RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.81□□□□□ -0.52
MTHFD1-213ENST00000556284 KANSL2Q9H9L4 492 aa11.81□□□□□ -0.52
MTHFD1-213ENST00000556284 PDRG1Q9NUG6 133 aa11.81□□□□□ -0.52
MTHFD1-213ENST00000556284 ANGEL1Q9UNK9 670 aaKnown RBP11.81□□□□□ -0.52
MTHFD1-213ENST00000556284 SSC5DA1L4H1 1573 aa11.8□□□□□ -0.52
MTHFD1-213ENST00000556284 CELF2O95319 508 aaKnown RBP11.8□□□□□ -0.52
MTHFD1-213ENST00000556284 SLC34A2O95436 690 aa11.8□□□□□ -0.52
MTHFD1-213ENST00000556284 INPP5BP32019 993 aa11.8□□□□□ -0.52
MTHFD1-213ENST00000556284 LIFRP42702 1097 aa11.8□□□□□ -0.52
MTHFD1-213ENST00000556284 NOVP48745 357 aa11.8□□□□□ -0.52
MTHFD1-213ENST00000556284 FSTL1Q12841 308 aa11.8□□□□□ -0.52
MTHFD1-213ENST00000556284 PRKG1Q13976 671 aa11.8□□□□□ -0.52
MTHFD1-213ENST00000556284 COL9A3Q14050 684 aaPredicted RBP11.8□□□□□ -0.52
MTHFD1-213ENST00000556284 ANKRD1Q15327 319 aa11.8□□□□□ -0.52
MTHFD1-213ENST00000556284 TMEM67Q5HYA8 995 aa11.8□□□□□ -0.52
MTHFD1-213ENST00000556284 CHST3Q7LGC8 479 aa11.8□□□□□ -0.52
MTHFD1-213ENST00000556284 SCYL3Q8IZE3 742 aa11.8□□□□□ -0.52
MTHFD1-213ENST00000556284 C2orf69Q8N8R5 385 aa11.8□□□□□ -0.52
MTHFD1-213ENST00000556284 AGXT2Q9BYV1 514 aa11.8□□□□□ -0.52
MTHFD1-213ENST00000556284 GBA2Q9HCG7 927 aaPredicted RBP11.8□□□□□ -0.52
MTHFD1-213ENST00000556284 PICK1Q9NRD5 415 aa11.8□□□□□ -0.52
MTHFD1-213ENST00000556284 IL17RBQ9NRM6 502 aa11.8□□□□□ -0.52
MTHFD1-213ENST00000556284 MTMR4Q9NYA4 1195 aa11.8□□□□□ -0.52
MTHFD1-213ENST00000556284 ZBTB21Q9ULJ3 1066 aa11.8□□□□□ -0.52
MTHFD1-213ENST00000556284 SIPA1L1O43166 1804 aa11.8□□□□□ -0.52
MTHFD1-213ENST00000556284 SH2B2O14492 632 aaPredicted RBP11.79□□□□□ -0.52
MTHFD1-213ENST00000556284 TTLL1O95922 423 aa11.79□□□□□ -0.52
MTHFD1-213ENST00000556284 GUCY1A2P33402 732 aa11.79□□□□□ -0.52
MTHFD1-213ENST00000556284 JAG1P78504 1218 aa11.79□□□□□ -0.52
MTHFD1-213ENST00000556284 WTAPQ15007 396 aa11.79□□□□□ -0.52
MTHFD1-213ENST00000556284 SEPT2Q15019 361 aa11.79□□□□□ -0.52
MTHFD1-213ENST00000556284 SEC23AQ15436 765 aa11.79□□□□□ -0.52
MTHFD1-213ENST00000556284 LDLRAD1Q5T700 205 aa11.79□□□□□ -0.52
MTHFD1-213ENST00000556284 Q6ZUG5 572 aa11.79□□□□□ -0.52
MTHFD1-213ENST00000556284 ANKRD13AQ8IZ07 590 aa11.79□□□□□ -0.52
MTHFD1-213ENST00000556284 ENAHQ8N8S7 591 aaPredicted RBP11.79□□□□□ -0.52
MTHFD1-213ENST00000556284 OXER1Q8TDS5 423 aa11.79□□□□□ -0.52
MTHFD1-213ENST00000556284 MKL1Q969V6 931 aa11.79□□□□□ -0.52
MTHFD1-213ENST00000556284 CEP95Q96GE4 821 aa11.79□□□□□ -0.52
MTHFD1-213ENST00000556284 TCEANC2Q96MN5 208 aa11.79□□□□□ -0.52
MTHFD1-213ENST00000556284 ZKSCAN3Q9BRR0 538 aa11.79□□□□□ -0.52
MTHFD1-213ENST00000556284 LRRC2Q9BYS8 371 aa11.79□□□□□ -0.52
MTHFD1-213ENST00000556284 ZNF408Q9H9D4 720 aa11.79□□□□□ -0.52
MTHFD1-213ENST00000556284 NYAP2Q9P242 653 aa11.79□□□□□ -0.52
MTHFD1-213ENST00000556284 CSADQ9Y600 493 aa11.79□□□□□ -0.52
MTHFD1-213ENST00000556284 TNKSO95271 1327 aa11.79□□□□□ -0.52
MTHFD1-213ENST00000556284 PASKQ96RG2 1323 aa11.79□□□□□ -0.52
MTHFD1-213ENST00000556284 USP17L5A8MUK1 530 aa11.78□□□□□ -0.52
MTHFD1-213ENST00000556284 NMT2O60551 498 aa11.78□□□□□ -0.52
MTHFD1-213ENST00000556284 TOP1P11387 765 aaKnown RBP11.78□□□□□ -0.52
MTHFD1-213ENST00000556284 PTPRAP18433 802 aa11.78□□□□□ -0.52
MTHFD1-213ENST00000556284 MCM2P49736 904 aa11.78□□□□□ -0.52
MTHFD1-213ENST00000556284 ICA1Q05084 483 aa11.78□□□□□ -0.52
MTHFD1-213ENST00000556284 FMR1Q06787 632 aaKnown RBP eCLIP11.78□□□□□ -0.52
MTHFD1-213ENST00000556284 RAB3GAP1Q15042 981 aa11.78□□□□□ -0.52
MTHFD1-213ENST00000556284 IFIT1BQ5T764 474 aaKnown RBP11.78□□□□□ -0.52
MTHFD1-213ENST00000556284 CST9Q5W186 159 aa11.78□□□□□ -0.52
MTHFD1-213ENST00000556284 RCSD1Q6JBY9 416 aa11.78□□□□□ -0.52
MTHFD1-213ENST00000556284 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.78□□□□□ -0.52
MTHFD1-213ENST00000556284 SGMS1Q86VZ5 419 aa11.78□□□□□ -0.52
MTHFD1-213ENST00000556284 ZKSCAN4Q969J2 545 aaPredicted RBP11.78□□□□□ -0.52
MTHFD1-213ENST00000556284 TBC1D2Q9BYX2 928 aa11.78□□□□□ -0.52
MTHFD1-213ENST00000556284 LY9Q9HBG7 655 aa11.78□□□□□ -0.52
MTHFD1-213ENST00000556284 SYNPO2Q9UMS6 1093 aa11.78□□□□□ -0.52
MTHFD1-213ENST00000556284 FZD1Q9UP38 647 aa11.78□□□□□ -0.52
MTHFD1-213ENST00000556284 SPDYE16A6NNV3 312 aaPredicted RBP11.77□□□□□ -0.53
MTHFD1-213ENST00000556284 UBE2Q2LH0YL09 131 aa11.77□□□□□ -0.53
MTHFD1-213ENST00000556284 EEF2P13639 858 aaKnown RBP11.77□□□□□ -0.53
MTHFD1-213ENST00000556284 AK2P54819 239 aa11.77□□□□□ -0.53
MTHFD1-213ENST00000556284 EVCP57679 992 aa11.77□□□□□ -0.53
MTHFD1-213ENST00000556284 TOB2Q14106 344 aaPredicted RBP11.77□□□□□ -0.53
MTHFD1-213ENST00000556284 VGLL4Q14135 290 aa11.77□□□□□ -0.53
MTHFD1-213ENST00000556284 SHROOM1Q2M3G4 852 aaPredicted RBP11.77□□□□□ -0.53
MTHFD1-213ENST00000556284 NFXL1Q6ZNB6 911 aa11.77□□□□□ -0.53
MTHFD1-213ENST00000556284 MOB2Q70IA6 237 aa11.77□□□□□ -0.53
MTHFD1-213ENST00000556284 SIAH1Q8IUQ4 282 aa11.77□□□□□ -0.53
MTHFD1-213ENST00000556284 PTCD2Q8WV60 388 aaKnown RBP11.77□□□□□ -0.53
MTHFD1-213ENST00000556284 BRF1Q92994 677 aa11.77□□□□□ -0.53
MTHFD1-213ENST00000556284 TMEM47Q9BQJ4 181 aa11.77□□□□□ -0.53
MTHFD1-213ENST00000556284 WDR18Q9BV38 432 aa11.77□□□□□ -0.53
MTHFD1-213ENST00000556284 SH2D4AQ9H788 454 aa11.77□□□□□ -0.53
MTHFD1-213ENST00000556284 AS3MTQ9HBK9 375 aa11.77□□□□□ -0.53
MTHFD1-213ENST00000556284 ARHGEF10LQ9HCE6 1279 aa11.77□□□□□ -0.53
MTHFD1-213ENST00000556284 CLIP2Q9UDT6 1046 aa11.77□□□□□ -0.53
MTHFD1-213ENST00000556284 STX8Q9UNK0 236 aa11.77□□□□□ -0.53
MTHFD1-213ENST00000556284 CCDC69A6NI79 296 aa11.76□□□□□ -0.53
MTHFD1-213ENST00000556284 ATP2B2Q01814 1243 aa11.76□□□□□ -0.53
MTHFD1-213ENST00000556284 SYNE3Q6ZMZ3 975 aa11.76□□□□□ -0.53
MTHFD1-213ENST00000556284 CATIPQ7Z7H3 387 aa11.76□□□□□ -0.53
MTHFD1-213ENST00000556284 ERO1BQ86YB8 467 aa11.76□□□□□ -0.53
MTHFD1-213ENST00000556284 SNX21Q969T3 373 aa11.76□□□□□ -0.53
MTHFD1-213ENST00000556284 SLC10A4Q96EP9 437 aa11.76□□□□□ -0.53
MTHFD1-213ENST00000556284 OTUD5Q96G74 571 aa11.76□□□□□ -0.53
MTHFD1-213ENST00000556284 ZNF274Q96GC6 653 aaPredicted RBP11.76□□□□□ -0.53
MTHFD1-213ENST00000556284 ZSCAN31Q96LW9 406 aaPredicted RBP11.76□□□□□ -0.53
MTHFD1-213ENST00000556284 KAT14Q9H8E8 782 aa11.76□□□□□ -0.53
MTHFD1-213ENST00000556284 LIMCH1Q9UPQ0 1083 aa11.76□□□□□ -0.53
MTHFD1-213ENST00000556284 SLC12A7Q9Y666 1083 aa11.76□□□□□ -0.53
MTHFD1-213ENST00000556284 SNCAIPQ9Y6H5 919 aa11.76□□□□□ -0.53
MTHFD1-213ENST00000556284 ZHX2Q9Y6X8 837 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms