RNA–Protein interactions for RNA: ENST00000555778.1

SDR39U1-214, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 608 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-214ENST00000555778 RNF113AO15541 343 aaKnown RBP16.5■□□□□ 0.23
SDR39U1-214ENST00000555778 TFRCP02786 760 aaKnown RBP16.5■□□□□ 0.23
SDR39U1-214ENST00000555778 PRKAR2AP13861 404 aaKnown RBP16.5■□□□□ 0.23
SDR39U1-214ENST00000555778 ZKSCAN1P17029 563 aaPredicted RBP16.5■□□□□ 0.23
SDR39U1-214ENST00000555778 MX1P20591 662 aa16.5■□□□□ 0.23
SDR39U1-214ENST00000555778 MAPK4P31152 587 aa16.5■□□□□ 0.23
SDR39U1-214ENST00000555778 PLEKHH3Q7Z736 793 aa16.5■□□□□ 0.23
SDR39U1-214ENST00000555778 UBE2Q1Q7Z7E8 422 aa16.5■□□□□ 0.23
SDR39U1-214ENST00000555778 GTF3C2Q8WUA4 911 aaPredicted RBP16.5■□□□□ 0.23
SDR39U1-214ENST00000555778 NUDT12Q9BQG2 462 aa16.5■□□□□ 0.23
SDR39U1-214ENST00000555778 FSD1Q9BTV5 496 aa16.5■□□□□ 0.23
SDR39U1-214ENST00000555778 ARPP21Q9UBL0 812 aaPredicted RBP16.5■□□□□ 0.23
SDR39U1-214ENST00000555778 RABGAP1Q9Y3P9 1069 aa16.5■□□□□ 0.23
SDR39U1-214ENST00000555778 ZNF236Q9UL36 1845 aa16.49■□□□□ 0.23
SDR39U1-214ENST00000555778 GSG1L2A8MUP6 293 aa16.49■□□□□ 0.23
SDR39U1-214ENST00000555778 MINDY4BA8MYZ0 360 aa16.49■□□□□ 0.23
SDR39U1-214ENST00000555778 SGPL1O95470 568 aa16.49■□□□□ 0.23
SDR39U1-214ENST00000555778 TDO2P48775 406 aa16.49■□□□□ 0.23
SDR39U1-214ENST00000555778 SIAH1Q8IUQ4 282 aa16.49■□□□□ 0.23
SDR39U1-214ENST00000555778 DPF3Q92784 378 aa16.49■□□□□ 0.23
SDR39U1-214ENST00000555778 APBA2Q99767 749 aa16.49■□□□□ 0.23
SDR39U1-214ENST00000555778 ARHGEF10LQ9HCE6 1279 aa16.49■□□□□ 0.23
SDR39U1-214ENST00000555778 PCDH10Q9P2E7 1040 aa16.49■□□□□ 0.23
SDR39U1-214ENST00000555778 ROBO3Q96MS0 1386 aa16.49■□□□□ 0.23
SDR39U1-214ENST00000555778 TTC41PQ6P2S7 1318 aa16.48■□□□□ 0.23
SDR39U1-214ENST00000555778 PRDM1O75626 825 aa16.48■□□□□ 0.23
SDR39U1-214ENST00000555778 FLOT1O75955 427 aa16.48■□□□□ 0.23
SDR39U1-214ENST00000555778 APPP05067 770 aa16.48■□□□□ 0.23
SDR39U1-214ENST00000555778 ANKRD45Q5TZF3 282 aa16.48■□□□□ 0.23
SDR39U1-214ENST00000555778 CCDC129Q6ZRS4 1044 aa16.48■□□□□ 0.23
SDR39U1-214ENST00000555778 ATG4CQ96DT6 458 aa16.48■□□□□ 0.23
SDR39U1-214ENST00000555778 SALL3Q9BXA9 1300 aa16.47■□□□□ 0.23
SDR39U1-214ENST00000555778 ERC2O15083 957 aa16.47■□□□□ 0.23
SDR39U1-214ENST00000555778 EEF2P13639 858 aaKnown RBP16.47■□□□□ 0.23
SDR39U1-214ENST00000555778 RGS2P41220 211 aa16.47■□□□□ 0.23
SDR39U1-214ENST00000555778 PLS1Q14651 629 aa16.47■□□□□ 0.23
SDR39U1-214ENST00000555778 MORN1Q5T089 497 aa16.47■□□□□ 0.23
SDR39U1-214ENST00000555778 NUP88Q99567 741 aaPredicted RBP16.47■□□□□ 0.23
SDR39U1-214ENST00000555778 VCPKMTQ9H867 229 aa16.47■□□□□ 0.23
SDR39U1-214ENST00000555778 FBXO28Q9NVF7 368 aa16.47■□□□□ 0.23
SDR39U1-214ENST00000555778 TRIOBPQ9H2D6 2365 aa16.46■□□□□ 0.23
SDR39U1-214ENST00000555778 GLRX3O76003 335 aaKnown RBP16.46■□□□□ 0.23
SDR39U1-214ENST00000555778 RASA1P20936 1047 aa16.46■□□□□ 0.23
SDR39U1-214ENST00000555778 CCND3P30281 292 aaPredicted RBP16.46■□□□□ 0.23
SDR39U1-214ENST00000555778 CCNA1P78396 465 aa16.46■□□□□ 0.23
SDR39U1-214ENST00000555778 CACNB2Q08289 660 aaPredicted RBP16.46■□□□□ 0.23
SDR39U1-214ENST00000555778 USP6NLQ92738 828 aa16.46■□□□□ 0.23
SDR39U1-214ENST00000555778 PAWRQ96IZ0 340 aaKnown RBP16.46■□□□□ 0.23
SDR39U1-214ENST00000555778 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.46■□□□□ 0.23
SDR39U1-214ENST00000555778 MOV10L1Q9BXT6 1211 aaKnown RBP16.46■□□□□ 0.23
SDR39U1-214ENST00000555778 CRISPLD2Q9H0B8 497 aa16.46■□□□□ 0.23
SDR39U1-214ENST00000555778 SH2D4AQ9H788 454 aa16.46■□□□□ 0.23
SDR39U1-214ENST00000555778 HMX1Q9NP08 348 aaPredicted RBP16.46■□□□□ 0.23
SDR39U1-214ENST00000555778 FLRT1Q9NZU1 646 aa16.46■□□□□ 0.23
SDR39U1-214ENST00000555778 TMX2Q9Y320 296 aa16.46■□□□□ 0.23
SDR39U1-214ENST00000555778 RPTORQ8N122 1335 aa16.45■□□□□ 0.22
SDR39U1-214ENST00000555778 ZFYP08048 801 aaPredicted RBP16.45■□□□□ 0.22
SDR39U1-214ENST00000555778 MAP2K5Q13163 448 aa16.45■□□□□ 0.22
SDR39U1-214ENST00000555778 HABP4Q5JVS0 413 aaKnown RBP16.45■□□□□ 0.22
SDR39U1-214ENST00000555778 FAM83BQ5T0W9 1011 aa16.45■□□□□ 0.22
SDR39U1-214ENST00000555778 MAP3K21Q5TCX8 1036 aa16.45■□□□□ 0.22
SDR39U1-214ENST00000555778 CHRDL2Q6WN34 429 aa16.45■□□□□ 0.22
SDR39U1-214ENST00000555778 LBX2Q6XYB7 198 aa16.45■□□□□ 0.22
SDR39U1-214ENST00000555778 CCDC17Q96LX7 622 aa16.45■□□□□ 0.22
SDR39U1-214ENST00000555778 ZBTB47Q9UFB7 747 aaPredicted RBP16.45■□□□□ 0.22
SDR39U1-214ENST00000555778 COLQQ9Y215 455 aaPredicted RBP16.45■□□□□ 0.22
SDR39U1-214ENST00000555778 IVNS1ABPQ9Y6Y0 642 aa16.45■□□□□ 0.22
SDR39U1-214ENST00000555778 GRB14Q14449 540 aa16.44■□□□□ 0.22
SDR39U1-214ENST00000555778 COG2Q14746 738 aa16.44■□□□□ 0.22
SDR39U1-214ENST00000555778 NPLOC4Q8TAT6 608 aa16.44■□□□□ 0.22
SDR39U1-214ENST00000555778 LPAR1Q92633 364 aa16.44■□□□□ 0.22
SDR39U1-214ENST00000555778 CHMP4CQ96CF2 233 aa16.44■□□□□ 0.22
SDR39U1-214ENST00000555778 HTATIP2Q9BUP3 242 aa16.44■□□□□ 0.22
SDR39U1-214ENST00000555778 LNPKQ9C0E8 428 aa16.44■□□□□ 0.22
SDR39U1-214ENST00000555778 SPATC1LQ9H0A9 340 aa16.44■□□□□ 0.22
SDR39U1-214ENST00000555778 MKNK2Q9HBH9 465 aa16.44■□□□□ 0.22
SDR39U1-214ENST00000555778 PLXNA1Q9UIW2 1896 aa16.44■□□□□ 0.22
SDR39U1-214ENST00000555778 WDR46O15213 610 aaKnown RBP16.43■□□□□ 0.22
SDR39U1-214ENST00000555778 XRCC5P13010 732 aaKnown RBP16.43■□□□□ 0.22
SDR39U1-214ENST00000555778 ERCC3P19447 782 aa16.43■□□□□ 0.22
SDR39U1-214ENST00000555778 PTPREP23469 700 aa16.43■□□□□ 0.22
SDR39U1-214ENST00000555778 SBK1Q52WX2 424 aa16.43■□□□□ 0.22
SDR39U1-214ENST00000555778 ZMYM1Q5SVZ6 1142 aa16.43■□□□□ 0.22
SDR39U1-214ENST00000555778 NCAPG2Q86XI2 1143 aa16.43■□□□□ 0.22
SDR39U1-214ENST00000555778 LRRC47Q8N1G4 583 aaKnown RBP16.43■□□□□ 0.22
SDR39U1-214ENST00000555778 GCC1Q96CN9 775 aa16.43■□□□□ 0.22
SDR39U1-214ENST00000555778 KANSL2Q9H9L4 492 aa16.43■□□□□ 0.22
SDR39U1-214ENST00000555778 SLC15A5A6NIM6 579 aa16.42■□□□□ 0.22
SDR39U1-214ENST00000555778 FOXP2O15409 715 aa16.42■□□□□ 0.22
SDR39U1-214ENST00000555778 ADORA2AP29274 412 aa16.42■□□□□ 0.22
SDR39U1-214ENST00000555778 DSG3P32926 999 aa16.42■□□□□ 0.22
SDR39U1-214ENST00000555778 CYP2C19P33261 490 aa16.42■□□□□ 0.22
SDR39U1-214ENST00000555778 HDAC1Q13547 482 aaPredicted RBP16.42■□□□□ 0.22
SDR39U1-214ENST00000555778 B4GALNT3Q6L9W6 998 aa16.42■□□□□ 0.22
SDR39U1-214ENST00000555778 C7orf61Q8IZ16 206 aa16.42■□□□□ 0.22
SDR39U1-214ENST00000555778 IFNL3Q8IZI9 196 aa16.42■□□□□ 0.22
SDR39U1-214ENST00000555778 GOPCQ9HD26 462 aa16.42■□□□□ 0.22
SDR39U1-214ENST00000555778 LAMA3Q16787 3333 aa16.41■□□□□ 0.22
SDR39U1-214ENST00000555778 DNAH12Q6ZR08 3092 aa16.41■□□□□ 0.22
SDR39U1-214ENST00000555778 GNAT2P19087 354 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms