RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 RIMBP2O15034 1052 aa27.81■■■□□ 2.04
TMEM260-207ENST00000555497 PRR29P0C7W0 189 aa27.81■■■□□ 2.04
TMEM260-207ENST00000555497 ZNF174Q15697 407 aa27.81■■■□□ 2.04
TMEM260-207ENST00000555497 PDILTQ8N807 584 aa27.81■■■□□ 2.04
TMEM260-207ENST00000555497 BRMS1Q9HCU9 246 aa27.81■■■□□ 2.04
TMEM260-207ENST00000555497 MAD2L2Q9UI95 211 aa27.81■■■□□ 2.04
TMEM260-207ENST00000555497 MORC2Q9Y6X9 1032 aaPredicted RBP27.81■■■□□ 2.04
TMEM260-207ENST00000555497 FLT1P17948 1338 aa27.81■■■□□ 2.04
TMEM260-207ENST00000555497 NLRP5P59047 1200 aa27.8■■■□□ 2.04
TMEM260-207ENST00000555497 GRM4Q14833 912 aa27.8■■■□□ 2.04
TMEM260-207ENST00000555497 GAKO14976 1311 aa27.8■■■□□ 2.04
TMEM260-207ENST00000555497 FAM205AQ6ZU69 1335 aa27.8■■■□□ 2.04
TMEM260-207ENST00000555497 CDK8P49336 464 aa27.8■■■□□ 2.04
TMEM260-207ENST00000555497 GTF2IP78347 998 aa27.8■■■□□ 2.04
TMEM260-207ENST00000555497 GRAMD1CQ8IYS0 662 aa27.8■■■□□ 2.04
TMEM260-207ENST00000555497 ATP6V0A2Q9Y487 856 aa27.8■■■□□ 2.04
TMEM260-207ENST00000555497 SNED1Q8TER0 1413 aa27.79■■■□□ 2.04
TMEM260-207ENST00000555497 NT5C2P49902 561 aa27.79■■■□□ 2.04
TMEM260-207ENST00000555497 DNTTIP2Q5QJE6 756 aaKnown RBP27.79■■■□□ 2.04
TMEM260-207ENST00000555497 TMEM47Q9BQJ4 181 aa27.79■■■□□ 2.04
TMEM260-207ENST00000555497 MYH1P12882 1939 aa27.79■■■□□ 2.04
TMEM260-207ENST00000555497 A0A087X0B3 334 aa27.79■■■□□ 2.04
TMEM260-207ENST00000555497 ACTN4O43707 911 aaKnown RBP27.79■■■□□ 2.04
TMEM260-207ENST00000555497 TPM2P07951 284 aa27.79■■■□□ 2.04
TMEM260-207ENST00000555497 TTC38Q5R3I4 469 aa27.79■■■□□ 2.04
TMEM260-207ENST00000555497 C16orf86Q6ZW13 317 aa27.79■■■□□ 2.04
TMEM260-207ENST00000555497 TBC1D22AQ8WUA7 517 aa27.79■■■□□ 2.04
TMEM260-207ENST00000555497 GPKOWQ92917 476 aaPredicted RBP eCLIP27.79■■■□□ 2.04
TMEM260-207ENST00000555497 AKT1S1Q96B36 256 aa27.79■■■□□ 2.04
TMEM260-207ENST00000555497 EPSTI1Q96J88 318 aa27.79■■■□□ 2.04
TMEM260-207ENST00000555497 SMTNL1A8MU46 457 aa27.78■■■□□ 2.04
TMEM260-207ENST00000555497 IKBKBO14920 756 aa27.78■■■□□ 2.04
TMEM260-207ENST00000555497 POSTNQ15063 836 aa27.78■■■□□ 2.04
TMEM260-207ENST00000555497 CERS3Q8IU89 383 aa27.78■■■□□ 2.04
TMEM260-207ENST00000555497 MTMR7Q9Y216 660 aa27.78■■■□□ 2.04
TMEM260-207ENST00000555497 SRGNP10124 158 aa27.77■■■□□ 2.04
TMEM260-207ENST00000555497 PIK3AP1Q6ZUJ8 805 aa27.77■■■□□ 2.04
TMEM260-207ENST00000555497 LRRC8AQ8IWT6 810 aa27.77■■■□□ 2.04
TMEM260-207ENST00000555497 XPO4Q9C0E2 1151 aaKnown RBP27.77■■■□□ 2.04
TMEM260-207ENST00000555497 IFNKQ9P0W0 207 aa27.77■■■□□ 2.04
TMEM260-207ENST00000555497 LMOD1P29536 600 aaPredicted RBP27.77■■■□□ 2.04
TMEM260-207ENST00000555497 RASGRP2Q7LDG7 609 aa27.77■■■□□ 2.04
TMEM260-207ENST00000555497 TMC4Q7Z404 712 aa27.77■■■□□ 2.04
TMEM260-207ENST00000555497 MAN1B1Q9UKM7 699 aa27.77■■■□□ 2.04
TMEM260-207ENST00000555497 STX8Q9UNK0 236 aa27.77■■■□□ 2.04
TMEM260-207ENST00000555497 DAGLAQ9Y4D2 1042 aa27.77■■■□□ 2.04
TMEM260-207ENST00000555497 CYTH3O43739 400 aa27.76■■■□□ 2.04
TMEM260-207ENST00000555497 PLCG2P16885 1265 aa27.76■■■□□ 2.04
TMEM260-207ENST00000555497 CCDC178Q5BJE1 867 aa27.76■■■□□ 2.04
TMEM260-207ENST00000555497 TYW1BQ6NUM6 668 aa27.76■■■□□ 2.04
TMEM260-207ENST00000555497 FILIP1Q7Z7B0 1213 aa27.76■■■□□ 2.04
TMEM260-207ENST00000555497 NRXN2Q9P2S2 1712 aa27.76■■■□□ 2.04
TMEM260-207ENST00000555497 ATP1A3P13637 1013 aa27.76■■■□□ 2.03
TMEM260-207ENST00000555497 EYA3Q99504 573 aa27.76■■■□□ 2.03
TMEM260-207ENST00000555497 RRP9O43818 475 aaKnown RBP27.75■■■□□ 2.03
TMEM260-207ENST00000555497 SARSP49591 514 aaKnown RBP27.75■■■□□ 2.03
TMEM260-207ENST00000555497 PTGDRQ13258 359 aa27.75■■■□□ 2.03
TMEM260-207ENST00000555497 NLGN1Q8N2Q7 840 aa27.75■■■□□ 2.03
TMEM260-207ENST00000555497 NT5DC1Q5TFE4 455 aa27.75■■■□□ 2.03
TMEM260-207ENST00000555497 CERS5Q8N5B7 392 aa27.75■■■□□ 2.03
TMEM260-207ENST00000555497 SMC2O95347 1197 aa27.74■■■□□ 2.03
TMEM260-207ENST00000555497 ATP2C1P98194 919 aaPredicted RBP27.74■■■□□ 2.03
TMEM260-207ENST00000555497 SLF2Q8IX21 1173 aa27.74■■■□□ 2.03
TMEM260-207ENST00000555497 SYMPKQ92797 1274 aaKnown RBP27.74■■■□□ 2.03
TMEM260-207ENST00000555497 COA1Q9GZY4 146 aa27.74■■■□□ 2.03
TMEM260-207ENST00000555497 FOCADQ5VW36 1801 aa27.74■■■□□ 2.03
TMEM260-207ENST00000555497 PALM3A6NDB9 673 aaPredicted RBP27.73■■■□□ 2.03
TMEM260-207ENST00000555497 NEDD1Q8NHV4 660 aa27.73■■■□□ 2.03
TMEM260-207ENST00000555497 FERMT2Q96AC1 680 aa27.73■■■□□ 2.03
TMEM260-207ENST00000555497 MXD3Q9BW11 206 aa27.73■■■□□ 2.03
TMEM260-207ENST00000555497 HOOK1Q9UJC3 728 aaKnown RBP27.73■■■□□ 2.03
TMEM260-207ENST00000555497 BMP15O95972 392 aa27.73■■■□□ 2.03
TMEM260-207ENST00000555497 GOLGA8HP0CJ92 632 aa27.73■■■□□ 2.03
TMEM260-207ENST00000555497 MYL5Q02045 173 aa27.73■■■□□ 2.03
TMEM260-207ENST00000555497 DHX58Q96C10 678 aa27.73■■■□□ 2.03
TMEM260-207ENST00000555497 F8W031 263 aaPredicted RBP27.72■■■□□ 2.03
TMEM260-207ENST00000555497 PLSCR1O15162 318 aa27.72■■■□□ 2.03
TMEM260-207ENST00000555497 APBA3O96018 575 aa27.72■■■□□ 2.03
TMEM260-207ENST00000555497 NPR1P16066 1061 aa27.72■■■□□ 2.03
TMEM260-207ENST00000555497 TPM4P67936 248 aa27.72■■■□□ 2.03
TMEM260-207ENST00000555497 FANCCQ00597 558 aa27.72■■■□□ 2.03
TMEM260-207ENST00000555497 BLIDQ8IZY5 108 aa27.72■■■□□ 2.03
TMEM260-207ENST00000555497 CPVLQ9H3G5 476 aa27.72■■■□□ 2.03
TMEM260-207ENST00000555497 SH3GLB2Q9NR46 395 aa27.72■■■□□ 2.03
TMEM260-207ENST00000555497 GNAQP50148 359 aa27.72■■■□□ 2.03
TMEM260-207ENST00000555497 HSP90AA2PQ14568 343 aaPredicted RBP27.72■■■□□ 2.03
TMEM260-207ENST00000555497 IL17AQ16552 155 aa27.72■■■□□ 2.03
TMEM260-207ENST00000555497 RASGRP4Q8TDF6 673 aa27.72■■■□□ 2.03
TMEM260-207ENST00000555497 ZNF287Q9HBT7 754 aa27.72■■■□□ 2.03
TMEM260-207ENST00000555497 COL11A2P13942 1736 aaPredicted RBP27.71■■■□□ 2.03
TMEM260-207ENST00000555497 UQCRHLA0A096LP55 91 aa27.71■■■□□ 2.03
TMEM260-207ENST00000555497 VWA3AA6NCI4 1184 aa27.71■■■□□ 2.03
TMEM260-207ENST00000555497 UQCRHP07919 91 aa27.71■■■□□ 2.03
TMEM260-207ENST00000555497 DOK7Q18PE1 504 aa27.71■■■□□ 2.03
TMEM260-207ENST00000555497 GLIPR1L2Q4G1C9 344 aa27.71■■■□□ 2.03
TMEM260-207ENST00000555497 WWC2Q6AWC2 1192 aa27.71■■■□□ 2.03
TMEM260-207ENST00000555497 CALML3P27482 149 aa27.71■■■□□ 2.03
TMEM260-207ENST00000555497 MCM7P33993 719 aa27.71■■■□□ 2.03
TMEM260-207ENST00000555497 MORC3Q14149 939 aa27.71■■■□□ 2.03
TMEM260-207ENST00000555497 SPATA20Q8TB22 786 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms