RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 CACNB2Q08289 660 aaPredicted RBP7.15□□□□□ -1.26
PRKCH-220ENST00000556164 SLFN5Q08AF3 891 aa7.15□□□□□ -1.26
PRKCH-220ENST00000556164 LRRC26Q2I0M4 334 aa7.15□□□□□ -1.26
PRKCH-220ENST00000556164 DNAJC14Q6Y2X3 702 aaPredicted RBP7.15□□□□□ -1.26
PRKCH-220ENST00000556164 TRMT44Q8IYL2 757 aaKnown RBP7.15□□□□□ -1.26
PRKCH-220ENST00000556164 CRACR2BQ8N4Y2 399 aaPredicted RBP7.15□□□□□ -1.26
PRKCH-220ENST00000556164 PAGR1Q9BTK6 254 aa7.15□□□□□ -1.26
PRKCH-220ENST00000556164 WDR18Q9BV38 432 aa7.15□□□□□ -1.26
PRKCH-220ENST00000556164 API5Q9BZZ5 524 aaKnown RBP7.15□□□□□ -1.26
PRKCH-220ENST00000556164 CWC22Q9HCG8 908 aaKnown RBP7.15□□□□□ -1.26
PRKCH-220ENST00000556164 TXNRD2Q9NNW7 524 aa7.15□□□□□ -1.26
PRKCH-220ENST00000556164 AATFQ9NY61 560 aaKnown RBP eCLIP7.15□□□□□ -1.26
PRKCH-220ENST00000556164 LRP2BPQ9P2M1 347 aa7.15□□□□□ -1.26
PRKCH-220ENST00000556164 PI4KBQ9UBF8 816 aa7.15□□□□□ -1.26
PRKCH-220ENST00000556164 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.15□□□□□ -1.26
PRKCH-220ENST00000556164 A0A0C4DFX4 3053 aa7.14□□□□□ -1.27
PRKCH-220ENST00000556164 C19orf81C9J6K1 198 aa7.14□□□□□ -1.27
PRKCH-220ENST00000556164 USP17L10C9JJH3 530 aa7.14□□□□□ -1.27
PRKCH-220ENST00000556164 OATP04181 439 aa7.14□□□□□ -1.27
PRKCH-220ENST00000556164 COL6A1P12109 1028 aa7.14□□□□□ -1.27
PRKCH-220ENST00000556164 MYH8P13535 1937 aa7.14□□□□□ -1.27
PRKCH-220ENST00000556164 PLCG2P16885 1265 aa7.14□□□□□ -1.27
PRKCH-220ENST00000556164 FLT1P17948 1338 aa7.14□□□□□ -1.27
PRKCH-220ENST00000556164 VAMP1P23763 118 aa7.14□□□□□ -1.27
PRKCH-220ENST00000556164 ARID4AP29374 1257 aaPredicted RBP7.14□□□□□ -1.27
PRKCH-220ENST00000556164 HOXA7P31268 230 aaPredicted RBP7.14□□□□□ -1.27
PRKCH-220ENST00000556164 RGS2P41220 211 aa7.14□□□□□ -1.27
PRKCH-220ENST00000556164 MCAMP43121 646 aa7.14□□□□□ -1.27
PRKCH-220ENST00000556164 ERVK-9P63128 1117 aa7.14□□□□□ -1.27
PRKCH-220ENST00000556164 ERVK-24P63145 666 aa7.14□□□□□ -1.27
PRKCH-220ENST00000556164 RLFQ13129 1914 aa7.14□□□□□ -1.27
PRKCH-220ENST00000556164 CCL14Q16627 93 aa7.14□□□□□ -1.27
PRKCH-220ENST00000556164 SHROOM1Q2M3G4 852 aaPredicted RBP7.14□□□□□ -1.27
PRKCH-220ENST00000556164 NAA16Q6N069 864 aaPredicted RBP7.14□□□□□ -1.27
PRKCH-220ENST00000556164 GPR142Q7Z601 462 aa7.14□□□□□ -1.27
PRKCH-220ENST00000556164 PLEKHH3Q7Z736 793 aa7.14□□□□□ -1.27
PRKCH-220ENST00000556164 MAPKAPK5Q8IW41 473 aa7.14□□□□□ -1.27
PRKCH-220ENST00000556164 GTF3C2Q8WUA4 911 aaPredicted RBP7.14□□□□□ -1.27
PRKCH-220ENST00000556164 TGFBRAP1Q8WUH2 860 aa7.14□□□□□ -1.27
PRKCH-220ENST00000556164 DDX12PQ92771 950 aa7.14□□□□□ -1.27
PRKCH-220ENST00000556164 CDCA7LQ96GN5 454 aa7.14□□□□□ -1.27
PRKCH-220ENST00000556164 APBA2Q99767 749 aa7.14□□□□□ -1.27
PRKCH-220ENST00000556164 PORCNQ9H237 461 aa7.14□□□□□ -1.27
PRKCH-220ENST00000556164 DHX36Q9H2U1 1008 aaKnown RBP7.14□□□□□ -1.27
PRKCH-220ENST00000556164 DNAJC18Q9H819 358 aa7.14□□□□□ -1.27
PRKCH-220ENST00000556164 ZBTB21Q9ULJ3 1066 aa7.14□□□□□ -1.27
PRKCH-220ENST00000556164 CUL9Q8IWT3 2517 aa7.13□□□□□ -1.27
PRKCH-220ENST00000556164 CARNS1A5YM72 827 aa7.13□□□□□ -1.27
PRKCH-220ENST00000556164 PALM3A6NDB9 673 aaPredicted RBP7.13□□□□□ -1.27
PRKCH-220ENST00000556164 BAG3O95817 575 aa7.13□□□□□ -1.27
PRKCH-220ENST00000556164 GNAI3P08754 354 aa7.13□□□□□ -1.27
PRKCH-220ENST00000556164 UQCRFS1P1P0C7P4 283 aa7.13□□□□□ -1.27
PRKCH-220ENST00000556164 ZNF16P17020 682 aaPredicted RBP7.13□□□□□ -1.27
PRKCH-220ENST00000556164 JAG1P78504 1218 aa7.13□□□□□ -1.27
PRKCH-220ENST00000556164 ZYXQ15942 572 aaKnown RBP7.13□□□□□ -1.27
PRKCH-220ENST00000556164 TSR1Q2NL82 804 aaKnown RBP7.13□□□□□ -1.27
PRKCH-220ENST00000556164 Q3C1V9 767 aa7.13□□□□□ -1.27
PRKCH-220ENST00000556164 MORN1Q5T089 497 aa7.13□□□□□ -1.27
PRKCH-220ENST00000556164 WDR78Q5VTH9 848 aa7.13□□□□□ -1.27
PRKCH-220ENST00000556164 LHX8Q68G74 356 aa7.13□□□□□ -1.27
PRKCH-220ENST00000556164 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.13□□□□□ -1.27
PRKCH-220ENST00000556164 USP6NLQ92738 828 aa7.13□□□□□ -1.27
PRKCH-220ENST00000556164 FAM161BQ96MY7 647 aa7.13□□□□□ -1.27
PRKCH-220ENST00000556164 FEZ1Q99689 392 aa7.13□□□□□ -1.27
PRKCH-220ENST00000556164 LBHD1Q9BQE6 289 aaPredicted RBP7.13□□□□□ -1.27
PRKCH-220ENST00000556164 COL25A1Q9BXS0 654 aaPredicted RBP7.13□□□□□ -1.27
PRKCH-220ENST00000556164 SENP6Q9GZR1 1112 aaPredicted RBP7.13□□□□□ -1.27
PRKCH-220ENST00000556164 NPDC1Q9NQX5 325 aaPredicted RBP7.13□□□□□ -1.27
PRKCH-220ENST00000556164 RBPJLQ9UBG7 517 aa7.13□□□□□ -1.27
PRKCH-220ENST00000556164 LIMD1Q9UGP4 676 aa7.13□□□□□ -1.27
PRKCH-220ENST00000556164 SAP30BPQ9UHR5 308 aaKnown RBP7.13□□□□□ -1.27
PRKCH-220ENST00000556164 PALD1Q9ULE6 856 aa7.13□□□□□ -1.27
PRKCH-220ENST00000556164 NDUFB9Q9Y6M9 179 aa7.13□□□□□ -1.27
PRKCH-220ENST00000556164 ZNFX1Q9P2E3 1918 aaKnown RBP7.13□□□□□ -1.27
PRKCH-220ENST00000556164 PITPNM1O00562 1244 aa7.12□□□□□ -1.27
PRKCH-220ENST00000556164 GLRX3O76003 335 aaKnown RBP7.12□□□□□ -1.27
PRKCH-220ENST00000556164 HLA-DOAP06340 250 aa7.12□□□□□ -1.27
PRKCH-220ENST00000556164 CT47B1P0C2W7 299 aaPredicted RBP7.12□□□□□ -1.27
PRKCH-220ENST00000556164 CNGA1P29973 690 aa7.12□□□□□ -1.27
PRKCH-220ENST00000556164 ATN1P54259 1190 aaPredicted RBP7.12□□□□□ -1.27
PRKCH-220ENST00000556164 CCNA1P78396 465 aa7.12□□□□□ -1.27
PRKCH-220ENST00000556164 G3BP1Q13283 466 aaKnown RBP eCLIP7.12□□□□□ -1.27
PRKCH-220ENST00000556164 MTX1Q13505 466 aa7.12□□□□□ -1.27
PRKCH-220ENST00000556164 TTC39AQ5SRH9 613 aa7.12□□□□□ -1.27
PRKCH-220ENST00000556164 ZNF697Q5TEC3 545 aa7.12□□□□□ -1.27
PRKCH-220ENST00000556164 MFSD14CQ5VZR4 134 aa7.12□□□□□ -1.27
PRKCH-220ENST00000556164 USP17L2Q6R6M4 530 aa7.12□□□□□ -1.27
PRKCH-220ENST00000556164 ADGRA1Q86SQ6 560 aa7.12□□□□□ -1.27
PRKCH-220ENST00000556164 FOXP4Q8IVH2 680 aaPredicted RBP7.12□□□□□ -1.27
PRKCH-220ENST00000556164 GUCD1Q96NT3 240 aa7.12□□□□□ -1.27
PRKCH-220ENST00000556164 GINM1Q9NU53 330 aa7.12□□□□□ -1.27
PRKCH-220ENST00000556164 PRKAG2Q9UGJ0 569 aa7.12□□□□□ -1.27
PRKCH-220ENST00000556164 NAV1Q8NEY1 1877 aa7.12□□□□□ -1.27
PRKCH-220ENST00000556164 DNAH12Q6ZR08 3092 aa7.12□□□□□ -1.27
PRKCH-220ENST00000556164 UNC80Q8N2C7 3258 aa7.12□□□□□ -1.27
PRKCH-220ENST00000556164 SMCHD1A6NHR9 2005 aa7.11□□□□□ -1.27
PRKCH-220ENST00000556164 ZNF236Q9UL36 1845 aa7.11□□□□□ -1.27
PRKCH-220ENST00000556164 PNMA6EA0A0J9YXQ4 647 aa7.11□□□□□ -1.27
PRKCH-220ENST00000556164 USP17L15C9J2P7 530 aa7.11□□□□□ -1.27
PRKCH-220ENST00000556164 USP17L13C9JLJ4 530 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms