RNA–Protein interactions for RNA: ENST00000555430.1

EFCAB11-206, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-206ENST00000555430 RNF19AQ9NV58 838 aa4.83□□□□□ -1.64
EFCAB11-206ENST00000555430 ADAM30Q9UKF2 790 aa4.83□□□□□ -1.64
EFCAB11-206ENST00000555430 CEP131Q9UPN4 1083 aa4.83□□□□□ -1.64
EFCAB11-206ENST00000555430 HPXP02790 462 aa4.82□□□□□ -1.64
EFCAB11-206ENST00000555430 RLBP1P12271 317 aa4.82□□□□□ -1.64
EFCAB11-206ENST00000555430 GAB4Q2WGN9 574 aa4.82□□□□□ -1.64
EFCAB11-206ENST00000555430 CREG2Q8IUH2 290 aa4.82□□□□□ -1.64
EFCAB11-206ENST00000555430 ACSF2Q96CM8 615 aaPredicted RBP4.82□□□□□ -1.64
EFCAB11-206ENST00000555430 DUSP15Q9H1R2 295 aaPredicted RBP4.82□□□□□ -1.64
EFCAB11-206ENST00000555430 TRIT1Q9H3H1 467 aaKnown RBP4.82□□□□□ -1.64
EFCAB11-206ENST00000555430 TMEM59LQ9UK28 342 aa4.82□□□□□ -1.64
EFCAB11-206ENST00000555430 WASH4PA8MWX3 477 aa4.81□□□□□ -1.64
EFCAB11-206ENST00000555430 PATL2C9JE40 543 aaKnown RBP4.81□□□□□ -1.64
EFCAB11-206ENST00000555430 GRIN3BO60391 1043 aa4.81□□□□□ -1.64
EFCAB11-206ENST00000555430 HK2P52789 917 aa4.81□□□□□ -1.64
EFCAB11-206ENST00000555430 ERVFC1P60507 584 aa4.81□□□□□ -1.64
EFCAB11-206ENST00000555430 ZNF385BQ569K4 471 aa4.81□□□□□ -1.64
EFCAB11-206ENST00000555430 EAPPQ56P03 285 aaPredicted RBP4.81□□□□□ -1.64
EFCAB11-206ENST00000555430 MEI1Q5TIA1 1274 aa4.81□□□□□ -1.64
EFCAB11-206ENST00000555430 CCDC84Q86UT8 332 aaPredicted RBP4.81□□□□□ -1.64
EFCAB11-206ENST00000555430 PPP1R13LQ8WUF5 828 aa4.81□□□□□ -1.64
EFCAB11-206ENST00000555430 MYLIPQ8WY64 445 aa4.81□□□□□ -1.64
EFCAB11-206ENST00000555430 TEPSINQ96N21 525 aa4.81□□□□□ -1.64
EFCAB11-206ENST00000555430 NOC4LQ9BVI4 516 aaKnown RBP4.81□□□□□ -1.64
EFCAB11-206ENST00000555430 CNOT6Q9ULM6 557 aaKnown RBP4.81□□□□□ -1.64
EFCAB11-206ENST00000555430 ANKRD33BA6NCL7 494 aa4.8□□□□□ -1.64
EFCAB11-206ENST00000555430 FSHBP01225 129 aa4.8□□□□□ -1.64
EFCAB11-206ENST00000555430 TPP2P29144 1249 aaPredicted RBP4.8□□□□□ -1.64
EFCAB11-206ENST00000555430 ST13P50502 369 aaKnown RBP4.8□□□□□ -1.64
EFCAB11-206ENST00000555430 PLP2Q04941 152 aa4.8□□□□□ -1.64
EFCAB11-206ENST00000555430 TAF1CQ15572 869 aaPredicted RBP4.8□□□□□ -1.64
EFCAB11-206ENST00000555430 CYB5D2Q8WUJ1 264 aa4.8□□□□□ -1.64
EFCAB11-206ENST00000555430 JARID2Q92833 1246 aaPredicted RBP4.8□□□□□ -1.64
EFCAB11-206ENST00000555430 TRAIPQ9BWF2 469 aa4.8□□□□□ -1.64
EFCAB11-206ENST00000555430 GPR62Q9BZJ7 368 aa4.8□□□□□ -1.64
EFCAB11-206ENST00000555430 ADAMTS10Q9H324 1103 aa4.8□□□□□ -1.64
EFCAB11-206ENST00000555430 SLITRK6Q9H5Y7 841 aa4.8□□□□□ -1.64
EFCAB11-206ENST00000555430 GPATCH2Q9NW75 528 aa4.8□□□□□ -1.64
EFCAB11-206ENST00000555430 TIMELESSQ9UNS1 1208 aa4.8□□□□□ -1.64
EFCAB11-206ENST00000555430 TLR6Q9Y2C9 796 aa4.8□□□□□ -1.64
EFCAB11-206ENST00000555430 CORINQ9Y5Q5 1042 aa4.8□□□□□ -1.64
EFCAB11-206ENST00000555430 RFXAPO00287 272 aa4.79□□□□□ -1.64
EFCAB11-206ENST00000555430 TMEM201Q5SNT2 666 aa4.79□□□□□ -1.64
EFCAB11-206ENST00000555430 DIEXFQ68CQ4 756 aaKnown RBP4.79□□□□□ -1.64
EFCAB11-206ENST00000555430 TSPYL5Q86VY4 417 aaPredicted RBP4.79□□□□□ -1.64
EFCAB11-206ENST00000555430 DTWD2Q8NBA8 298 aa4.79□□□□□ -1.64
EFCAB11-206ENST00000555430 PHC3Q8NDX5 983 aa4.79□□□□□ -1.64
EFCAB11-206ENST00000555430 FAM13CQ8NE31 585 aa4.79□□□□□ -1.64
EFCAB11-206ENST00000555430 SP110Q9HB58 689 aa4.79□□□□□ -1.64
EFCAB11-206ENST00000555430 PARP2Q9UGN5 583 aa4.79□□□□□ -1.64
EFCAB11-206ENST00000555430 DUSP13Q9UII6 198 aa4.79□□□□□ -1.64
EFCAB11-206ENST00000555430 KCNH3Q9ULD8 1083 aa4.79□□□□□ -1.64
EFCAB11-206ENST00000555430 PALD1Q9ULE6 856 aa4.79□□□□□ -1.64
EFCAB11-206ENST00000555430 UPK3BL1B0FP48 263 aa4.78□□□□□ -1.64
EFCAB11-206ENST00000555430 UPK3BL2E5RIL1 263 aa4.78□□□□□ -1.64
EFCAB11-206ENST00000555430 CILPO75339 1184 aa4.78□□□□□ -1.64
EFCAB11-206ENST00000555430 PLCG1P19174 1290 aa4.78□□□□□ -1.64
EFCAB11-206ENST00000555430 TRHRP34981 398 aaPredicted RBP4.78□□□□□ -1.64
EFCAB11-206ENST00000555430 YARSP54577 528 aaKnown RBP4.78□□□□□ -1.64
EFCAB11-206ENST00000555430 DLG4P78352 724 aa4.78□□□□□ -1.64
EFCAB11-206ENST00000555430 DAB2P98082 770 aa4.78□□□□□ -1.64
EFCAB11-206ENST00000555430 EGR3Q06889 387 aa4.78□□□□□ -1.64
EFCAB11-206ENST00000555430 PSMD2Q13200 908 aa4.78□□□□□ -1.64
EFCAB11-206ENST00000555430 HHIPL2Q6UWX4 724 aa4.78□□□□□ -1.64
EFCAB11-206ENST00000555430 PDZD8Q8NEN9 1154 aa4.78□□□□□ -1.64
EFCAB11-206ENST00000555430 RNF141Q8WVD5 230 aa4.78□□□□□ -1.64
EFCAB11-206ENST00000555430 USP31Q70CQ4 1352 aa4.78□□□□□ -1.64
EFCAB11-206ENST00000555430 FAM221AA4D161 298 aa4.77□□□□□ -1.65
EFCAB11-206ENST00000555430 BPNT1O95861 308 aa4.77□□□□□ -1.65
EFCAB11-206ENST00000555430 CTSHP09668 335 aa4.77□□□□□ -1.65
EFCAB11-206ENST00000555430 ZGLP1P0C6A0 271 aa4.77□□□□□ -1.65
EFCAB11-206ENST00000555430 LMNB2Q03252 620 aa4.77□□□□□ -1.65
EFCAB11-206ENST00000555430 CAMK2GQ13555 558 aaPredicted RBP4.77□□□□□ -1.65
EFCAB11-206ENST00000555430 BNC2Q6ZN30 1099 aaPredicted RBP4.77□□□□□ -1.65
EFCAB11-206ENST00000555430 LILRA2Q8N149 483 aa4.77□□□□□ -1.65
EFCAB11-206ENST00000555430 RNF32Q9H0A6 362 aa4.77□□□□□ -1.65
EFCAB11-206ENST00000555430 PRR36Q9H6K5 1346 aa4.76□□□□□ -1.65
EFCAB11-206ENST00000555430 LRRN2O75325 713 aa4.76□□□□□ -1.65
EFCAB11-206ENST00000555430 SND1Q7KZF4 910 aaKnown RBP eCLIP4.76□□□□□ -1.65
EFCAB11-206ENST00000555430 TMC4Q7Z404 712 aa4.76□□□□□ -1.65
EFCAB11-206ENST00000555430 IRF2BP1Q8IU81 584 aa4.76□□□□□ -1.65
EFCAB11-206ENST00000555430 SLFN12Q8IYM2 578 aa4.76□□□□□ -1.65
EFCAB11-206ENST00000555430 OXR1Q8N573 874 aa4.76□□□□□ -1.65
EFCAB11-206ENST00000555430 FEZF2Q8TBJ5 459 aa4.76□□□□□ -1.65
EFCAB11-206ENST00000555430 GATAD2BQ8WXI9 593 aa4.76□□□□□ -1.65
EFCAB11-206ENST00000555430 C19orf44Q9H6X5 657 aa4.76□□□□□ -1.65
EFCAB11-206ENST00000555430 KCTD3Q9Y597 815 aa4.76□□□□□ -1.65
EFCAB11-206ENST00000555430 PCDHA11Q9Y5I1 949 aa4.76□□□□□ -1.65
EFCAB11-206ENST00000555430 RBM47A0AV96 593 aaKnown RBP4.75□□□□□ -1.65
EFCAB11-206ENST00000555430 FITM1A5D6W6 292 aa4.75□□□□□ -1.65
EFCAB11-206ENST00000555430 SEMA7AO75326 666 aa4.75□□□□□ -1.65
EFCAB11-206ENST00000555430 F13A1P00488 732 aa4.75□□□□□ -1.65
EFCAB11-206ENST00000555430 PF4P02776 101 aa4.75□□□□□ -1.65
EFCAB11-206ENST00000555430 LTKP29376 864 aa4.75□□□□□ -1.65
EFCAB11-206ENST00000555430 XPCQ01831 940 aaPredicted RBP4.75□□□□□ -1.65
EFCAB11-206ENST00000555430 NR0B2Q15466 257 aa4.75□□□□□ -1.65
EFCAB11-206ENST00000555430 CRB2Q5IJ48 1285 aa4.75□□□□□ -1.65
EFCAB11-206ENST00000555430 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.75□□□□□ -1.65
EFCAB11-206ENST00000555430 DHX38Q92620 1227 aaKnown RBP4.75□□□□□ -1.65
EFCAB11-206ENST00000555430 RHOVQ96L33 236 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms