RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 ANKRD45Q5TZF3 282 aa16.55■□□□□ 0.24
PCNX4-209ENST00000555569 UBE2Q1Q7Z7E8 422 aa16.55■□□□□ 0.24
PCNX4-209ENST00000555569 SIAH1Q8IUQ4 282 aa16.55■□□□□ 0.24
PCNX4-209ENST00000555569 TRIB2Q92519 343 aa16.55■□□□□ 0.24
PCNX4-209ENST00000555569 DEFB118Q96PH6 123 aa16.55■□□□□ 0.24
PCNX4-209ENST00000555569 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.55■□□□□ 0.24
PCNX4-209ENST00000555569 TMX2Q9Y320 296 aa16.55■□□□□ 0.24
PCNX4-209ENST00000555569 M0R2C6 588 aa16.54■□□□□ 0.24
PCNX4-209ENST00000555569 FARP2O94887 1054 aaPredicted RBP16.54■□□□□ 0.24
PCNX4-209ENST00000555569 TFRCP02786 760 aaKnown RBP16.54■□□□□ 0.24
PCNX4-209ENST00000555569 GNAT2P19087 354 aa16.54■□□□□ 0.24
PCNX4-209ENST00000555569 TRIM32Q13049 653 aa16.54■□□□□ 0.24
PCNX4-209ENST00000555569 HDAC1Q13547 482 aaPredicted RBP16.54■□□□□ 0.24
PCNX4-209ENST00000555569 COG2Q14746 738 aa16.54■□□□□ 0.24
PCNX4-209ENST00000555569 KIAA1755Q5JYT7 1200 aa16.54■□□□□ 0.24
PCNX4-209ENST00000555569 MORN1Q5T089 497 aa16.54■□□□□ 0.24
PCNX4-209ENST00000555569 LPAR1Q92633 364 aa16.54■□□□□ 0.24
PCNX4-209ENST00000555569 USP6NLQ92738 828 aa16.54■□□□□ 0.24
PCNX4-209ENST00000555569 GCC1Q96CN9 775 aa16.54■□□□□ 0.24
PCNX4-209ENST00000555569 FSD1Q9BTV5 496 aa16.54■□□□□ 0.24
PCNX4-209ENST00000555569 TANGO6Q9C0B7 1094 aa16.54■□□□□ 0.24
PCNX4-209ENST00000555569 VCPKMTQ9H867 229 aa16.54■□□□□ 0.24
PCNX4-209ENST00000555569 HOXC10Q9NYD6 342 aa16.54■□□□□ 0.24
PCNX4-209ENST00000555569 BTBD7Q9P203 1132 aa16.54■□□□□ 0.24
PCNX4-209ENST00000555569 GREB1LQ9C091 1923 aaPredicted RBP16.54■□□□□ 0.24
PCNX4-209ENST00000555569 PARP14Q460N5 1801 aa16.54■□□□□ 0.24
PCNX4-209ENST00000555569 RPTORQ8N122 1335 aa16.53■□□□□ 0.24
PCNX4-209ENST00000555569 SALL3Q9BXA9 1300 aa16.53■□□□□ 0.24
PCNX4-209ENST00000555569 MINDY4BA8MYZ0 360 aa16.53■□□□□ 0.24
PCNX4-209ENST00000555569 RGS2P41220 211 aa16.53■□□□□ 0.24
PCNX4-209ENST00000555569 WDR78Q5VTH9 848 aa16.53■□□□□ 0.24
PCNX4-209ENST00000555569 TRMT44Q8IYL2 757 aaKnown RBP16.53■□□□□ 0.24
PCNX4-209ENST00000555569 KANSL2Q9H9L4 492 aa16.53■□□□□ 0.24
PCNX4-209ENST00000555569 EPB41L4AQ9HCS5 686 aaPredicted RBP16.53■□□□□ 0.24
PCNX4-209ENST00000555569 HMX1Q9NP08 348 aaPredicted RBP16.53■□□□□ 0.24
PCNX4-209ENST00000555569 A0A0G2JMZ2 1700 aa16.53■□□□□ 0.24
PCNX4-209ENST00000555569 ROBO3Q96MS0 1386 aa16.52■□□□□ 0.24
PCNX4-209ENST00000555569 APPP05067 770 aa16.52■□□□□ 0.24
PCNX4-209ENST00000555569 EEF2P13639 858 aaKnown RBP16.52■□□□□ 0.24
PCNX4-209ENST00000555569 ZKSCAN1P17029 563 aaPredicted RBP16.52■□□□□ 0.24
PCNX4-209ENST00000555569 TDO2P48775 406 aa16.52■□□□□ 0.24
PCNX4-209ENST00000555569 ATP2B2Q01814 1243 aa16.52■□□□□ 0.24
PCNX4-209ENST00000555569 MAP2K5Q13163 448 aa16.52■□□□□ 0.24
PCNX4-209ENST00000555569 AAMPQ13685 434 aa16.52■□□□□ 0.24
PCNX4-209ENST00000555569 SPICE1Q8N0Z3 855 aa16.52■□□□□ 0.24
PCNX4-209ENST00000555569 STK11IPQ8N1F8 1099 aa16.52■□□□□ 0.24
PCNX4-209ENST00000555569 APBA2Q99767 749 aa16.52■□□□□ 0.24
PCNX4-209ENST00000555569 CRISPLD2Q9H0B8 497 aa16.52■□□□□ 0.24
PCNX4-209ENST00000555569 MKNK2Q9HBH9 465 aa16.52■□□□□ 0.24
PCNX4-209ENST00000555569 SLC15A5A6NIM6 579 aa16.51■□□□□ 0.23
PCNX4-209ENST00000555569 PATL2C9JE40 543 aaKnown RBP16.51■□□□□ 0.23
PCNX4-209ENST00000555569 WDR46O15213 610 aaKnown RBP16.51■□□□□ 0.23
PCNX4-209ENST00000555569 SLC34A2O95436 690 aa16.51■□□□□ 0.23
PCNX4-209ENST00000555569 RASA1P20936 1047 aa16.51■□□□□ 0.23
PCNX4-209ENST00000555569 PTPREP23469 700 aa16.51■□□□□ 0.23
PCNX4-209ENST00000555569 DSG3P32926 999 aa16.51■□□□□ 0.23
PCNX4-209ENST00000555569 ZMYM1Q5SVZ6 1142 aa16.51■□□□□ 0.23
PCNX4-209ENST00000555569 DPF3Q92784 378 aa16.51■□□□□ 0.23
PCNX4-209ENST00000555569 SEC62Q99442 399 aaKnown RBP16.51■□□□□ 0.23
PCNX4-209ENST00000555569 HTATIP2Q9BUP3 242 aa16.51■□□□□ 0.23
PCNX4-209ENST00000555569 IVNS1ABPQ9Y6Y0 642 aa16.51■□□□□ 0.23
PCNX4-209ENST00000555569 MYH4Q9Y623 1939 aa16.51■□□□□ 0.23
PCNX4-209ENST00000555569 COL11A1P12107 1806 aaPredicted RBP16.5■□□□□ 0.23
PCNX4-209ENST00000555569 FLOT1O75955 427 aa16.5■□□□□ 0.23
PCNX4-209ENST00000555569 PRKAR2AP13861 404 aaKnown RBP16.5■□□□□ 0.23
PCNX4-209ENST00000555569 CCL14Q16627 93 aa16.5■□□□□ 0.23
PCNX4-209ENST00000555569 MAP3K21Q5TCX8 1036 aa16.5■□□□□ 0.23
PCNX4-209ENST00000555569 IFNL3Q8IZI9 196 aa16.5■□□□□ 0.23
PCNX4-209ENST00000555569 MB21D1Q8N884 522 aa16.5■□□□□ 0.23
PCNX4-209ENST00000555569 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.5■□□□□ 0.23
PCNX4-209ENST00000555569 NACAP1Q9BZK3 213 aa16.5■□□□□ 0.23
PCNX4-209ENST00000555569 SPATC1LQ9H0A9 340 aa16.5■□□□□ 0.23
PCNX4-209ENST00000555569 GOPCQ9HD26 462 aa16.5■□□□□ 0.23
PCNX4-209ENST00000555569 STAP2Q9UGK3 403 aa16.5■□□□□ 0.23
PCNX4-209ENST00000555569 PDE1AP54750 535 aa16.49■□□□□ 0.23
PCNX4-209ENST00000555569 CACNB2Q08289 660 aaPredicted RBP16.49■□□□□ 0.23
PCNX4-209ENST00000555569 ATG4CQ96DT6 458 aa16.49■□□□□ 0.23
PCNX4-209ENST00000555569 MOV10L1Q9BXT6 1211 aaKnown RBP16.49■□□□□ 0.23
PCNX4-209ENST00000555569 ZNF287Q9HBT7 754 aa16.49■□□□□ 0.23
PCNX4-209ENST00000555569 ZNF236Q9UL36 1845 aa16.48■□□□□ 0.23
PCNX4-209ENST00000555569 H0YGN5 161 aa16.48■□□□□ 0.23
PCNX4-209ENST00000555569 GRB14Q14449 540 aa16.48■□□□□ 0.23
PCNX4-209ENST00000555569 SAMD1Q6SPF0 538 aaPredicted RBP16.48■□□□□ 0.23
PCNX4-209ENST00000555569 ANKLE1Q8NAG6 615 aa16.48■□□□□ 0.23
PCNX4-209ENST00000555569 SHCBP1Q8NEM2 672 aa16.48■□□□□ 0.23
PCNX4-209ENST00000555569 EVI5LQ96CN4 794 aa16.48■□□□□ 0.23
PCNX4-209ENST00000555569 NYAP2Q9P242 653 aa16.48■□□□□ 0.23
PCNX4-209ENST00000555569 ZNFX1Q9P2E3 1918 aaKnown RBP16.48■□□□□ 0.23
PCNX4-209ENST00000555569 ALPK3Q96L96 1907 aa16.47■□□□□ 0.23
PCNX4-209ENST00000555569 RAD21O60216 631 aa16.47■□□□□ 0.23
PCNX4-209ENST00000555569 HOXC6P09630 235 aa16.47■□□□□ 0.23
PCNX4-209ENST00000555569 PLS1Q14651 629 aa16.47■□□□□ 0.23
PCNX4-209ENST00000555569 ZNF444Q8N0Y2 327 aaPredicted RBP16.47■□□□□ 0.23
PCNX4-209ENST00000555569 PAWRQ96IZ0 340 aaKnown RBP16.47■□□□□ 0.23
PCNX4-209ENST00000555569 NAPBQ9H115 298 aa16.47■□□□□ 0.23
PCNX4-209ENST00000555569 RWDD1Q9H446 243 aaPredicted RBP16.47■□□□□ 0.23
PCNX4-209ENST00000555569 STRNO43815 780 aa16.46■□□□□ 0.23
PCNX4-209ENST00000555569 PRDM1O75626 825 aa16.46■□□□□ 0.23
PCNX4-209ENST00000555569 ERCC3P19447 782 aa16.46■□□□□ 0.23
PCNX4-209ENST00000555569 HABP4Q5JVS0 413 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms