENST00000556305 RNF141Q8WVD5 230 aa6.3□□□□□ -1.4
CDKN3-210ENST00000556305 FAM83CQ9BQN1 747 aa6.3□□□□□ -1.4
CDKN3-210ENST00000556305 KRTAP4-7Q9BYR0 210 aa6.3□□□□□ -1.4
CDKN3-210ENST00000556305 GTF2IRD1Q9UHL9 959 aa6.3□□□□□ -1.4
CDKN3-210ENST00000556305 ANKRD34BA5PLL1 514 aa6.29□□□□□ -1.4
CDKN3-210ENST00000556305 B2RBV5 119 aa6.29□□□□□ -1.4
CDKN3-210ENST00000556305 SUSD5O60279 629 aa6.29□□□□□ -1.4
CDKN3-210ENST00000556305 CDK5R2Q13319 367 aa6.29□□□□□ -1.4
CDKN3-210ENST00000556305 NKAPLQ5M9Q1 402 aa6.29□□□□□ -1.4
CDKN3-210ENST00000556305 SDE2Q6IQ49 451 aa6.29□□□□□ -1.4
CDKN3-210ENST00000556305 TMEM192Q8IY95 271 aa6.29□□□□□ -1.4
CDKN3-210ENST00000556305 FAM177A1Q8N128 213 aaPredicted RBP6.29□□□□□ -1.4
CDKN3-210ENST00000556305 LRRC47Q8N1G4 583 aaKnown RBP6.29□□□□□ -1.4
CDKN3-210ENST00000556305 MICAL1Q8TDZ2 1067 aa6.29□□□□□ -1.4
CDKN3-210ENST00000556305 TP53INP1Q96A56 240 aa6.29□□□□□ -1.4
CDKN3-210ENST00000556305 KREMEN1Q96MU8 473 aa6.29□□□□□ -1.4
CDKN3-210ENST00000556305 TBC1D32Q96NH3 1257 aa6.29□□□□□ -1.4
CDKN3-210ENST00000556305 PRDM5Q9NQX1 630 aaPredicted RBP6.29□□□□□ -1.4
CDKN3-210ENST00000556305 STOML1Q9UBI4 398 aa6.29□□□□□ -1.4
CDKN3-210ENST00000556305 KCNH3Q9ULD8 1083 aa6.29□□□□□ -1.4
CDKN3-210ENST00000556305 PCDHB10Q9UN67 800 aa6.29□□□□□ -1.4
CDKN3-210ENST00000556305 RAXQ9Y2V3 346 aa6.29□□□□□ -1.4
CDKN3-210ENST00000556305 FAM221BA6H8Z2 402 aa6.28□□□□□ -1.4
CDKN3-210ENST00000556305 GSC2O15499 205 aa6.28□□□□□ -1.4
CDKN3-210ENST00000556305 SLITRK5O94991 958 aa6.28□□□□□ -1.4
CDKN3-210ENST00000556305 KIR3DL1P43629 444 aa6.28□□□□□ -1.4
CDKN3-210ENST00000556305 SSRP1Q08945 709 aaKnown RBP6.28□□□□□ -1.4
CDKN3-210ENST00000556305 TDRD10Q5VZ19 366 aaKnown RBP6.28□□□□□ -1.4
CDKN3-210ENST00000556305 CDH24Q86UP0 819 aa6.28□□□□□ -1.4
CDKN3-210ENST00000556305 CRACR2BQ8N4Y2 399 aaPredicted RBP6.28□□□□□ -1.4
CDKN3-210ENST00000556305 DNAJB8Q8NHS0 232 aa6.28□□□□□ -1.4
CDKN3-210ENST00000556305 KLHL6Q8WZ60 621 aa6.28□□□□□ -1.4
CDKN3-210ENST00000556305 DNAJC7Q99615 494 aa6.28□□□□□ -1.4
CDKN3-210ENST00000556305 APBA2Q99767 749 aa6.28□□□□□ -1.4
CDKN3-210ENST00000556305 ASCC2Q9H1I8 757 aaPredicted RBP6.28□□□□□ -1.4
CDKN3-210ENST00000556305 TBX22Q9Y458 520 aa6.28□□□□□ -1.4
CDKN3-210ENST00000556305 DYNC1LI2O43237 492 aaPredicted RBP6.27□□□□□ -1.41
CDKN3-210ENST00000556305 PPM1BO75688 479 aa6.27□□□□□ -1.41
CDKN3-210ENST00000556305 TP53P04637 393 aaPredicted RBP6.27□□□□□ -1.41
CDKN3-210ENST00000556305 FAM87AP0C7U9 286 aa6.27□□□□□ -1.41
CDKN3-210ENST00000556305 ITGA4P13612 1032 aa6.27□□□□□ -1.41
CDKN3-210ENST00000556305 SV2CQ496J9 727 aa6.27□□□□□ -1.41
CDKN3-210ENST00000556305 SFRP5Q5T4F7 317 aa6.27□□□□□ -1.41
CDKN3-210ENST00000556305 NBPF12Q5TAG4 269 aaPredicted RBP6.27□□□□□ -1.41
CDKN3-210ENST00000556305 SEZ6L2Q6UXD5 910 aa6.27□□□□□ -1.41
CDKN3-210ENST00000556305 ARHGAP27Q6ZUM4 889 aa6.27□□□□□ -1.41
CDKN3-210ENST00000556305 C7orf61Q8IZ16 206 aa6.27□□□□□ -1.41
CDKN3-210ENST00000556305 THAP3Q8WTV1 239 aaPredicted RBP6.27□□□□□ -1.41
CDKN3-210ENST00000556305 PPP1R13LQ8WUF5 828 aa6.27□□□□□ -1.41
CDKN3-210ENST00000556305 FBXL18Q96ME1 805 aa6.27□□□□□ -1.41
CDKN3-210ENST00000556305 HAUS7Q99871 368 aa6.27□□□□□ -1.41
CDKN3-210ENST00000556305 DUSP23Q9BVJ7 150 aa6.27□□□□□ -1.41
CDKN3-210ENST00000556305 SSBP4Q9BWG4 385 aaPredicted RBP6.27□□□□□ -1.41
CDKN3-210ENST00000556305 FAM86C1Q9NVL1 165 aa6.27□□□□□ -1.41
CDKN3-210ENST00000556305 WHRNQ9P202 907 aa6.27□□□□□ -1.41
CDKN3-210ENST00000556305 LRP2BPQ9P2M1 347 aa6.27□□□□□ -1.41
CDKN3-210ENST00000556305 FBXL21Q9UKT6 434 aa6.27□□□□□ -1.41
CDKN3-210ENST00000556305 PCDHB12Q9Y5F1 795 aa6.27□□□□□ -1.41
CDKN3-210ENST00000556305 KDM2BQ8NHM5 1336 aa6.26□□□□□ -1.41
CDKN3-210ENST00000556305 GNAT3A8MTJ3 354 aa6.26□□□□□ -1.41
CDKN3-210ENST00000556305 NCLP19338 710 aaKnown RBP6.26□□□□□ -1.41
CDKN3-210ENST00000556305 AUHQ13825 339 aaKnown RBP6.26□□□□□ -1.41
CDKN3-210ENST00000556305 ANKRD39Q53RE8 183 aa6.26□□□□□ -1.41
CDKN3-210ENST00000556305 ZC3H12BQ5HYM0 836 aaKnown RBP6.26□□□□□ -1.41
CDKN3-210ENST00000556305 DUSP27Q5VZP5 1158 aa6.26□□□□□ -1.41
CDKN3-210ENST00000556305 MRM1Q6IN84 353 aaKnown RBP6.26□□□□□ -1.41
CDKN3-210ENST00000556305 ADAT2Q7Z6V5 191 aaKnown RBP6.26□□□□□ -1.41
CDKN3-210ENST00000556305 ZAR1Q86SH2 424 aa6.26□□□□□ -1.41
CDKN3-210ENST00000556305 JAZF1Q86VZ6 243 aa6.26□□□□□ -1.41
CDKN3-210ENST00000556305 PPP1R14AQ96A00 147 aa6.26□□□□□ -1.41
CDKN3-210ENST00000556305 SGSM3Q96HU1 749 aa6.26□□□□□ -1.41
CDKN3-210ENST00000556305 ZNF512BQ96KM6 892 aaPredicted RBP6.26□□□□□ -1.41
CDKN3-210ENST00000556305 IPO9Q96P70 1041 aaKnown RBP6.26□□□□□ -1.41
CDKN3-210ENST00000556305 METTL22Q9BUU2 404 aaPredicted RBP6.26□□□□□ -1.41
CDKN3-210ENST00000556305 SLKQ9H2G2 1235 aaPredicted RBP6.26□□□□□ -1.41
CDKN3-210ENST00000556305 C1GALT1Q9NS00 363 aa6.26□□□□□ -1.41
CDKN3-210ENST00000556305 SUGT1Q9Y2Z0 365 aa6.26□□□□□ -1.41
CDKN3-210ENST00000556305 MRPL42Q9Y6G3 142 aaKnown RBP6.26□□□□□ -1.41
CDKN3-210ENST00000556305 CADPSQ9ULU8 1353 aa6.26□□□□□ -1.41
CDKN3-210ENST00000556305 C9IYK1 514 aa6.25□□□□□ -1.41
CDKN3-210ENST00000556305 NOP56O00567 594 aaKnown RBP6.25□□□□□ -1.41
CDKN3-210ENST00000556305 HSD3B2P26439 372 aa6.25□□□□□ -1.41
CDKN3-210ENST00000556305 CPSF6Q16630 551 aaKnown RBP eCLIP6.25□□□□□ -1.41
CDKN3-210ENST00000556305 NBPF9Q3BBW0 867 aa6.25□□□□□ -1.41
CDKN3-210ENST00000556305 SLC10A6Q3KNW5 377 aa6.25□□□□□ -1.41
CDKN3-210ENST00000556305 C2orf27AQ580R0 203 aa6.25□□□□□ -1.41
CDKN3-210ENST00000556305 NOL9Q5SY16 702 aaKnown RBP6.25□□□□□ -1.41
CDKN3-210ENST00000556305 LCE1DQ5T752 114 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms