RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 CNKSR3Q6P9H4 555 aa6.73□□□□□ -1.33
SRP54-207ENST00000555535 LINC01356Q8N9X3 169 aa6.73□□□□□ -1.33
SRP54-207ENST00000555535 BDH2Q9BUT1 245 aa6.73□□□□□ -1.33
SRP54-207ENST00000555535 CRTAC1Q9NQ79 661 aa6.73□□□□□ -1.33
SRP54-207ENST00000555535 CEP131Q9UPN4 1083 aa6.73□□□□□ -1.33
SRP54-207ENST00000555535 DTWD2Q8NBA8 298 aa6.72□□□□□ -1.33
SRP54-207ENST00000555535 NLRX1Q86UT6 975 aa6.71□□□□□ -1.34
SRP54-207ENST00000555535 DNAJB8Q8NHS0 232 aa6.71□□□□□ -1.34
SRP54-207ENST00000555535 LINC01599Q8WXQ3 324 aa6.71□□□□□ -1.34
SRP54-207ENST00000555535 ADAM7Q9H2U9 754 aa6.71□□□□□ -1.34
SRP54-207ENST00000555535 EPHB3P54753 998 aa6.7□□□□□ -1.34
SRP54-207ENST00000555535 PTPN11Q06124 597 aaPredicted RBP6.7□□□□□ -1.34
SRP54-207ENST00000555535 PDE4BQ07343 736 aa6.7□□□□□ -1.34
SRP54-207ENST00000555535 FBF1Q8TES7 1133 aa6.7□□□□□ -1.34
SRP54-207ENST00000555535 GAL3ST3Q96A11 431 aa6.7□□□□□ -1.34
SRP54-207ENST00000555535 CRELD1Q96HD1 420 aa6.7□□□□□ -1.34
SRP54-207ENST00000555535 TMEM87BQ96K49 555 aa6.7□□□□□ -1.34
SRP54-207ENST00000555535 CNTD2Q9H8S5 307 aa6.7□□□□□ -1.34
SRP54-207ENST00000555535 TJP2Q9UDY2 1190 aa6.7□□□□□ -1.34
SRP54-207ENST00000555535 FBXO24O75426 580 aa6.69□□□□□ -1.34
SRP54-207ENST00000555535 YBX1P67809 324 aaKnown RBP6.69□□□□□ -1.34
SRP54-207ENST00000555535 TEKQ02763 1124 aa6.69□□□□□ -1.34
SRP54-207ENST00000555535 ZNF827Q17R98 1081 aa6.69□□□□□ -1.34
SRP54-207ENST00000555535 ZFYVE27Q5T4F4 411 aa6.69□□□□□ -1.34
SRP54-207ENST00000555535 HHIPL2Q6UWX4 724 aa6.69□□□□□ -1.34
SRP54-207ENST00000555535 SYT8Q8NBV8 401 aa6.69□□□□□ -1.34
SRP54-207ENST00000555535 MZB1Q8WU39 189 aa6.69□□□□□ -1.34
SRP54-207ENST00000555535 EPB41L4AQ9HCS5 686 aaPredicted RBP6.69□□□□□ -1.34
SRP54-207ENST00000555535 PNMA6FA0A0J9YX94 578 aa6.68□□□□□ -1.34
SRP54-207ENST00000555535 K7ESM1 405 aa6.68□□□□□ -1.34
SRP54-207ENST00000555535 AKAP8O43823 692 aaKnown RBP6.68□□□□□ -1.34
SRP54-207ENST00000555535 PGRP06401 933 aa6.68□□□□□ -1.34
SRP54-207ENST00000555535 VIPR1P32241 457 aa6.68□□□□□ -1.34
SRP54-207ENST00000555535 CAP1Q01518 475 aa6.68□□□□□ -1.34
SRP54-207ENST00000555535 TMEM62Q0P6H9 643 aa6.68□□□□□ -1.34
SRP54-207ENST00000555535 ENOX2Q16206 610 aaKnown RBP6.68□□□□□ -1.34
SRP54-207ENST00000555535 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.68□□□□□ -1.34
SRP54-207ENST00000555535 SV2BQ7L1I2 683 aa6.68□□□□□ -1.34
SRP54-207ENST00000555535 FAM129CQ86XR2 697 aa6.68□□□□□ -1.34
SRP54-207ENST00000555535 MCATQ8IVS2 390 aaKnown RBP6.68□□□□□ -1.34
SRP54-207ENST00000555535 DPH2Q9BQC3 489 aaPredicted RBP6.68□□□□□ -1.34
SRP54-207ENST00000555535 SRRDQ9UH36 339 aa6.68□□□□□ -1.34
SRP54-207ENST00000555535 USTQ9Y2C2 406 aa6.68□□□□□ -1.34
SRP54-207ENST00000555535 GFRA2O00451 464 aa6.67□□□□□ -1.34
SRP54-207ENST00000555535 CELA3AP09093 270 aa6.67□□□□□ -1.34
SRP54-207ENST00000555535 LMNB1P20700 586 aa6.67□□□□□ -1.34
SRP54-207ENST00000555535 KIR2DL1P43626 348 aaPredicted RBP6.67□□□□□ -1.34
SRP54-207ENST00000555535 KIR2DL2P43627 348 aaPredicted RBP6.67□□□□□ -1.34
SRP54-207ENST00000555535 PLCB3Q01970 1234 aa6.67□□□□□ -1.34
SRP54-207ENST00000555535 SLC14A2Q15849 920 aa6.67□□□□□ -1.34
SRP54-207ENST00000555535 VMACQ2NL98 169 aa6.67□□□□□ -1.34
SRP54-207ENST00000555535 RNF141Q8WVD5 230 aa6.67□□□□□ -1.34
SRP54-207ENST00000555535 ADAM30Q9UKF2 790 aa6.67□□□□□ -1.34
SRP54-207ENST00000555535 RBM47A0AV96 593 aaKnown RBP6.66□□□□□ -1.34
SRP54-207ENST00000555535 NRDCO43847 1150 aa6.66□□□□□ -1.34
SRP54-207ENST00000555535 PNLIPP16233 465 aa6.66□□□□□ -1.34
SRP54-207ENST00000555535 RPS26P62854 115 aaKnown RBP6.66□□□□□ -1.34
SRP54-207ENST00000555535 ZXDAP98168 799 aa6.66□□□□□ -1.34
SRP54-207ENST00000555535 TMEFF1Q8IYR6 380 aa6.66□□□□□ -1.34
SRP54-207ENST00000555535 ZNF281Q9Y2X9 895 aa6.66□□□□□ -1.34
SRP54-207ENST00000555535 KCNC1P48547 511 aa6.65□□□□□ -1.34
SRP54-207ENST00000555535 RTP5Q14D33 572 aa6.65□□□□□ -1.34
SRP54-207ENST00000555535 RNF111Q6ZNA4 994 aa6.65□□□□□ -1.34
SRP54-207ENST00000555535 TMC7Q7Z402 723 aa6.65□□□□□ -1.34
SRP54-207ENST00000555535 SIRT2Q8IXJ6 389 aa6.65□□□□□ -1.34
SRP54-207ENST00000555535 NLGN1Q8N2Q7 840 aa6.65□□□□□ -1.34
SRP54-207ENST00000555535 CYB5D2Q8WUJ1 264 aa6.65□□□□□ -1.34
SRP54-207ENST00000555535 PWWP2AQ96N64 755 aa6.65□□□□□ -1.34
SRP54-207ENST00000555535 EBF1Q9UH73 591 aa6.65□□□□□ -1.34
SRP54-207ENST00000555535 NOTOA8MTQ0 251 aa6.64□□□□□ -1.35
SRP54-207ENST00000555535 CDR1P51861 262 aa6.64□□□□□ -1.35
SRP54-207ENST00000555535 TTBK2Q6IQ55 1244 aa6.64□□□□□ -1.35
SRP54-207ENST00000555535 G6PC3Q9BUM1 346 aa6.64□□□□□ -1.35
SRP54-207ENST00000555535 MPOP05164 745 aa6.63□□□□□ -1.35
SRP54-207ENST00000555535 GALK1P51570 392 aa6.63□□□□□ -1.35
SRP54-207ENST00000555535 ERVFRD-1P60508 538 aa6.63□□□□□ -1.35
SRP54-207ENST00000555535 KRTAP1-1Q07627 177 aa6.63□□□□□ -1.35
SRP54-207ENST00000555535 DSC3Q14574 896 aa6.63□□□□□ -1.35
SRP54-207ENST00000555535 CLEC16AQ2KHT3 1053 aa6.63□□□□□ -1.35
SRP54-207ENST00000555535 UBXN11Q5T124 520 aa6.63□□□□□ -1.35
SRP54-207ENST00000555535 DIEXFQ68CQ4 756 aaKnown RBP6.63□□□□□ -1.35
SRP54-207ENST00000555535 ENOX1Q8TC92 643 aaKnown RBP6.63□□□□□ -1.35
SRP54-207ENST00000555535 FAM8A1Q9UBU6 413 aa6.63□□□□□ -1.35
SRP54-207ENST00000555535 TNFRSF1AP19438 455 aa6.62□□□□□ -1.35
SRP54-207ENST00000555535 MAGEA10P43363 369 aaPredicted RBP6.62□□□□□ -1.35
SRP54-207ENST00000555535 CDK8P49336 464 aa6.62□□□□□ -1.35
SRP54-207ENST00000555535 MAP6Q96JE9 813 aa6.62□□□□□ -1.35
SRP54-207ENST00000555535 ASPNQ9BXN1 380 aa6.62□□□□□ -1.35
SRP54-207ENST00000555535 OSBPL7Q9BZF2 842 aa6.62□□□□□ -1.35
SRP54-207ENST00000555535 ASCC2Q9H1I8 757 aaPredicted RBP6.62□□□□□ -1.35
SRP54-207ENST00000555535 ZMYM5Q9UJ78 669 aa6.62□□□□□ -1.35
SRP54-207ENST00000555535 CARNS1A5YM72 827 aa6.61□□□□□ -1.35
SRP54-207ENST00000555535 PRICKLE3O43900 615 aaPredicted RBP6.61□□□□□ -1.35
SRP54-207ENST00000555535 ARL4AP40617 200 aa6.61□□□□□ -1.35
SRP54-207ENST00000555535 YARSP54577 528 aaKnown RBP6.61□□□□□ -1.35
SRP54-207ENST00000555535 CEP128Q6ZU80 1094 aa6.61□□□□□ -1.35
SRP54-207ENST00000555535 LDHDQ86WU2 507 aa6.61□□□□□ -1.35
SRP54-207ENST00000555535 IGDCC3Q8IVU1 814 aa6.61□□□□□ -1.35
SRP54-207ENST00000555535 SPG7Q9UQ90 795 aa6.61□□□□□ -1.35
SRP54-207ENST00000555535 TREHO43280 583 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms