RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 RRAGCQ9HB90 399 aa5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 NCOA5Q9HCD5 579 aaKnown RBP5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 APEX2Q9UBZ4 518 aa5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 MRPS23Q9Y3D9 190 aaKnown RBP5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 ZNF451Q9Y4E5 1061 aa5.67□□□□□ -1.5
SPTLC2-204ENST00000556264 A0A087X0B3 334 aa5.66□□□□□ -1.5
SPTLC2-204ENST00000556264 PRODHO43272 600 aa5.66□□□□□ -1.5
SPTLC2-204ENST00000556264 CBFA2T2O43439 604 aa5.66□□□□□ -1.5
SPTLC2-204ENST00000556264 PARNO95453 639 aaKnown RBP5.66□□□□□ -1.5
SPTLC2-204ENST00000556264 PDGFRBP09619 1106 aa5.66□□□□□ -1.5
SPTLC2-204ENST00000556264 DGKGP49619 791 aa5.66□□□□□ -1.5
SPTLC2-204ENST00000556264 EVA1CP58658 441 aa5.66□□□□□ -1.5
SPTLC2-204ENST00000556264 FNDC3BQ53EP0 1204 aaKnown RBP5.66□□□□□ -1.5
SPTLC2-204ENST00000556264 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.66□□□□□ -1.5
SPTLC2-204ENST00000556264 SMYD4Q8IYR2 804 aaPredicted RBP5.66□□□□□ -1.5
SPTLC2-204ENST00000556264 UBR7Q8N806 425 aa5.66□□□□□ -1.5
SPTLC2-204ENST00000556264 CLUHP3Q96NS8 147 aa5.66□□□□□ -1.5
SPTLC2-204ENST00000556264 FAM126AQ9BYI3 521 aaPredicted RBP5.66□□□□□ -1.5
SPTLC2-204ENST00000556264 MKRN2Q9H000 416 aaKnown RBP5.66□□□□□ -1.5
SPTLC2-204ENST00000556264 CAAP1Q9H8G2 361 aa5.66□□□□□ -1.5
SPTLC2-204ENST00000556264 G3BP2Q9UN86 482 aaKnown RBP5.66□□□□□ -1.5
SPTLC2-204ENST00000556264 ATP8A1Q9Y2Q0 1164 aa5.66□□□□□ -1.5
SPTLC2-204ENST00000556264 SUGT1Q9Y2Z0 365 aa5.66□□□□□ -1.5
SPTLC2-204ENST00000556264 PDE8AO60658 829 aa5.65□□□□□ -1.5
SPTLC2-204ENST00000556264 PPM1BO75688 479 aa5.65□□□□□ -1.5
SPTLC2-204ENST00000556264 TIAF1O95411 115 aa5.65□□□□□ -1.5
SPTLC2-204ENST00000556264 S100BP04271 92 aaPredicted RBP5.65□□□□□ -1.5
SPTLC2-204ENST00000556264 PABPC1P11940 636 aaKnown RBP5.65□□□□□ -1.5
SPTLC2-204ENST00000556264 HOXB4P17483 251 aaPredicted RBP5.65□□□□□ -1.5
SPTLC2-204ENST00000556264 POU3F3P20264 500 aaPredicted RBP5.65□□□□□ -1.5
SPTLC2-204ENST00000556264 STAT3P40763 770 aa5.65□□□□□ -1.5
SPTLC2-204ENST00000556264 GRIA2P42262 883 aa5.65□□□□□ -1.5
SPTLC2-204ENST00000556264 NBPF12Q5TAG4 269 aaPredicted RBP5.65□□□□□ -1.5
SPTLC2-204ENST00000556264 FDX2Q6P4F2 183 aa5.65□□□□□ -1.5
SPTLC2-204ENST00000556264 NSMFQ6X4W1 530 aa5.65□□□□□ -1.5
SPTLC2-204ENST00000556264 FERMT3Q86UX7 667 aa5.65□□□□□ -1.5
SPTLC2-204ENST00000556264 ZNF227Q86WZ6 799 aa5.65□□□□□ -1.5
SPTLC2-204ENST00000556264 ZNF513Q8N8E2 541 aaPredicted RBP5.65□□□□□ -1.5
SPTLC2-204ENST00000556264 PRPF38AQ8NAV1 312 aaKnown RBP5.65□□□□□ -1.5
SPTLC2-204ENST00000556264 PPP1R13LQ8WUF5 828 aa5.65□□□□□ -1.5
SPTLC2-204ENST00000556264 GBP3Q9H0R5 595 aa5.65□□□□□ -1.5
SPTLC2-204ENST00000556264 GSX1Q9H4S2 264 aaPredicted RBP5.65□□□□□ -1.5
SPTLC2-204ENST00000556264 HOMER2Q9NSB8 354 aa5.65□□□□□ -1.5
SPTLC2-204ENST00000556264 FAM105AQ9NUU6 356 aa5.65□□□□□ -1.5
SPTLC2-204ENST00000556264 PCOLCE2Q9UKZ9 415 aa5.65□□□□□ -1.5
SPTLC2-204ENST00000556264 ACTL7BQ9Y614 415 aa5.65□□□□□ -1.5
SPTLC2-204ENST00000556264 TBX1O43435 398 aa5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 FGFR1P11362 822 aa5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 SDSP20132 328 aa5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 CD247P20963 164 aa5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 SOX5P35711 763 aa5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 CDKN1CP49918 316 aaPredicted RBP5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 NFKB2Q00653 900 aa5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 AUHQ13825 339 aaKnown RBP5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 ANKRD39Q53RE8 183 aa5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 CT47A1Q5JQC4 288 aaPredicted RBP5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 CNNM4Q6P4Q7 775 aa5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 IGF2-ASQ6U949 168 aa5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 ARMCX6Q7L4S7 300 aa5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 DDX42Q86XP3 938 aaKnown RBP eCLIP5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 C7orf61Q8IZ16 206 aa5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 MFSD2AQ8NA29 543 aa5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 C2CD4AQ8NCU7 369 aaPredicted RBP5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 BVESQ8NE79 360 aa5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 WHAMMQ8TF30 809 aa5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 TRIM11Q96F44 468 aa5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 IER2Q9BTL4 223 aa5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 PLVAPQ9BX97 442 aa5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 MRPL4Q9BYD3 311 aaKnown RBP5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 MRPL18Q9H0U6 180 aaKnown RBP5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 TYW1Q9NV66 732 aaKnown RBP5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 CEP131Q9UPN4 1083 aa5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 AKT3Q9Y243 479 aa5.64□□□□□ -1.51
SPTLC2-204ENST00000556264 FAM229AH3BQW9 127 aa5.63□□□□□ -1.51
SPTLC2-204ENST00000556264 NOP56O00567 594 aaKnown RBP5.63□□□□□ -1.51
SPTLC2-204ENST00000556264 KCNQ2O43526 872 aa5.63□□□□□ -1.51
SPTLC2-204ENST00000556264 LRIG2O94898 1065 aa5.63□□□□□ -1.51
SPTLC2-204ENST00000556264 SUMO1P63165 101 aaKnown RBP5.63□□□□□ -1.51
SPTLC2-204ENST00000556264 TRIM28Q13263 835 aaKnown RBP5.63□□□□□ -1.51
SPTLC2-204ENST00000556264 ZNF787Q6DD87 383 aa5.63□□□□□ -1.51
SPTLC2-204ENST00000556264 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.63□□□□□ -1.51
SPTLC2-204ENST00000556264 CDH24Q86UP0 819 aa5.63□□□□□ -1.51
SPTLC2-204ENST00000556264 ADCY4Q8NFM4 1077 aa5.63□□□□□ -1.51
SPTLC2-204ENST00000556264 NEDD1Q8NHV4 660 aa5.63□□□□□ -1.51
SPTLC2-204ENST00000556264 OSBP2Q969R2 916 aa5.63□□□□□ -1.51
SPTLC2-204ENST00000556264 KREMEN1Q96MU8 473 aa5.63□□□□□ -1.51
SPTLC2-204ENST00000556264 GP6Q9HCN6 339 aa5.63□□□□□ -1.51
SPTLC2-204ENST00000556264 WHRNQ9P202 907 aa5.63□□□□□ -1.51
SPTLC2-204ENST00000556264 DNAJC25-GNG10A0A024R161 153 aa5.62□□□□□ -1.51
SPTLC2-204ENST00000556264 GSG1L2A8MUP6 293 aa5.62□□□□□ -1.51
SPTLC2-204ENST00000556264 CAPNS1P04632 268 aa5.62□□□□□ -1.51
SPTLC2-204ENST00000556264 RNF4P78317 190 aa5.62□□□□□ -1.51
SPTLC2-204ENST00000556264 ANKRD34AQ69YU3 496 aa5.62□□□□□ -1.51
SPTLC2-204ENST00000556264 RNF180Q86T96 592 aa5.62□□□□□ -1.51
SPTLC2-204ENST00000556264 LRRTM3Q86VH5 581 aa5.62□□□□□ -1.51
SPTLC2-204ENST00000556264 AGGF1Q8N302 714 aaeCLIP5.62□□□□□ -1.51
SPTLC2-204ENST00000556264 DNAJB8Q8NHS0 232 aa5.62□□□□□ -1.51
SPTLC2-204ENST00000556264 RIN3Q8TB24 985 aa5.62□□□□□ -1.51
SPTLC2-204ENST00000556264 VWCEQ96DN2 955 aa5.62□□□□□ -1.51
SPTLC2-204ENST00000556264 RCC1LQ96I51 464 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms