RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 TBC1D2Q9BYX2 928 aa13.49□□□□□ -0.25
GABRB3-210ENST00000556166 UPF2Q9HAU5 1272 aaKnown RBP13.49□□□□□ -0.25
GABRB3-210ENST00000556166 WDR19Q8NEZ3 1342 aa13.48□□□□□ -0.25
GABRB3-210ENST00000556166 DOCK1Q14185 1865 aa13.48□□□□□ -0.25
GABRB3-210ENST00000556166 TESPA1A2RU30 521 aaPredicted RBP13.48□□□□□ -0.25
GABRB3-210ENST00000556166 TOP1P11387 765 aaKnown RBP13.48□□□□□ -0.25
GABRB3-210ENST00000556166 KIF23Q02241 960 aaPredicted RBP13.48□□□□□ -0.25
GABRB3-210ENST00000556166 SNAPC2Q13487 334 aa13.48□□□□□ -0.25
GABRB3-210ENST00000556166 GPAT2Q6NUI2 795 aa13.48□□□□□ -0.25
GABRB3-210ENST00000556166 MTA3Q9BTC8 594 aa13.48□□□□□ -0.25
GABRB3-210ENST00000556166 ARHGEF10LQ9HCE6 1279 aa13.48□□□□□ -0.25
GABRB3-210ENST00000556166 CYP46A1Q9Y6A2 500 aa13.48□□□□□ -0.25
GABRB3-210ENST00000556166 WDR33Q9C0J8 1336 aaKnown RBP13.48□□□□□ -0.25
GABRB3-210ENST00000556166 C19orf81C9J6K1 198 aa13.47□□□□□ -0.25
GABRB3-210ENST00000556166 F5H6K3 240 aa13.47□□□□□ -0.25
GABRB3-210ENST00000556166 NDUFB10O96000 172 aa13.47□□□□□ -0.25
GABRB3-210ENST00000556166 GTF2A2P52657 109 aa13.47□□□□□ -0.25
GABRB3-210ENST00000556166 KLRC3Q07444 240 aa13.47□□□□□ -0.25
GABRB3-210ENST00000556166 TOB2Q14106 344 aaPredicted RBP13.47□□□□□ -0.25
GABRB3-210ENST00000556166 CCDC178Q5BJE1 867 aa13.47□□□□□ -0.25
GABRB3-210ENST00000556166 TREML2Q5T2D2 321 aa13.47□□□□□ -0.25
GABRB3-210ENST00000556166 USP17L2Q6R6M4 530 aa13.47□□□□□ -0.25
GABRB3-210ENST00000556166 Q6ZUG5 572 aa13.47□□□□□ -0.25
GABRB3-210ENST00000556166 SPICE1Q8N0Z3 855 aa13.47□□□□□ -0.25
GABRB3-210ENST00000556166 TMEM87BQ96K49 555 aa13.47□□□□□ -0.25
GABRB3-210ENST00000556166 FEZ1Q99689 392 aa13.47□□□□□ -0.25
GABRB3-210ENST00000556166 LARP6Q9BRS8 491 aaKnown RBP13.47□□□□□ -0.25
GABRB3-210ENST00000556166 VCPKMTQ9H867 229 aa13.47□□□□□ -0.25
GABRB3-210ENST00000556166 BRPF3Q9ULD4 1205 aa13.47□□□□□ -0.25
GABRB3-210ENST00000556166 PHIPQ8WWQ0 1821 aa13.47□□□□□ -0.25
GABRB3-210ENST00000556166 CETPP11597 493 aa13.46□□□□□ -0.25
GABRB3-210ENST00000556166 LIFRP42702 1097 aa13.46□□□□□ -0.25
GABRB3-210ENST00000556166 WTAPQ15007 396 aa13.46□□□□□ -0.25
GABRB3-210ENST00000556166 IFIT1BQ5T764 474 aaKnown RBP13.46□□□□□ -0.25
GABRB3-210ENST00000556166 FBXL16Q8N461 479 aa13.46□□□□□ -0.25
GABRB3-210ENST00000556166 GMCL1P1Q8NEA9 526 aa13.46□□□□□ -0.25
GABRB3-210ENST00000556166 C12orf42Q96LP6 360 aa13.46□□□□□ -0.25
GABRB3-210ENST00000556166 NUP88Q99567 741 aaPredicted RBP13.46□□□□□ -0.25
GABRB3-210ENST00000556166 AGXT2Q9BYV1 514 aa13.46□□□□□ -0.25
GABRB3-210ENST00000556166 PDRG1Q9NUG6 133 aa13.46□□□□□ -0.25
GABRB3-210ENST00000556166 ATAD5Q96QE3 1844 aa13.45□□□□□ -0.26
GABRB3-210ENST00000556166 CCL15-CCL14A0A0B4J2E2 113 aa13.45□□□□□ -0.26
GABRB3-210ENST00000556166 BTBD19C9JJ37 291 aa13.45□□□□□ -0.26
GABRB3-210ENST00000556166 IGF2BP3O00425 579 aaKnown RBP eCLIP13.45□□□□□ -0.26
GABRB3-210ENST00000556166 TM4SF4P48230 202 aa13.45□□□□□ -0.26
GABRB3-210ENST00000556166 NEK4P51957 841 aa13.45□□□□□ -0.26
GABRB3-210ENST00000556166 NOGQ13253 232 aa13.45□□□□□ -0.26
GABRB3-210ENST00000556166 SART3Q15020 963 aaKnown RBP13.45□□□□□ -0.26
GABRB3-210ENST00000556166 CCL15Q16663 113 aa13.45□□□□□ -0.26
GABRB3-210ENST00000556166 PPP4R3BQ5MIZ7 849 aa13.45□□□□□ -0.26
GABRB3-210ENST00000556166 SLFN13Q68D06 897 aa13.45□□□□□ -0.26
GABRB3-210ENST00000556166 GADL1Q6ZQY3 521 aa13.45□□□□□ -0.26
GABRB3-210ENST00000556166 PNMA1Q8ND90 353 aa13.45□□□□□ -0.26
GABRB3-210ENST00000556166 ALDH8A1Q9H2A2 487 aaPredicted RBP13.45□□□□□ -0.26
GABRB3-210ENST00000556166 SYNPO2Q9UMS6 1093 aa13.45□□□□□ -0.26
GABRB3-210ENST00000556166 MTMR7Q9Y216 660 aa13.45□□□□□ -0.26
GABRB3-210ENST00000556166 MANSC4A6NHS7 340 aaPredicted RBP13.45□□□□□ -0.26
GABRB3-210ENST00000556166 VCAM1P19320 739 aa13.45□□□□□ -0.26
GABRB3-210ENST00000556166 USP14P54578 494 aa13.45□□□□□ -0.26
GABRB3-210ENST00000556166 APOBRQ0VD83 1088 aa13.45□□□□□ -0.26
GABRB3-210ENST00000556166 TROAPQ12815 778 aa13.45□□□□□ -0.26
GABRB3-210ENST00000556166 SGMS1Q86VZ5 419 aa13.45□□□□□ -0.26
GABRB3-210ENST00000556166 FAM43AQ8N2R8 423 aa13.45□□□□□ -0.26
GABRB3-210ENST00000556166 BRF1Q92994 677 aa13.45□□□□□ -0.26
GABRB3-210ENST00000556166 MYL10Q9BUA6 226 aa13.45□□□□□ -0.26
GABRB3-210ENST00000556166 SH2D4AQ9H788 454 aa13.45□□□□□ -0.26
GABRB3-210ENST00000556166 KAT14Q9H8E8 782 aa13.45□□□□□ -0.26
GABRB3-210ENST00000556166 CEP350Q5VT06 3117 aa13.44□□□□□ -0.26
GABRB3-210ENST00000556166 ERICH2A1L162 156 aa13.44□□□□□ -0.26
GABRB3-210ENST00000556166 RAD21O60216 631 aa13.44□□□□□ -0.26
GABRB3-210ENST00000556166 SNHG28P0DPA3 235 aa13.44□□□□□ -0.26
GABRB3-210ENST00000556166 PDHBP11177 359 aa13.44□□□□□ -0.26
GABRB3-210ENST00000556166 FAM83BQ5T0W9 1011 aa13.44□□□□□ -0.26
GABRB3-210ENST00000556166 POTEEQ6S8J3 1075 aa13.44□□□□□ -0.26
GABRB3-210ENST00000556166 FASTKD5Q7L8L6 764 aaKnown RBP13.44□□□□□ -0.26
GABRB3-210ENST00000556166 RAB11FIP4Q86YS3 637 aa13.44□□□□□ -0.26
GABRB3-210ENST00000556166 TMTC2Q8N394 836 aa13.44□□□□□ -0.26
GABRB3-210ENST00000556166 PROCA1Q8NCQ7 364 aaPredicted RBP13.44□□□□□ -0.26
GABRB3-210ENST00000556166 GMCL1Q96IK5 515 aa13.44□□□□□ -0.26
GABRB3-210ENST00000556166 GOPCQ9HD26 462 aa13.44□□□□□ -0.26
GABRB3-210ENST00000556166 TMOD4Q9NZQ9 345 aa13.44□□□□□ -0.26
GABRB3-210ENST00000556166 RBM19Q9Y4C8 960 aaKnown RBP13.44□□□□□ -0.26
GABRB3-210ENST00000556166 MYH8P13535 1937 aa13.44□□□□□ -0.26
GABRB3-210ENST00000556166 MAP2K2P36507 400 aa13.43□□□□□ -0.26
GABRB3-210ENST00000556166 AK2P54819 239 aa13.43□□□□□ -0.26
GABRB3-210ENST00000556166 EVCP57679 992 aa13.43□□□□□ -0.26
GABRB3-210ENST00000556166 TTBK2Q6IQ55 1244 aa13.43□□□□□ -0.26
GABRB3-210ENST00000556166 NFXL1Q6ZNB6 911 aa13.43□□□□□ -0.26
GABRB3-210ENST00000556166 IFNL1Q8IU54 200 aa13.43□□□□□ -0.26
GABRB3-210ENST00000556166 ZNF654Q8IZM8 581 aa13.43□□□□□ -0.26
GABRB3-210ENST00000556166 LPAR1Q92633 364 aa13.43□□□□□ -0.26
GABRB3-210ENST00000556166 RPAP3Q9H6T3 665 aaPredicted RBP13.43□□□□□ -0.26
GABRB3-210ENST00000556166 AGTPBP1Q9UPW5 1226 aa13.43□□□□□ -0.26
GABRB3-210ENST00000556166 HPS5Q9UPZ3 1129 aa13.43□□□□□ -0.26
GABRB3-210ENST00000556166 KLF18A0A0U1RQI7 1052 aa13.42□□□□□ -0.26
GABRB3-210ENST00000556166 PDHXO00330 501 aa13.42□□□□□ -0.26
GABRB3-210ENST00000556166 CD2BP2O95400 341 aaKnown RBP13.42□□□□□ -0.26
GABRB3-210ENST00000556166 GOLGA8HP0CJ92 632 aa13.42□□□□□ -0.26
GABRB3-210ENST00000556166 RXRAP19793 462 aa13.42□□□□□ -0.26
GABRB3-210ENST00000556166 HOXA7P31268 230 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms