RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 CATSPERGQ6ZRH7 1159 aa13.15□□□□□ -0.3
TDP1-212ENST00000555565 MAGEB6Q8N7X4 407 aa13.15□□□□□ -0.3
TDP1-212ENST00000555565 MIGA1Q8NAN2 632 aa13.15□□□□□ -0.3
TDP1-212ENST00000555565 SAP30BPQ9UHR5 308 aaKnown RBP13.15□□□□□ -0.3
TDP1-212ENST00000555565 RCAN3Q9UKA8 241 aa13.15□□□□□ -0.3
TDP1-212ENST00000555565 MYH1P12882 1939 aa13.15□□□□□ -0.3
TDP1-212ENST00000555565 APBB1O00213 710 aa13.14□□□□□ -0.31
TDP1-212ENST00000555565 MAP3K12Q12852 859 aa13.14□□□□□ -0.31
TDP1-212ENST00000555565 ARRDC4Q8NCT1 418 aa13.14□□□□□ -0.31
TDP1-212ENST00000555565 KIF1BPQ96EK5 621 aa13.14□□□□□ -0.31
TDP1-212ENST00000555565 PRDM5Q9NQX1 630 aaPredicted RBP13.14□□□□□ -0.31
TDP1-212ENST00000555565 USP17L15C9J2P7 530 aa13.13□□□□□ -0.31
TDP1-212ENST00000555565 USP17L13C9JLJ4 530 aa13.13□□□□□ -0.31
TDP1-212ENST00000555565 USP17L11C9JVI0 530 aa13.13□□□□□ -0.31
TDP1-212ENST00000555565 USP17L18D6R9N7 530 aa13.13□□□□□ -0.31
TDP1-212ENST00000555565 USP17L22D6RA61 530 aa13.13□□□□□ -0.31
TDP1-212ENST00000555565 USP17L17D6RBQ6 530 aa13.13□□□□□ -0.31
TDP1-212ENST00000555565 USP17L19D6RCP7 530 aa13.13□□□□□ -0.31
TDP1-212ENST00000555565 USP17L20D6RJB6 530 aa13.13□□□□□ -0.31
TDP1-212ENST00000555565 HMMRO75330 724 aa13.13□□□□□ -0.31
TDP1-212ENST00000555565 GLRX3O76003 335 aaKnown RBP13.13□□□□□ -0.31
TDP1-212ENST00000555565 ADCYAP1R1P41586 468 aa13.13□□□□□ -0.31
TDP1-212ENST00000555565 CCNA1P78396 465 aa13.13□□□□□ -0.31
TDP1-212ENST00000555565 USP17L24Q0WX57 530 aa13.13□□□□□ -0.31
TDP1-212ENST00000555565 ANO1Q5XXA6 986 aa13.13□□□□□ -0.31
TDP1-212ENST00000555565 TMED8Q6PL24 325 aaPredicted RBP13.13□□□□□ -0.31
TDP1-212ENST00000555565 CERS3Q8IU89 383 aa13.13□□□□□ -0.31
TDP1-212ENST00000555565 CLASRPQ8N2M8 674 aaKnown RBP13.13□□□□□ -0.31
TDP1-212ENST00000555565 CRACR2BQ8N4Y2 399 aaPredicted RBP13.13□□□□□ -0.31
TDP1-212ENST00000555565 SEPT4O43236 478 aa13.12□□□□□ -0.31
TDP1-212ENST00000555565 GH2P01242 217 aa13.12□□□□□ -0.31
TDP1-212ENST00000555565 HLA-DOAP06340 250 aa13.12□□□□□ -0.31
TDP1-212ENST00000555565 USP5P45974 858 aa13.12□□□□□ -0.31
TDP1-212ENST00000555565 TLE2Q04725 743 aa13.12□□□□□ -0.31
TDP1-212ENST00000555565 LRRC41Q15345 812 aa13.12□□□□□ -0.31
TDP1-212ENST00000555565 OLFML2BQ68BL8 750 aa13.12□□□□□ -0.31
TDP1-212ENST00000555565 TATDN1Q6P1N9 297 aa13.12□□□□□ -0.31
TDP1-212ENST00000555565 RIOK1Q9BRS2 568 aaKnown RBP13.12□□□□□ -0.31
TDP1-212ENST00000555565 TRIM34Q9BYJ4 488 aa13.12□□□□□ -0.31
TDP1-212ENST00000555565 SPDYE16A6NNV3 312 aaPredicted RBP13.11□□□□□ -0.31
TDP1-212ENST00000555565 COBLO75128 1261 aa13.11□□□□□ -0.31
TDP1-212ENST00000555565 VCAM1P19320 739 aa13.11□□□□□ -0.31
TDP1-212ENST00000555565 PLA2G5P39877 138 aa13.11□□□□□ -0.31
TDP1-212ENST00000555565 TTF1Q15361 905 aaPredicted RBP13.11□□□□□ -0.31
TDP1-212ENST00000555565 PRAMEF19Q5SWL8 479 aa13.11□□□□□ -0.31
TDP1-212ENST00000555565 C20orf194Q5TEA3 1177 aa13.11□□□□□ -0.31
TDP1-212ENST00000555565 WDR78Q5VTH9 848 aa13.11□□□□□ -0.31
TDP1-212ENST00000555565 ACER1Q8TDN7 264 aa13.11□□□□□ -0.31
TDP1-212ENST00000555565 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.11□□□□□ -0.31
TDP1-212ENST00000555565 FERMT2Q96AC1 680 aa13.11□□□□□ -0.31
TDP1-212ENST00000555565 KIAA1683Q9H0B3 1180 aa13.11□□□□□ -0.31
TDP1-212ENST00000555565 TACC3Q9Y6A5 838 aa13.11□□□□□ -0.31
TDP1-212ENST00000555565 XIRP2A4UGR9 3374 aa13.1□□□□□ -0.31
TDP1-212ENST00000555565 KBTBD13C9JR72 458 aa13.1□□□□□ -0.31
TDP1-212ENST00000555565 GOLIM4O00461 696 aa13.1□□□□□ -0.31
TDP1-212ENST00000555565 KIAA0355O15063 1070 aa13.1□□□□□ -0.31
TDP1-212ENST00000555565 RAB11FIP3O75154 756 aa13.1□□□□□ -0.31
TDP1-212ENST00000555565 IFIT2P09913 472 aaKnown RBP13.1□□□□□ -0.31
TDP1-212ENST00000555565 PDE6AP16499 860 aa13.1□□□□□ -0.31
TDP1-212ENST00000555565 DNAJB2P25686 324 aa13.1□□□□□ -0.31
TDP1-212ENST00000555565 ZYXQ15942 572 aaKnown RBP13.1□□□□□ -0.31
TDP1-212ENST00000555565 SLC9C2Q5TAH2 1124 aa13.1□□□□□ -0.31
TDP1-212ENST00000555565 RNPC3Q96LT9 517 aaKnown RBP13.1□□□□□ -0.31
TDP1-212ENST00000555565 BCL11AQ9H165 835 aa13.1□□□□□ -0.31
TDP1-212ENST00000555565 EHD4Q9H223 541 aa13.1□□□□□ -0.31
TDP1-212ENST00000555565 CHMP4BQ9H444 224 aaKnown RBP13.1□□□□□ -0.31
TDP1-212ENST00000555565 ZNF576Q9H609 170 aa13.1□□□□□ -0.31
TDP1-212ENST00000555565 CWC22Q9HCG8 908 aaKnown RBP13.1□□□□□ -0.31
TDP1-212ENST00000555565 SERPINB13Q9UIV8 391 aa13.1□□□□□ -0.31
TDP1-212ENST00000555565 PHF24Q9UPV7 400 aa13.1□□□□□ -0.31
TDP1-212ENST00000555565 MAGEB6P1A0A0J9YX57 407 aa13.09□□□□□ -0.31
TDP1-212ENST00000555565 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.09□□□□□ -0.31
TDP1-212ENST00000555565 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.09□□□□□ -0.31
TDP1-212ENST00000555565 TCRBV5S4A2TA0A5A2 114 aa13.09□□□□□ -0.31
TDP1-212ENST00000555565 STRNO43815 780 aa13.09□□□□□ -0.31
TDP1-212ENST00000555565 ADORA2AP29274 412 aa13.09□□□□□ -0.31
TDP1-212ENST00000555565 GUCY1A2P33402 732 aa13.09□□□□□ -0.31
TDP1-212ENST00000555565 FAM47AQ5JRC9 791 aa13.09□□□□□ -0.31
TDP1-212ENST00000555565 DPP9Q86TI2 863 aa13.09□□□□□ -0.31
TDP1-212ENST00000555565 TTC6Q86TZ1 520 aa13.09□□□□□ -0.31
TDP1-212ENST00000555565 ATXN2LQ8WWM7 1075 aaKnown RBP13.09□□□□□ -0.31
TDP1-212ENST00000555565 ASB2Q96Q27 587 aa13.09□□□□□ -0.31
TDP1-212ENST00000555565 DNAJC2Q99543 621 aaKnown RBP13.09□□□□□ -0.31
TDP1-212ENST00000555565 MOV10L1Q9BXT6 1211 aaKnown RBP13.09□□□□□ -0.31
TDP1-212ENST00000555565 IVNS1ABPQ9Y6Y0 642 aa13.09□□□□□ -0.31
TDP1-212ENST00000555565 ZNF532Q9HCE3 1301 aa13.09□□□□□ -0.31
TDP1-212ENST00000555565 CLTBP09497 229 aa13.08□□□□□ -0.32
TDP1-212ENST00000555565 PLCD1P51178 756 aa13.08□□□□□ -0.32
TDP1-212ENST00000555565 USP14P54578 494 aa13.08□□□□□ -0.32
TDP1-212ENST00000555565 C16orf59Q7L2K0 433 aa13.08□□□□□ -0.32
TDP1-212ENST00000555565 CHD9Q3L8U1 2897 aa13.07□□□□□ -0.32
TDP1-212ENST00000555565 ZNF236Q9UL36 1845 aa13.07□□□□□ -0.32
TDP1-212ENST00000555565 ATP5JP18859 108 aa13.07□□□□□ -0.32
TDP1-212ENST00000555565 HOXD11P31277 338 aaPredicted RBP13.07□□□□□ -0.32
TDP1-212ENST00000555565 SHMT1P34896 483 aa13.07□□□□□ -0.32
TDP1-212ENST00000555565 EVX2Q03828 476 aa13.07□□□□□ -0.32
TDP1-212ENST00000555565 FAAP100Q0VG06 881 aa13.07□□□□□ -0.32
TDP1-212ENST00000555565 SHCBP1Q8NEM2 672 aa13.07□□□□□ -0.32
TDP1-212ENST00000555565 CRNKL1Q9BZJ0 848 aaKnown RBP13.07□□□□□ -0.32
TDP1-212ENST00000555565 BOLA2Q9H3K6 86 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms