RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 WDR44Q5JSH3 913 aa8.8□□□□□ -1
ATXN3-236ENST00000556220 C15orf52Q6ZUT6 534 aaKnown RBP8.8□□□□□ -1
ATXN3-236ENST00000556220 ERO1BQ86YB8 467 aa8.8□□□□□ -1
ATXN3-236ENST00000556220 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.8□□□□□ -1
ATXN3-236ENST00000556220 TRIM22Q8IYM9 498 aa8.8□□□□□ -1
ATXN3-236ENST00000556220 GRIP2Q9C0E4 1043 aa8.8□□□□□ -1
ATXN3-236ENST00000556220 CUEDC1Q9NWM3 386 aaPredicted RBP8.8□□□□□ -1
ATXN3-236ENST00000556220 CPA4Q9UI42 421 aa8.8□□□□□ -1
ATXN3-236ENST00000556220 DYRK1BQ9Y463 629 aa8.8□□□□□ -1
ATXN3-236ENST00000556220 MYPNQ86TC9 1320 aa8.8□□□□□ -1
ATXN3-236ENST00000556220 IRS2Q9Y4H2 1338 aa8.8□□□□□ -1
ATXN3-236ENST00000556220 TFRCP02786 760 aaKnown RBP8.79□□□□□ -1
ATXN3-236ENST00000556220 FOXR1Q6PIV2 292 aa8.79□□□□□ -1
ATXN3-236ENST00000556220 MPHOSPH8Q99549 860 aa8.79□□□□□ -1
ATXN3-236ENST00000556220 TMEM39BQ9GZU3 492 aa8.79□□□□□ -1
ATXN3-236ENST00000556220 OSBPL3Q9H4L5 887 aa8.79□□□□□ -1
ATXN3-236ENST00000556220 TDRD3Q9H7E2 651 aaKnown RBP8.79□□□□□ -1
ATXN3-236ENST00000556220 SERPINA10Q9UK55 444 aa8.79□□□□□ -1
ATXN3-236ENST00000556220 SNCAIPQ9Y6H5 919 aa8.79□□□□□ -1
ATXN3-236ENST00000556220 TCP10L2B9ZVM9 353 aa8.78□□□□□ -1
ATXN3-236ENST00000556220 H7C1W4 665 aa8.78□□□□□ -1
ATXN3-236ENST00000556220 SNAP23O00161 211 aa8.78□□□□□ -1
ATXN3-236ENST00000556220 ARHGEF15O94989 841 aa8.78□□□□□ -1
ATXN3-236ENST00000556220 DDX58O95786 925 aaKnown RBP8.78□□□□□ -1
ATXN3-236ENST00000556220 IGKV5-2P06315 115 aa8.78□□□□□ -1
ATXN3-236ENST00000556220 PRKCZQ05513 592 aa8.78□□□□□ -1
ATXN3-236ENST00000556220 CHRNDQ07001 517 aa8.78□□□□□ -1
ATXN3-236ENST00000556220 PPIL2Q13356 520 aa8.78□□□□□ -1
ATXN3-236ENST00000556220 ANKRD23Q86SG2 305 aa8.78□□□□□ -1
ATXN3-236ENST00000556220 DZIP1LQ8IYY4 767 aaKnown RBP8.78□□□□□ -1
ATXN3-236ENST00000556220 WHAMMQ8TF30 809 aa8.78□□□□□ -1
ATXN3-236ENST00000556220 PRM3Q9NNZ6 103 aa8.78□□□□□ -1
ATXN3-236ENST00000556220 PRDM6Q9NQX0 595 aa8.78□□□□□ -1
ATXN3-236ENST00000556220 CEP126Q9P2H0 1117 aa8.78□□□□□ -1
ATXN3-236ENST00000556220 JAG2Q9Y219 1238 aa8.78□□□□□ -1
ATXN3-236ENST00000556220 LAMB1P07942 1786 aa8.78□□□□□ -1
ATXN3-236ENST00000556220 ZNF646O15015 1829 aaPredicted RBP8.77□□□□□ -1
ATXN3-236ENST00000556220 SPATA31C2B4DYI2 1134 aa8.77□□□□□ -1.01
ATXN3-236ENST00000556220 PDHXO00330 501 aa8.77□□□□□ -1.01
ATXN3-236ENST00000556220 CSF1RP07333 972 aa8.77□□□□□ -1.01
ATXN3-236ENST00000556220 TNNI2P48788 182 aa8.77□□□□□ -1.01
ATXN3-236ENST00000556220 FCGRTP55899 365 aa8.77□□□□□ -1.01
ATXN3-236ENST00000556220 POU4F2Q12837 409 aa8.77□□□□□ -1.01
ATXN3-236ENST00000556220 GAS6Q14393 721 aa8.77□□□□□ -1.01
ATXN3-236ENST00000556220 ZNF804AQ7Z570 1209 aa8.77□□□□□ -1.01
ATXN3-236ENST00000556220 NECAB2Q7Z6G3 386 aa8.77□□□□□ -1.01
ATXN3-236ENST00000556220 TMEM151AQ8N4L1 468 aa8.77□□□□□ -1.01
ATXN3-236ENST00000556220 ZKSCAN4Q969J2 545 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-236ENST00000556220 ZNF837Q96EG3 531 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-236ENST00000556220 PAWRQ96IZ0 340 aaKnown RBP8.77□□□□□ -1.01
ATXN3-236ENST00000556220 DEFB118Q96PH6 123 aa8.77□□□□□ -1.01
ATXN3-236ENST00000556220 PLA2G12BQ9BX93 195 aa8.77□□□□□ -1.01
ATXN3-236ENST00000556220 MAP3K2Q9Y2U5 619 aa8.77□□□□□ -1.01
ATXN3-236ENST00000556220 ADGRA2Q96PE1 1338 aa8.77□□□□□ -1.01
ATXN3-236ENST00000556220 MUC3AQ02505 3323 aa8.76□□□□□ -1.01
ATXN3-236ENST00000556220 PI4KAP2A4QPH2 592 aa8.76□□□□□ -1.01
ATXN3-236ENST00000556220 ADCY3O60266 1144 aa8.76□□□□□ -1.01
ATXN3-236ENST00000556220 TAF5LO75529 589 aa8.76□□□□□ -1.01
ATXN3-236ENST00000556220 PPATQ06203 517 aa8.76□□□□□ -1.01
ATXN3-236ENST00000556220 DBN1Q16643 649 aa8.76□□□□□ -1.01
ATXN3-236ENST00000556220 KSR2Q6VAB6 950 aa8.76□□□□□ -1.01
ATXN3-236ENST00000556220 RIPOR1Q6ZS17 1223 aa8.76□□□□□ -1.01
ATXN3-236ENST00000556220 TDHQ8IZJ6 230 aa8.76□□□□□ -1.01
ATXN3-236ENST00000556220 PI4KAP1Q8N8J0 262 aa8.76□□□□□ -1.01
ATXN3-236ENST00000556220 WRNIP1Q96S55 665 aa8.76□□□□□ -1.01
ATXN3-236ENST00000556220 ARHGEF10LQ9HCE6 1279 aa8.76□□□□□ -1.01
ATXN3-236ENST00000556220 PAK6Q9NQU5 681 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-236ENST00000556220 MBIPQ9NS73 344 aa8.76□□□□□ -1.01
ATXN3-236ENST00000556220 ZMYND8Q9ULU4 1186 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-236ENST00000556220 GABRQQ9UN88 632 aa8.76□□□□□ -1.01
ATXN3-236ENST00000556220 TTF2Q9UNY4 1162 aaKnown RBP8.76□□□□□ -1.01
ATXN3-236ENST00000556220 FAM205AQ6ZU69 1335 aa8.76□□□□□ -1.01
ATXN3-236ENST00000556220 ELL2O00472 640 aaPredicted RBP8.75□□□□□ -1.01
ATXN3-236ENST00000556220 GDF11O95390 407 aa8.75□□□□□ -1.01
ATXN3-236ENST00000556220 INHAP05111 366 aa8.75□□□□□ -1.01
ATXN3-236ENST00000556220 BCRP11274 1271 aa8.75□□□□□ -1.01
ATXN3-236ENST00000556220 MAGEA10P43363 369 aaPredicted RBP8.75□□□□□ -1.01
ATXN3-236ENST00000556220 FLT3LGP49771 235 aa8.75□□□□□ -1.01
ATXN3-236ENST00000556220 TPRNQ4KMQ1 711 aa8.75□□□□□ -1.01
ATXN3-236ENST00000556220 MFSD14BQ5SR56 506 aa8.75□□□□□ -1.01
ATXN3-236ENST00000556220 C7orf61Q8IZ16 206 aa8.75□□□□□ -1.01
ATXN3-236ENST00000556220 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.75□□□□□ -1.01
ATXN3-236ENST00000556220 KCNH4Q9UQ05 1017 aa8.75□□□□□ -1.01
ATXN3-236ENST00000556220 RPTORQ8N122 1335 aa8.75□□□□□ -1.01
ATXN3-236ENST00000556220 ANKRD18BA2A2Z9 1011 aa8.74□□□□□ -1.01
ATXN3-236ENST00000556220 NEURL1BA8MQ27 555 aa8.74□□□□□ -1.01
ATXN3-236ENST00000556220 ZNF853P0CG23 659 aa8.74□□□□□ -1.01
ATXN3-236ENST00000556220 ELNP15502 786 aa8.74□□□□□ -1.01
ATXN3-236ENST00000556220 CRKP46108 304 aa8.74□□□□□ -1.01
ATXN3-236ENST00000556220 NEXNQ0ZGT2 675 aa8.74□□□□□ -1.01
ATXN3-236ENST00000556220 IRF5Q13568 498 aa8.74□□□□□ -1.01
ATXN3-236ENST00000556220 MOGSQ13724 837 aa8.74□□□□□ -1.01
ATXN3-236ENST00000556220 CWF19L2Q2TBE0 894 aaKnown RBP8.74□□□□□ -1.01
ATXN3-236ENST00000556220 CCDC30Q5VVM6 783 aa8.74□□□□□ -1.01
ATXN3-236ENST00000556220 FAM109BQ6ICB4 259 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-236ENST00000556220 LYPD4Q6UWN0 246 aa8.74□□□□□ -1.01
ATXN3-236ENST00000556220 TAS1R3Q7RTX0 852 aa8.74□□□□□ -1.01
ATXN3-236ENST00000556220 UBE3BQ7Z3V4 1068 aa8.74□□□□□ -1.01
ATXN3-236ENST00000556220 CCER1Q8TC90 406 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-236ENST00000556220 DIS3LQ8TF46 1054 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms