RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 ELNP15502 786 aa7.69□□□□□ -1.18
TMEM260-209ENST00000556079 MX1P20591 662 aa7.69□□□□□ -1.18
TMEM260-209ENST00000556079 ABCB5Q2M3G0 1257 aa7.69□□□□□ -1.18
TMEM260-209ENST00000556079 TATDN1Q6P1N9 297 aa7.69□□□□□ -1.18
TMEM260-209ENST00000556079 CTR9Q6PD62 1173 aa7.69□□□□□ -1.18
TMEM260-209ENST00000556079 SIAH1Q8IUQ4 282 aa7.69□□□□□ -1.18
TMEM260-209ENST00000556079 FOXP4Q8IVH2 680 aaPredicted RBP7.69□□□□□ -1.18
TMEM260-209ENST00000556079 KBTBD3Q8NAB2 608 aa7.69□□□□□ -1.18
TMEM260-209ENST00000556079 NKX2-3Q8TAU0 364 aa7.69□□□□□ -1.18
TMEM260-209ENST00000556079 DPF3Q92784 378 aa7.69□□□□□ -1.18
TMEM260-209ENST00000556079 CHMP4CQ96CF2 233 aa7.69□□□□□ -1.18
TMEM260-209ENST00000556079 STRBPQ96SI9 672 aaKnown RBP7.69□□□□□ -1.18
TMEM260-209ENST00000556079 PARK7Q99497 189 aaKnown RBP7.69□□□□□ -1.18
TMEM260-209ENST00000556079 P2RX7Q99572 595 aaKnown RBP7.69□□□□□ -1.18
TMEM260-209ENST00000556079 INCENPQ9NQS7 918 aa7.69□□□□□ -1.18
TMEM260-209ENST00000556079 RBM27Q9P2N5 1060 aaKnown RBP7.69□□□□□ -1.18
TMEM260-209ENST00000556079 SERPINB13Q9UIV8 391 aa7.69□□□□□ -1.18
TMEM260-209ENST00000556079 VCANP13611 3396 aa7.68□□□□□ -1.18
TMEM260-209ENST00000556079 RNF113AO15541 343 aaKnown RBP7.68□□□□□ -1.18
TMEM260-209ENST00000556079 GPAA1O43292 621 aa7.68□□□□□ -1.18
TMEM260-209ENST00000556079 PRDM1O75626 825 aa7.68□□□□□ -1.18
TMEM260-209ENST00000556079 CNMDO75829 334 aa7.68□□□□□ -1.18
TMEM260-209ENST00000556079 FMNL1O95466 1100 aaPredicted RBP7.68□□□□□ -1.18
TMEM260-209ENST00000556079 PDE4AP27815 886 aa7.68□□□□□ -1.18
TMEM260-209ENST00000556079 BACE1P56817 501 aa7.68□□□□□ -1.18
TMEM260-209ENST00000556079 TRIM32Q13049 653 aa7.68□□□□□ -1.18
TMEM260-209ENST00000556079 HDAC1Q13547 482 aaPredicted RBP7.68□□□□□ -1.18
TMEM260-209ENST00000556079 KIF22Q14807 665 aa7.68□□□□□ -1.18
TMEM260-209ENST00000556079 UBE3CQ15386 1083 aa7.68□□□□□ -1.18
TMEM260-209ENST00000556079 CERKLQ49MI3 558 aaPredicted RBP7.68□□□□□ -1.18
TMEM260-209ENST00000556079 SH3D19Q5HYK7 790 aa7.68□□□□□ -1.18
TMEM260-209ENST00000556079 C12orf60Q5U649 245 aa7.68□□□□□ -1.18
TMEM260-209ENST00000556079 VPS53Q5VIR6 699 aa7.68□□□□□ -1.18
TMEM260-209ENST00000556079 FASTKD5Q7L8L6 764 aaKnown RBP7.68□□□□□ -1.18
TMEM260-209ENST00000556079 RASGRP2Q7LDG7 609 aa7.68□□□□□ -1.18
TMEM260-209ENST00000556079 SMCR8Q8TEV9 937 aaPredicted RBP7.68□□□□□ -1.18
TMEM260-209ENST00000556079 FSD1Q9BTV5 496 aa7.68□□□□□ -1.18
TMEM260-209ENST00000556079 WDR18Q9BV38 432 aa7.68□□□□□ -1.18
TMEM260-209ENST00000556079 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.68□□□□□ -1.18
TMEM260-209ENST00000556079 EHD4Q9H223 541 aa7.68□□□□□ -1.18
TMEM260-209ENST00000556079 MYPNQ86TC9 1320 aa7.68□□□□□ -1.18
TMEM260-209ENST00000556079 MYH4Q9Y623 1939 aa7.68□□□□□ -1.18
TMEM260-209ENST00000556079 A0A0G2JMZ2 1700 aa7.67□□□□□ -1.18
TMEM260-209ENST00000556079 A0A0D9SFI3 127 aa7.67□□□□□ -1.18
TMEM260-209ENST00000556079 USP17L10C9JJH3 530 aa7.67□□□□□ -1.18
TMEM260-209ENST00000556079 ASNSP08243 561 aa7.67□□□□□ -1.18
TMEM260-209ENST00000556079 VCAM1P19320 739 aa7.67□□□□□ -1.18
TMEM260-209ENST00000556079 CDK8P49336 464 aa7.67□□□□□ -1.18
TMEM260-209ENST00000556079 PDE1AP54750 535 aa7.67□□□□□ -1.18
TMEM260-209ENST00000556079 Q3C1V9 767 aa7.67□□□□□ -1.18
TMEM260-209ENST00000556079 TTC6Q86TZ1 520 aa7.67□□□□□ -1.18
TMEM260-209ENST00000556079 SPICE1Q8N0Z3 855 aa7.67□□□□□ -1.18
TMEM260-209ENST00000556079 PROCA1Q8NCQ7 364 aaPredicted RBP7.67□□□□□ -1.18
TMEM260-209ENST00000556079 FAM227BQ96M60 508 aa7.67□□□□□ -1.18
TMEM260-209ENST00000556079 FEZ1Q99689 392 aa7.67□□□□□ -1.18
TMEM260-209ENST00000556079 PAGR1Q9BTK6 254 aa7.67□□□□□ -1.18
TMEM260-209ENST00000556079 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.67□□□□□ -1.18
TMEM260-209ENST00000556079 PORCNQ9H237 461 aa7.67□□□□□ -1.18
TMEM260-209ENST00000556079 ZCCHC17Q9NP64 241 aaKnown RBP7.67□□□□□ -1.18
TMEM260-209ENST00000556079 RBPJLQ9UBG7 517 aa7.67□□□□□ -1.18
TMEM260-209ENST00000556079 SRRDQ9UH36 339 aa7.67□□□□□ -1.18
TMEM260-209ENST00000556079 C2orf72A6NCS6 295 aa7.66□□□□□ -1.18
TMEM260-209ENST00000556079 MINDY4BA8MYZ0 360 aa7.66□□□□□ -1.18
TMEM260-209ENST00000556079 CCL5P13501 91 aa7.66□□□□□ -1.18
TMEM260-209ENST00000556079 GRK4P32298 578 aa7.66□□□□□ -1.18
TMEM260-209ENST00000556079 HERVK_113P62684 666 aa7.66□□□□□ -1.18
TMEM260-209ENST00000556079 ATP2B2Q01814 1243 aa7.66□□□□□ -1.18
TMEM260-209ENST00000556079 CTDSPL2Q05D32 466 aa7.66□□□□□ -1.18
TMEM260-209ENST00000556079 NMIQ13287 307 aaPredicted RBP7.66□□□□□ -1.18
TMEM260-209ENST00000556079 ZMYM1Q5SVZ6 1142 aa7.66□□□□□ -1.18
TMEM260-209ENST00000556079 USP17L2Q6R6M4 530 aa7.66□□□□□ -1.18
TMEM260-209ENST00000556079 C16orf86Q6ZW13 317 aa7.66□□□□□ -1.18
TMEM260-209ENST00000556079 UBE2Q1Q7Z7E8 422 aa7.66□□□□□ -1.18
TMEM260-209ENST00000556079 ZNF589Q86UQ0 364 aaPredicted RBP7.66□□□□□ -1.18
TMEM260-209ENST00000556079 SMC5Q8IY18 1101 aa7.66□□□□□ -1.18
TMEM260-209ENST00000556079 RAET1EQ8TD07 263 aa7.66□□□□□ -1.18
TMEM260-209ENST00000556079 APPBP2Q92624 585 aa7.66□□□□□ -1.18
TMEM260-209ENST00000556079 GPATCH3Q96I76 525 aa7.66□□□□□ -1.18
TMEM260-209ENST00000556079 HS3ST6Q96QI5 342 aa7.66□□□□□ -1.18
TMEM260-209ENST00000556079 NUP88Q99567 741 aaPredicted RBP7.66□□□□□ -1.18
TMEM260-209ENST00000556079 RPAP3Q9H6T3 665 aaPredicted RBP7.66□□□□□ -1.18
TMEM260-209ENST00000556079 AS3MTQ9HBK9 375 aa7.66□□□□□ -1.18
TMEM260-209ENST00000556079 TMOD4Q9NZQ9 345 aa7.66□□□□□ -1.18
TMEM260-209ENST00000556079 BTBD7Q9P203 1132 aa7.66□□□□□ -1.18
TMEM260-209ENST00000556079 TTC41PQ6P2S7 1318 aa7.66□□□□□ -1.18
TMEM260-209ENST00000556079 ALPK3Q96L96 1907 aa7.66□□□□□ -1.18
TMEM260-209ENST00000556079 TNPO2O14787 897 aaKnown RBP7.65□□□□□ -1.18
TMEM260-209ENST00000556079 GLRX3O76003 335 aaKnown RBP7.65□□□□□ -1.18
TMEM260-209ENST00000556079 GNRH1P01148 92 aa7.65□□□□□ -1.18
TMEM260-209ENST00000556079 APPP05067 770 aa7.65□□□□□ -1.18
TMEM260-209ENST00000556079 HOXB1P14653 301 aaPredicted RBP7.65□□□□□ -1.18
TMEM260-209ENST00000556079 TAL1P17542 331 aaPredicted RBP7.65□□□□□ -1.18
TMEM260-209ENST00000556079 RASA1P20936 1047 aa7.65□□□□□ -1.18
TMEM260-209ENST00000556079 GJA8P48165 433 aa7.65□□□□□ -1.18
TMEM260-209ENST00000556079 FLT3LGP49771 235 aa7.65□□□□□ -1.18
TMEM260-209ENST00000556079 PRMT2P55345 433 aa7.65□□□□□ -1.18
TMEM260-209ENST00000556079 FCGRTP55899 365 aa7.65□□□□□ -1.18
TMEM260-209ENST00000556079 IRX3P78415 501 aaPredicted RBP7.65□□□□□ -1.18
TMEM260-209ENST00000556079 CCL14Q16627 93 aa7.65□□□□□ -1.18
TMEM260-209ENST00000556079 FAM47AQ5JRC9 791 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms