RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 APBA2Q99767 749 aa11.33□□□□□ -0.6
PRKCH-218ENST00000555628 NUDT12Q9BQG2 462 aa11.33□□□□□ -0.6
PRKCH-218ENST00000555628 SEMA6BQ9H3T3 888 aa11.33□□□□□ -0.6
PRKCH-218ENST00000555628 PLA2G2EQ9NZK7 142 aa11.33□□□□□ -0.6
PRKCH-218ENST00000555628 FLRT1Q9NZU1 646 aa11.33□□□□□ -0.6
PRKCH-218ENST00000555628 TSR3Q9UJK0 312 aaKnown RBP11.33□□□□□ -0.6
PRKCH-218ENST00000555628 USP17L5A8MUK1 530 aa11.32□□□□□ -0.6
PRKCH-218ENST00000555628 MAPK4P31152 587 aa11.32□□□□□ -0.6
PRKCH-218ENST00000555628 ZEB1P37275 1124 aaPredicted RBP11.32□□□□□ -0.6
PRKCH-218ENST00000555628 BACE1P56817 501 aa11.32□□□□□ -0.6
PRKCH-218ENST00000555628 MECOMQ03112 1051 aa11.32□□□□□ -0.6
PRKCH-218ENST00000555628 MTMR2Q13614 643 aa11.32□□□□□ -0.6
PRKCH-218ENST00000555628 SHROOM1Q2M3G4 852 aaPredicted RBP11.32□□□□□ -0.6
PRKCH-218ENST00000555628 Q3C1V9 767 aa11.32□□□□□ -0.6
PRKCH-218ENST00000555628 GPR142Q7Z601 462 aa11.32□□□□□ -0.6
PRKCH-218ENST00000555628 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.32□□□□□ -0.6
PRKCH-218ENST00000555628 PTPRCP08575 1304 aa11.32□□□□□ -0.6
PRKCH-218ENST00000555628 ZNF521Q96K83 1311 aa11.32□□□□□ -0.6
PRKCH-218ENST00000555628 CNMDO75829 334 aa11.31□□□□□ -0.6
PRKCH-218ENST00000555628 ERVK-9P63128 1117 aa11.31□□□□□ -0.6
PRKCH-218ENST00000555628 ERVK-24P63145 666 aa11.31□□□□□ -0.6
PRKCH-218ENST00000555628 SMAD3P84022 425 aaKnown RBP11.31□□□□□ -0.6
PRKCH-218ENST00000555628 SNX17Q15036 470 aa11.31□□□□□ -0.6
PRKCH-218ENST00000555628 SHHQ15465 462 aa11.31□□□□□ -0.6
PRKCH-218ENST00000555628 ZGPATQ8N5A5 531 aaKnown RBP11.31□□□□□ -0.6
PRKCH-218ENST00000555628 USP38Q8NB14 1042 aa11.31□□□□□ -0.6
PRKCH-218ENST00000555628 GPRC5AQ8NFJ5 357 aa11.31□□□□□ -0.6
PRKCH-218ENST00000555628 MYLIPQ8WY64 445 aa11.31□□□□□ -0.6
PRKCH-218ENST00000555628 GNL3LQ9NVN8 582 aaKnown RBP11.31□□□□□ -0.6
PRKCH-218ENST00000555628 A0A0G2JMZ2 1700 aa11.3□□□□□ -0.6
PRKCH-218ENST00000555628 RCCD1A6NED2 376 aa11.3□□□□□ -0.6
PRKCH-218ENST00000555628 DNM1LO00429 736 aa11.3□□□□□ -0.6
PRKCH-218ENST00000555628 MAP4K4O95819 1239 aaPredicted RBP11.3□□□□□ -0.6
PRKCH-218ENST00000555628 HOXC6P09630 235 aa11.3□□□□□ -0.6
PRKCH-218ENST00000555628 RGS2P41220 211 aa11.3□□□□□ -0.6
PRKCH-218ENST00000555628 RTP1P59025 263 aa11.3□□□□□ -0.6
PRKCH-218ENST00000555628 DZIP1Q86YF9 867 aaKnown RBP11.3□□□□□ -0.6
PRKCH-218ENST00000555628 TRPV1Q8NER1 839 aa11.3□□□□□ -0.6
PRKCH-218ENST00000555628 NSUN4Q96CB9 384 aaKnown RBP11.3□□□□□ -0.6
PRKCH-218ENST00000555628 HERC5Q9UII4 1024 aaKnown RBP11.3□□□□□ -0.6
PRKCH-218ENST00000555628 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.3□□□□□ -0.6
PRKCH-218ENST00000555628 PPP4CP60510 307 aa11.29□□□□□ -0.6
PRKCH-218ENST00000555628 IRX3P78415 501 aaPredicted RBP11.29□□□□□ -0.6
PRKCH-218ENST00000555628 MAP2K5Q13163 448 aa11.29□□□□□ -0.6
PRKCH-218ENST00000555628 LPAR1Q92633 364 aa11.29□□□□□ -0.6
PRKCH-218ENST00000555628 LBHD1Q9BQE6 289 aaPredicted RBP11.29□□□□□ -0.6
PRKCH-218ENST00000555628 SENP6Q9GZR1 1112 aaPredicted RBP11.29□□□□□ -0.6
PRKCH-218ENST00000555628 SIL1Q9H173 461 aa11.29□□□□□ -0.6
PRKCH-218ENST00000555628 CEP126Q9P2H0 1117 aa11.29□□□□□ -0.6
PRKCH-218ENST00000555628 DDX20Q9UHI6 824 aaKnown RBP11.29□□□□□ -0.6
PRKCH-218ENST00000555628 TRANK1O15050 2925 aa11.29□□□□□ -0.6
PRKCH-218ENST00000555628 TMEM265A0A087WTH1 108 aa11.28□□□□□ -0.6
PRKCH-218ENST00000555628 CYBAP13498 195 aa11.28□□□□□ -0.6
PRKCH-218ENST00000555628 IL15P40933 162 aaPredicted RBP11.28□□□□□ -0.6
PRKCH-218ENST00000555628 PI16Q6UXB8 463 aa11.28□□□□□ -0.6
PRKCH-218ENST00000555628 PLEKHH3Q7Z736 793 aa11.28□□□□□ -0.6
PRKCH-218ENST00000555628 SLF2Q8IX21 1173 aa11.28□□□□□ -0.6
PRKCH-218ENST00000555628 AS3MTQ9HBK9 375 aa11.28□□□□□ -0.6
PRKCH-218ENST00000555628 COPRSQ9NQ92 184 aa11.28□□□□□ -0.6
PRKCH-218ENST00000555628 PDLIM7Q9NR12 457 aa11.28□□□□□ -0.6
PRKCH-218ENST00000555628 ABCF2Q9UG63 623 aa11.28□□□□□ -0.6
PRKCH-218ENST00000555628 RAPGEFL1Q9UHV5 662 aa11.28□□□□□ -0.6
PRKCH-218ENST00000555628 PA2G4Q9UQ80 394 aaKnown RBP11.28□□□□□ -0.6
PRKCH-218ENST00000555628 SALL2Q9Y467 1007 aaPredicted RBP11.28□□□□□ -0.6
PRKCH-218ENST00000555628 C19orf81C9J6K1 198 aa11.27□□□□□ -0.61
PRKCH-218ENST00000555628 RNF40O75150 1001 aa11.27□□□□□ -0.61
PRKCH-218ENST00000555628 ASNSP08243 561 aa11.27□□□□□ -0.61
PRKCH-218ENST00000555628 ITGB8P26012 769 aa11.27□□□□□ -0.61
PRKCH-218ENST00000555628 PDE3AQ14432 1141 aa11.27□□□□□ -0.61
PRKCH-218ENST00000555628 GRB14Q14449 540 aa11.27□□□□□ -0.61
PRKCH-218ENST00000555628 SPTY2D1Q68D10 685 aaPredicted RBP11.27□□□□□ -0.61
PRKCH-218ENST00000555628 LBX2Q6XYB7 198 aa11.27□□□□□ -0.61
PRKCH-218ENST00000555628 GTF3C2Q8WUA4 911 aaPredicted RBP11.27□□□□□ -0.61
PRKCH-218ENST00000555628 SSH1Q8WYL5 1049 aa11.27□□□□□ -0.61
PRKCH-218ENST00000555628 C12orf42Q96LP6 360 aa11.27□□□□□ -0.61
PRKCH-218ENST00000555628 HMG20BQ9P0W2 317 aa11.27□□□□□ -0.61
PRKCH-218ENST00000555628 ZBTB21Q9ULJ3 1066 aa11.27□□□□□ -0.61
PRKCH-218ENST00000555628 MYO5AQ9Y4I1 1855 aaKnown RBP11.26□□□□□ -0.61
PRKCH-218ENST00000555628 TRIM43BA6NCK2 446 aa11.26□□□□□ -0.61
PRKCH-218ENST00000555628 TULP1O00294 542 aaPredicted RBP11.26□□□□□ -0.61
PRKCH-218ENST00000555628 MSCO60682 206 aa11.26□□□□□ -0.61
PRKCH-218ENST00000555628 FOSL2P15408 326 aa11.26□□□□□ -0.61
PRKCH-218ENST00000555628 DNAJB2P25686 324 aa11.26□□□□□ -0.61
PRKCH-218ENST00000555628 EPHB4P54760 987 aa11.26□□□□□ -0.61
PRKCH-218ENST00000555628 TIMM10P62072 90 aa11.26□□□□□ -0.61
PRKCH-218ENST00000555628 TJAP1Q5JTD0 557 aa11.26□□□□□ -0.61
PRKCH-218ENST00000555628 C1orf53Q5VUE5 145 aa11.26□□□□□ -0.61
PRKCH-218ENST00000555628 SH3RF1Q7Z6J0 888 aa11.26□□□□□ -0.61
PRKCH-218ENST00000555628 METTL3Q86U44 580 aaKnown RBP11.26□□□□□ -0.61
PRKCH-218ENST00000555628 NPLOC4Q8TAT6 608 aa11.26□□□□□ -0.61
PRKCH-218ENST00000555628 SH3RF3Q8TEJ3 882 aaPredicted RBP11.26□□□□□ -0.61
PRKCH-218ENST00000555628 NLRP7Q8WX94 980 aa11.26□□□□□ -0.61
PRKCH-218ENST00000555628 SYMPKQ92797 1274 aaKnown RBP11.26□□□□□ -0.61
PRKCH-218ENST00000555628 BADQ92934 168 aa11.26□□□□□ -0.61
PRKCH-218ENST00000555628 TRIM43Q96BQ3 446 aaPredicted RBP11.26□□□□□ -0.61
PRKCH-218ENST00000555628 PHOX2BQ99453 314 aa11.26□□□□□ -0.61
PRKCH-218ENST00000555628 GINM1Q9NU53 330 aa11.26□□□□□ -0.61
PRKCH-218ENST00000555628 PI4KBQ9UBF8 816 aa11.26□□□□□ -0.61
PRKCH-218ENST00000555628 PIEZO1Q92508 2521 aa11.25□□□□□ -0.61
PRKCH-218ENST00000555628 A0A1B0GUL7 405 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms