RNA–Protein interactions for RNA: ENST00000555370.5

IFT43-210, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-210ENST00000555370 TCP11L1Q9NUJ3 509 aa13.57□□□□□ -0.24
IFT43-210ENST00000555370 SLC12A7Q9Y666 1083 aa13.57□□□□□ -0.24
IFT43-210ENST00000555370 POLR2AP24928 1970 aaKnown RBP13.57□□□□□ -0.24
IFT43-210ENST00000555370 A0A1W2PPC1 479 aa13.56□□□□□ -0.24
IFT43-210ENST00000555370 SHTN1A0MZ66 631 aa13.56□□□□□ -0.24
IFT43-210ENST00000555370 GOLGA8AA7E2F4 631 aa13.56□□□□□ -0.24
IFT43-210ENST00000555370 WNT10BO00744 389 aa13.56□□□□□ -0.24
IFT43-210ENST00000555370 DHX16O60231 1041 aaKnown RBP13.56□□□□□ -0.24
IFT43-210ENST00000555370 METAP2P50579 478 aaKnown RBP eCLIP13.56□□□□□ -0.24
IFT43-210ENST00000555370 RAB3GAP1Q15042 981 aa13.56□□□□□ -0.24
IFT43-210ENST00000555370 IFIT1BQ5T764 474 aaKnown RBP13.56□□□□□ -0.24
IFT43-210ENST00000555370 OTOP1Q7RTM1 612 aa13.56□□□□□ -0.24
IFT43-210ENST00000555370 RASAL3Q86YV0 1011 aa13.56□□□□□ -0.24
IFT43-210ENST00000555370 ZSCAN29Q8IWY8 852 aaPredicted RBP13.56□□□□□ -0.24
IFT43-210ENST00000555370 ZNF654Q8IZM8 581 aa13.56□□□□□ -0.24
IFT43-210ENST00000555370 FAM151AQ8WW52 585 aa13.56□□□□□ -0.24
IFT43-210ENST00000555370 ARMC5Q96C12 935 aa13.56□□□□□ -0.24
IFT43-210ENST00000555370 TRIM34Q9BYJ4 488 aa13.56□□□□□ -0.24
IFT43-210ENST00000555370 VEZTQ9HBM0 779 aa13.56□□□□□ -0.24
IFT43-210ENST00000555370 NCOA5Q9HCD5 579 aaKnown RBP13.56□□□□□ -0.24
IFT43-210ENST00000555370 PI4KBQ9UBF8 816 aa13.56□□□□□ -0.24
IFT43-210ENST00000555370 CNOT7Q9UIV1 285 aaKnown RBP13.56□□□□□ -0.24
IFT43-210ENST00000555370 TCHHQ07283 1943 aa13.56□□□□□ -0.24
IFT43-210ENST00000555370 DDTLA6NHG4 134 aaPredicted RBP13.55□□□□□ -0.24
IFT43-210ENST00000555370 TCP10L2B9ZVM9 353 aa13.55□□□□□ -0.24
IFT43-210ENST00000555370 SHMT1P34896 483 aa13.55□□□□□ -0.24
IFT43-210ENST00000555370 HMGN5P82970 282 aaKnown RBP13.55□□□□□ -0.24
IFT43-210ENST00000555370 SH3BP5LQ7L8J4 393 aa13.55□□□□□ -0.24
IFT43-210ENST00000555370 FAM83AQ86UY5 434 aa13.55□□□□□ -0.24
IFT43-210ENST00000555370 MICU3Q86XE3 530 aa13.55□□□□□ -0.24
IFT43-210ENST00000555370 DGKHQ86XP1 1220 aa13.55□□□□□ -0.24
IFT43-210ENST00000555370 RAB11FIP4Q86YS3 637 aa13.55□□□□□ -0.24
IFT43-210ENST00000555370 CRACR2BQ8N4Y2 399 aaPredicted RBP13.55□□□□□ -0.24
IFT43-210ENST00000555370 NSUN7Q8NE18 718 aaKnown RBP13.55□□□□□ -0.24
IFT43-210ENST00000555370 NEDD1Q8NHV4 660 aa13.55□□□□□ -0.24
IFT43-210ENST00000555370 SMARCC2Q8TAQ2 1214 aa13.55□□□□□ -0.24
IFT43-210ENST00000555370 MTMR10Q9NXD2 777 aa13.55□□□□□ -0.24
IFT43-210ENST00000555370 TTC28Q96AY4 2481 aa13.55□□□□□ -0.24
IFT43-210ENST00000555370 PTPDC1A2A3K4 754 aa13.54□□□□□ -0.24
IFT43-210ENST00000555370 H7C1D1 291 aa13.54□□□□□ -0.24
IFT43-210ENST00000555370 NMT2O60551 498 aa13.54□□□□□ -0.24
IFT43-210ENST00000555370 CDKL5O76039 1030 aa13.54□□□□□ -0.24
IFT43-210ENST00000555370 DDAH1O94760 285 aa13.54□□□□□ -0.24
IFT43-210ENST00000555370 CTDNEP1O95476 244 aa13.54□□□□□ -0.24
IFT43-210ENST00000555370 CALM1P0DP23 149 aa13.54□□□□□ -0.24
IFT43-210ENST00000555370 CALM2P0DP24 149 aa13.54□□□□□ -0.24
IFT43-210ENST00000555370 CALM3P0DP25 149 aa13.54□□□□□ -0.24
IFT43-210ENST00000555370 TNNI2P48788 182 aa13.54□□□□□ -0.24
IFT43-210ENST00000555370 KIF4BQ2VIQ3 1234 aa13.54□□□□□ -0.24
IFT43-210ENST00000555370 NBPF9Q3BBW0 867 aa13.54□□□□□ -0.24
IFT43-210ENST00000555370 CPLX2Q6PUV4 134 aaKnown RBP13.54□□□□□ -0.24
IFT43-210ENST00000555370 CATIPQ7Z7H3 387 aa13.54□□□□□ -0.24
IFT43-210ENST00000555370 FOXP4Q8IVH2 680 aaPredicted RBP13.54□□□□□ -0.24
IFT43-210ENST00000555370 TRPM4Q8TD43 1214 aa13.54□□□□□ -0.24
IFT43-210ENST00000555370 ANKS1AQ92625 1134 aa13.54□□□□□ -0.24
IFT43-210ENST00000555370 MYL10Q9BUA6 226 aa13.54□□□□□ -0.24
IFT43-210ENST00000555370 R3HDMLQ9H3Y0 253 aa13.54□□□□□ -0.24
IFT43-210ENST00000555370 IL17RBQ9NRM6 502 aa13.54□□□□□ -0.24
IFT43-210ENST00000555370 KIF3AQ9Y496 699 aa13.54□□□□□ -0.24
IFT43-210ENST00000555370 DOCK1Q14185 1865 aa13.54□□□□□ -0.24
IFT43-210ENST00000555370 HTTP42858 3142 aa13.54□□□□□ -0.24
IFT43-210ENST00000555370 CPLX1O14810 134 aa13.53□□□□□ -0.24
IFT43-210ENST00000555370 JAK2O60674 1132 aa13.53□□□□□ -0.24
IFT43-210ENST00000555370 PDIA4P13667 645 aaKnown RBP13.53□□□□□ -0.24
IFT43-210ENST00000555370 RXRAP19793 462 aa13.53□□□□□ -0.24
IFT43-210ENST00000555370 PDCP20941 246 aa13.53□□□□□ -0.24
IFT43-210ENST00000555370 TNFAIP1Q13829 316 aa13.53□□□□□ -0.24
IFT43-210ENST00000555370 PPP2R5BQ15173 497 aa13.53□□□□□ -0.24
IFT43-210ENST00000555370 RTN1Q16799 776 aa13.53□□□□□ -0.24
IFT43-210ENST00000555370 RBM26Q5T8P6 1007 aaKnown RBP13.53□□□□□ -0.24
IFT43-210ENST00000555370 RCSD1Q6JBY9 416 aa13.53□□□□□ -0.24
IFT43-210ENST00000555370 GPR153Q6NV75 609 aa13.53□□□□□ -0.24
IFT43-210ENST00000555370 METTL16Q86W50 562 aaKnown RBP13.53□□□□□ -0.24
IFT43-210ENST00000555370 CCDC17Q96LX7 622 aa13.53□□□□□ -0.24
IFT43-210ENST00000555370 DNAJC18Q9H819 358 aa13.53□□□□□ -0.24
IFT43-210ENST00000555370 KAT14Q9H8E8 782 aa13.53□□□□□ -0.24
IFT43-210ENST00000555370 PTPN22Q9Y2R2 807 aa13.53□□□□□ -0.24
IFT43-210ENST00000555370 LAMA3Q16787 3333 aa13.52□□□□□ -0.24
IFT43-210ENST00000555370 CCDC196A0A1B0GTZ2 297 aa13.52□□□□□ -0.25
IFT43-210ENST00000555370 BRD1O95696 1058 aa13.52□□□□□ -0.25
IFT43-210ENST00000555370 EGFRP00533 1210 aa13.52□□□□□ -0.25
IFT43-210ENST00000555370 AKR1B1P15121 316 aa13.52□□□□□ -0.25
IFT43-210ENST00000555370 PKP1Q13835 747 aa13.52□□□□□ -0.25
IFT43-210ENST00000555370 TBC1D10BQ4KMP7 808 aaPredicted RBP13.52□□□□□ -0.25
IFT43-210ENST00000555370 SAMD7Q7Z3H4 446 aa13.52□□□□□ -0.25
IFT43-210ENST00000555370 CCDC144CPQ8IYA2 1237 aa13.52□□□□□ -0.25
IFT43-210ENST00000555370 NUP133Q8WUM0 1156 aa13.52□□□□□ -0.25
IFT43-210ENST00000555370 HERC5Q9UII4 1024 aaKnown RBP13.52□□□□□ -0.25
IFT43-210ENST00000555370 STK36Q9NRP7 1315 aa13.51□□□□□ -0.25
IFT43-210ENST00000555370 IGKV6D-41A0A0C4DH26 115 aa13.51□□□□□ -0.25
IFT43-210ENST00000555370 STX6O43752 255 aa13.51□□□□□ -0.25
IFT43-210ENST00000555370 DTNBO60941 627 aa13.51□□□□□ -0.25
IFT43-210ENST00000555370 SYT1P21579 422 aa13.51□□□□□ -0.25
IFT43-210ENST00000555370 CDC27P30260 824 aa13.51□□□□□ -0.25
IFT43-210ENST00000555370 PPP4R3BQ5MIZ7 849 aa13.51□□□□□ -0.25
IFT43-210ENST00000555370 LARP1BQ659C4 914 aaKnown RBP13.51□□□□□ -0.25
IFT43-210ENST00000555370 TATDN1Q6P1N9 297 aa13.51□□□□□ -0.25
IFT43-210ENST00000555370 KRT26Q7Z3Y9 468 aa13.51□□□□□ -0.25
IFT43-210ENST00000555370 FAM184AQ8NB25 1140 aa13.51□□□□□ -0.25
IFT43-210ENST00000555370 FANCBQ8NB91 859 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms