RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 LIFRP42702 1097 aa14.91□□□□□ -0.02
SYNE2-219ENST00000555323 KIF23Q02241 960 aaPredicted RBP14.91□□□□□ -0.02
SYNE2-219ENST00000555323 MTMR2Q13614 643 aa14.91□□□□□ -0.02
SYNE2-219ENST00000555323 SART3Q15020 963 aaKnown RBP14.91□□□□□ -0.02
SYNE2-219ENST00000555323 PAXIP1Q6ZW49 1069 aaPredicted RBP14.91□□□□□ -0.02
SYNE2-219ENST00000555323 RUFY3Q7L099 469 aa14.91□□□□□ -0.02
SYNE2-219ENST00000555323 CHST3Q7LGC8 479 aa14.91□□□□□ -0.02
SYNE2-219ENST00000555323 PROCA1Q8NCQ7 364 aaPredicted RBP14.91□□□□□ -0.02
SYNE2-219ENST00000555323 GMCL1P1Q8NEA9 526 aa14.91□□□□□ -0.02
SYNE2-219ENST00000555323 LPAR1Q92633 364 aa14.91□□□□□ -0.02
SYNE2-219ENST00000555323 TBC1D32Q96NH3 1257 aa14.91□□□□□ -0.02
SYNE2-219ENST00000555323 ZIC5Q96T25 663 aa14.91□□□□□ -0.02
SYNE2-219ENST00000555323 KIF2CQ99661 725 aa14.91□□□□□ -0.02
SYNE2-219ENST00000555323 AGXT2Q9BYV1 514 aa14.91□□□□□ -0.02
SYNE2-219ENST00000555323 VCPKMTQ9H867 229 aa14.91□□□□□ -0.02
SYNE2-219ENST00000555323 MYH8P13535 1937 aa14.91□□□□□ -0.02
SYNE2-219ENST00000555323 PHIPQ8WWQ0 1821 aa14.91□□□□□ -0.02
SYNE2-219ENST00000555323 ATAD5Q96QE3 1844 aa14.91□□□□□ -0.02
SYNE2-219ENST00000555323 ERICH2A1L162 156 aa14.9□□□□□ -0.02
SYNE2-219ENST00000555323 F5H6K3 240 aa14.9□□□□□ -0.02
SYNE2-219ENST00000555323 KLRC3Q07444 240 aa14.9□□□□□ -0.02
SYNE2-219ENST00000555323 MKRN3Q13064 507 aaKnown RBP14.9□□□□□ -0.02
SYNE2-219ENST00000555323 GPAT2Q6NUI2 795 aa14.9□□□□□ -0.02
SYNE2-219ENST00000555323 IL27Q8NEV9 243 aa14.9□□□□□ -0.02
SYNE2-219ENST00000555323 BRI3BPQ8WY22 251 aa14.9□□□□□ -0.02
SYNE2-219ENST00000555323 PTPN18Q99952 460 aa14.9□□□□□ -0.02
SYNE2-219ENST00000555323 ALDH8A1Q9H2A2 487 aaPredicted RBP14.9□□□□□ -0.02
SYNE2-219ENST00000555323 CCL15-CCL14A0A0B4J2E2 113 aa14.89□□□□□ -0.03
SYNE2-219ENST00000555323 SH2B2O14492 632 aaPredicted RBP14.89□□□□□ -0.03
SYNE2-219ENST00000555323 AOC2O75106 756 aa14.89□□□□□ -0.03
SYNE2-219ENST00000555323 CASTP20810 708 aaKnown RBP14.89□□□□□ -0.03
SYNE2-219ENST00000555323 HOXA7P31268 230 aaPredicted RBP14.89□□□□□ -0.03
SYNE2-219ENST00000555323 HMGCS2P54868 508 aa14.89□□□□□ -0.03
SYNE2-219ENST00000555323 ATP2B2Q01814 1243 aa14.89□□□□□ -0.03
SYNE2-219ENST00000555323 SREBF2Q12772 1141 aa14.89□□□□□ -0.03
SYNE2-219ENST00000555323 CCL15Q16663 113 aa14.89□□□□□ -0.03
SYNE2-219ENST00000555323 TMEM67Q5HYA8 995 aa14.89□□□□□ -0.03
SYNE2-219ENST00000555323 KIAA1755Q5JYT7 1200 aa14.89□□□□□ -0.03
SYNE2-219ENST00000555323 IFIT1BQ5T764 474 aaKnown RBP14.89□□□□□ -0.03
SYNE2-219ENST00000555323 ANKRD23Q86SG2 305 aa14.89□□□□□ -0.03
SYNE2-219ENST00000555323 SGMS1Q86VZ5 419 aa14.89□□□□□ -0.03
SYNE2-219ENST00000555323 FEZ1Q99689 392 aa14.89□□□□□ -0.03
SYNE2-219ENST00000555323 LY9Q9HBG7 655 aa14.89□□□□□ -0.03
SYNE2-219ENST00000555323 GOPCQ9HD26 462 aa14.89□□□□□ -0.03
SYNE2-219ENST00000555323 ZCCHC17Q9NP64 241 aaKnown RBP14.89□□□□□ -0.03
SYNE2-219ENST00000555323 TMOD4Q9NZQ9 345 aa14.89□□□□□ -0.03
SYNE2-219ENST00000555323 SLC45A1Q9Y2W3 748 aa14.89□□□□□ -0.03
SYNE2-219ENST00000555323 CYP46A1Q9Y6A2 500 aa14.89□□□□□ -0.03
SYNE2-219ENST00000555323 SNHG28P0DPA3 235 aa14.88□□□□□ -0.03
SYNE2-219ENST00000555323 WTAPQ15007 396 aa14.88□□□□□ -0.03
SYNE2-219ENST00000555323 IFNL1Q8IU54 200 aa14.88□□□□□ -0.03
SYNE2-219ENST00000555323 GMCL1Q96IK5 515 aa14.88□□□□□ -0.03
SYNE2-219ENST00000555323 AGTPBP1Q9UPW5 1226 aa14.88□□□□□ -0.03
SYNE2-219ENST00000555323 BTBD19C9JJ37 291 aa14.87□□□□□ -0.03
SYNE2-219ENST00000555323 WDR46O15213 610 aaKnown RBP14.87□□□□□ -0.03
SYNE2-219ENST00000555323 NDUFB10O96000 172 aa14.87□□□□□ -0.03
SYNE2-219ENST00000555323 CPA1P15085 419 aa14.87□□□□□ -0.03
SYNE2-219ENST00000555323 VCAM1P19320 739 aa14.87□□□□□ -0.03
SYNE2-219ENST00000555323 EVCP57679 992 aa14.87□□□□□ -0.03
SYNE2-219ENST00000555323 TROAPQ12815 778 aa14.87□□□□□ -0.03
SYNE2-219ENST00000555323 GRM1Q13255 1194 aa14.87□□□□□ -0.03
SYNE2-219ENST00000555323 DGKZQ13574 1117 aa14.87□□□□□ -0.03
SYNE2-219ENST00000555323 SLFN13Q68D06 897 aa14.87□□□□□ -0.03
SYNE2-219ENST00000555323 LRRC47Q8N1G4 583 aaKnown RBP14.87□□□□□ -0.03
SYNE2-219ENST00000555323 PNMA1Q8ND90 353 aa14.87□□□□□ -0.03
SYNE2-219ENST00000555323 KAT14Q9H8E8 782 aa14.87□□□□□ -0.03
SYNE2-219ENST00000555323 SENP2Q9HC62 589 aa14.87□□□□□ -0.03
SYNE2-219ENST00000555323 GPHNQ9NQX3 736 aaPredicted RBP14.87□□□□□ -0.03
SYNE2-219ENST00000555323 IGF2BP3O00425 579 aaKnown RBP eCLIP14.86□□□□□ -0.03
SYNE2-219ENST00000555323 PLA2G6O60733 806 aa14.86□□□□□ -0.03
SYNE2-219ENST00000555323 PDHBP11177 359 aa14.86□□□□□ -0.03
SYNE2-219ENST00000555323 ZYXQ15942 572 aaKnown RBP14.86□□□□□ -0.03
SYNE2-219ENST00000555323 TREML2Q5T2D2 321 aa14.86□□□□□ -0.03
SYNE2-219ENST00000555323 OTUD7BQ6GQQ9 843 aa14.86□□□□□ -0.03
SYNE2-219ENST00000555323 GADL1Q6ZQY3 521 aa14.86□□□□□ -0.03
SYNE2-219ENST00000555323 CATSPERGQ6ZRH7 1159 aa14.86□□□□□ -0.03
SYNE2-219ENST00000555323 Q6ZUG5 572 aa14.86□□□□□ -0.03
SYNE2-219ENST00000555323 FAM43AQ8N2R8 423 aa14.86□□□□□ -0.03
SYNE2-219ENST00000555323 TCEANC2Q96MN5 208 aa14.86□□□□□ -0.03
SYNE2-219ENST00000555323 MAP3K14Q99558 947 aa14.86□□□□□ -0.03
SYNE2-219ENST00000555323 LRRC2Q9BYS8 371 aa14.86□□□□□ -0.03
SYNE2-219ENST00000555323 UPF3BQ9BZI7 483 aaKnown RBP14.86□□□□□ -0.03
SYNE2-219ENST00000555323 USP17L15C9J2P7 530 aa14.85□□□□□ -0.03
SYNE2-219ENST00000555323 USP17L13C9JLJ4 530 aa14.85□□□□□ -0.03
SYNE2-219ENST00000555323 USP17L11C9JVI0 530 aa14.85□□□□□ -0.03
SYNE2-219ENST00000555323 USP17L18D6R9N7 530 aa14.85□□□□□ -0.03
SYNE2-219ENST00000555323 USP17L22D6RA61 530 aa14.85□□□□□ -0.03
SYNE2-219ENST00000555323 USP17L17D6RBQ6 530 aa14.85□□□□□ -0.03
SYNE2-219ENST00000555323 USP17L19D6RCP7 530 aa14.85□□□□□ -0.03
SYNE2-219ENST00000555323 USP17L20D6RJB6 530 aa14.85□□□□□ -0.03
SYNE2-219ENST00000555323 ALDH1A1P00352 501 aa14.85□□□□□ -0.03
SYNE2-219ENST00000555323 USP17L24Q0WX57 530 aa14.85□□□□□ -0.03
SYNE2-219ENST00000555323 PABPC4Q13310 644 aaKnown RBP eCLIP14.85□□□□□ -0.03
SYNE2-219ENST00000555323 TOB2Q14106 344 aaPredicted RBP14.85□□□□□ -0.03
SYNE2-219ENST00000555323 SPICE1Q8N0Z3 855 aa14.85□□□□□ -0.03
SYNE2-219ENST00000555323 DCAF4Q8WV16 495 aa14.85□□□□□ -0.03
SYNE2-219ENST00000555323 CFHR5Q9BXR6 569 aa14.85□□□□□ -0.03
SYNE2-219ENST00000555323 PDRG1Q9NUG6 133 aa14.85□□□□□ -0.03
SYNE2-219ENST00000555323 PTPRFP10586 1907 aa14.84□□□□□ -0.03
SYNE2-219ENST00000555323 CCDC69A6NI79 296 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms