RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 AGRPO00253 132 aa8□□□□□ -1.13
CKS1BP1-201ENST00000555221 TP53P04637 393 aaPredicted RBP8□□□□□ -1.13
CKS1BP1-201ENST00000555221 ANKRD39Q53RE8 183 aa8□□□□□ -1.13
CKS1BP1-201ENST00000555221 HEATR6Q6AI08 1181 aaKnown RBP8□□□□□ -1.13
CKS1BP1-201ENST00000555221 RIN3Q8TB24 985 aa8□□□□□ -1.13
CKS1BP1-201ENST00000555221 FBXL18Q96ME1 805 aa8□□□□□ -1.13
CKS1BP1-201ENST00000555221 HAUS7Q99871 368 aa8□□□□□ -1.13
CKS1BP1-201ENST00000555221 FAM86C1Q9NVL1 165 aa8□□□□□ -1.13
CKS1BP1-201ENST00000555221 FAM87AP0C7U9 286 aa7.99□□□□□ -1.13
CKS1BP1-201ENST00000555221 KCNMA1Q12791 1236 aa7.99□□□□□ -1.13
CKS1BP1-201ENST00000555221 TCEAL1Q15170 157 aa7.99□□□□□ -1.13
CKS1BP1-201ENST00000555221 AXDND1Q5T1B0 1012 aaPredicted RBP7.99□□□□□ -1.13
CKS1BP1-201ENST00000555221 VWCEQ96DN2 955 aa7.99□□□□□ -1.13
CKS1BP1-201ENST00000555221 ZNF512BQ96KM6 892 aaPredicted RBP7.99□□□□□ -1.13
CKS1BP1-201ENST00000555221 RNPC3Q96LT9 517 aaKnown RBP7.99□□□□□ -1.13
CKS1BP1-201ENST00000555221 TBC1D32Q96NH3 1257 aa7.99□□□□□ -1.13
CKS1BP1-201ENST00000555221 APBA2Q99767 749 aa7.99□□□□□ -1.13
CKS1BP1-201ENST00000555221 GBP3Q9H0R5 595 aa7.99□□□□□ -1.13
CKS1BP1-201ENST00000555221 C7orf69Q9H7B7 122 aa7.99□□□□□ -1.13
CKS1BP1-201ENST00000555221 PRDM5Q9NQX1 630 aaPredicted RBP7.99□□□□□ -1.13
CKS1BP1-201ENST00000555221 ZMYM5Q9UJ78 669 aa7.99□□□□□ -1.13
CKS1BP1-201ENST00000555221 HMX2A2RU54 273 aa7.98□□□□□ -1.13
CKS1BP1-201ENST00000555221 EOMESO95936 686 aa7.98□□□□□ -1.13
CKS1BP1-201ENST00000555221 EPHX1P07099 455 aa7.98□□□□□ -1.13
CKS1BP1-201ENST00000555221 CYP27A1Q02318 531 aa7.98□□□□□ -1.13
CKS1BP1-201ENST00000555221 RASSF7Q02833 373 aa7.98□□□□□ -1.13
CKS1BP1-201ENST00000555221 SSRP1Q08945 709 aaKnown RBP7.98□□□□□ -1.13
CKS1BP1-201ENST00000555221 SLC10A6Q3KNW5 377 aa7.98□□□□□ -1.13
CKS1BP1-201ENST00000555221 CYP27C1Q4G0S4 372 aa7.98□□□□□ -1.13
CKS1BP1-201ENST00000555221 OGFOD3Q6PK18 319 aa7.98□□□□□ -1.13
CKS1BP1-201ENST00000555221 ZAR1Q86SH2 424 aa7.98□□□□□ -1.13
CKS1BP1-201ENST00000555221 LRRC47Q8N1G4 583 aaKnown RBP7.98□□□□□ -1.13
CKS1BP1-201ENST00000555221 NLGN1Q8N2Q7 840 aa7.98□□□□□ -1.13
CKS1BP1-201ENST00000555221 SH3TC2Q8TF17 1288 aa7.98□□□□□ -1.13
CKS1BP1-201ENST00000555221 GTF2IRD1Q9UHL9 959 aa7.98□□□□□ -1.13
CKS1BP1-201ENST00000555221 PFDN2Q9UHV9 154 aa7.98□□□□□ -1.13
CKS1BP1-201ENST00000555221 COL17A1Q9UMD9 1497 aaPredicted RBP7.98□□□□□ -1.13
CKS1BP1-201ENST00000555221 CLSTN1O94985 981 aa7.97□□□□□ -1.13
CKS1BP1-201ENST00000555221 HSD3B2P26439 372 aa7.97□□□□□ -1.13
CKS1BP1-201ENST00000555221 KIR3DL1P43629 444 aa7.97□□□□□ -1.13
CKS1BP1-201ENST00000555221 AUHQ13825 339 aaKnown RBP7.97□□□□□ -1.13
CKS1BP1-201ENST00000555221 SFRP5Q5T4F7 317 aa7.97□□□□□ -1.13
CKS1BP1-201ENST00000555221 PRR23CQ6ZRP0 262 aa7.97□□□□□ -1.13
CKS1BP1-201ENST00000555221 SPATC1Q76KD6 591 aa7.97□□□□□ -1.13
CKS1BP1-201ENST00000555221 C7orf61Q8IZ16 206 aa7.97□□□□□ -1.13
CKS1BP1-201ENST00000555221 LILRB2Q8N423 598 aa7.97□□□□□ -1.13
CKS1BP1-201ENST00000555221 THAP3Q8WTV1 239 aaPredicted RBP7.97□□□□□ -1.13
CKS1BP1-201ENST00000555221 SGSM3Q96HU1 749 aa7.97□□□□□ -1.13
CKS1BP1-201ENST00000555221 KLHL25Q9H0H3 589 aa7.97□□□□□ -1.13
CKS1BP1-201ENST00000555221 PCDHB12Q9Y5F1 795 aa7.97□□□□□ -1.13
CKS1BP1-201ENST00000555221 KDM2BQ8NHM5 1336 aa7.97□□□□□ -1.13
CKS1BP1-201ENST00000555221 ENPP3O14638 875 aa7.96□□□□□ -1.14
CKS1BP1-201ENST00000555221 CBFA2T2O43439 604 aa7.96□□□□□ -1.14
CKS1BP1-201ENST00000555221 LEFTY1O75610 366 aa7.96□□□□□ -1.14
CKS1BP1-201ENST00000555221 PPM1BO75688 479 aa7.96□□□□□ -1.14
CKS1BP1-201ENST00000555221 NBPF9Q3BBW0 867 aa7.96□□□□□ -1.14
CKS1BP1-201ENST00000555221 SV2CQ496J9 727 aa7.96□□□□□ -1.14
CKS1BP1-201ENST00000555221 C2orf27AQ580R0 203 aa7.96□□□□□ -1.14
CKS1BP1-201ENST00000555221 DCAF15Q66K64 600 aa7.96□□□□□ -1.14
CKS1BP1-201ENST00000555221 RNF43Q68DV7 783 aa7.96□□□□□ -1.14
CKS1BP1-201ENST00000555221 GATA6Q92908 595 aa7.96□□□□□ -1.14
CKS1BP1-201ENST00000555221 SPATA9Q9BWV2 254 aa7.96□□□□□ -1.14
CKS1BP1-201ENST00000555221 CWC22Q9HCG8 908 aaKnown RBP7.96□□□□□ -1.14
CKS1BP1-201ENST00000555221 WHRNQ9P202 907 aa7.96□□□□□ -1.14
CKS1BP1-201ENST00000555221 SUSD2Q9UGT4 822 aa7.96□□□□□ -1.14
CKS1BP1-201ENST00000555221 KCNH3Q9ULD8 1083 aa7.96□□□□□ -1.14
CKS1BP1-201ENST00000555221 IGF2BP3O00425 579 aaKnown RBP eCLIP7.95□□□□□ -1.14
CKS1BP1-201ENST00000555221 DIAPH1O60610 1272 aaKnown RBP7.95□□□□□ -1.14
CKS1BP1-201ENST00000555221 ITGA4P13612 1032 aa7.95□□□□□ -1.14
CKS1BP1-201ENST00000555221 LONRF2Q1L5Z9 754 aa7.95□□□□□ -1.14
CKS1BP1-201ENST00000555221 ADAT2Q7Z6V5 191 aaKnown RBP7.95□□□□□ -1.14
CKS1BP1-201ENST00000555221 JMYQ8N9B5 988 aa7.95□□□□□ -1.14
CKS1BP1-201ENST00000555221 PRR13Q9NZ81 148 aa7.95□□□□□ -1.14
CKS1BP1-201ENST00000555221 LRP2BPQ9P2M1 347 aa7.95□□□□□ -1.14
CKS1BP1-201ENST00000555221 FBXL21Q9UKT6 434 aa7.95□□□□□ -1.14
CKS1BP1-201ENST00000555221 GSC2O15499 205 aa7.94□□□□□ -1.14
CKS1BP1-201ENST00000555221 CD247P20963 164 aa7.94□□□□□ -1.14
CKS1BP1-201ENST00000555221 ADMP35318 185 aa7.94□□□□□ -1.14
CKS1BP1-201ENST00000555221 ZC3H12BQ5HYM0 836 aaKnown RBP7.94□□□□□ -1.14
CKS1BP1-201ENST00000555221 DUSP27Q5VZP5 1158 aa7.94□□□□□ -1.14
CKS1BP1-201ENST00000555221 C22orf34Q6ZV56 151 aa7.94□□□□□ -1.14
CKS1BP1-201ENST00000555221 HOMER1Q86YM7 354 aa7.94□□□□□ -1.14
CKS1BP1-201ENST00000555221 CRACR2BQ8N4Y2 399 aaPredicted RBP7.94□□□□□ -1.14
CKS1BP1-201ENST00000555221 APPBP2Q92624 585 aa7.94□□□□□ -1.14
CKS1BP1-201ENST00000555221 GP6Q9HCN6 339 aa7.94□□□□□ -1.14
CKS1BP1-201ENST00000555221 TPSG1Q9NRR2 321 aa7.94□□□□□ -1.14
CKS1BP1-201ENST00000555221 SUGT1Q9Y2Z0 365 aa7.94□□□□□ -1.14
CKS1BP1-201ENST00000555221 ZNF451Q9Y4E5 1061 aa7.94□□□□□ -1.14
CKS1BP1-201ENST00000555221 A0A087WZG4 1122 aa7.93□□□□□ -1.14
CKS1BP1-201ENST00000555221 GNAT3A8MTJ3 354 aa7.93□□□□□ -1.14
CKS1BP1-201ENST00000555221 NOP56O00567 594 aaKnown RBP7.93□□□□□ -1.14
CKS1BP1-201ENST00000555221 SHOXO15266 292 aa7.93□□□□□ -1.14
CKS1BP1-201ENST00000555221 CDC45O75419 566 aa7.93□□□□□ -1.14
CKS1BP1-201ENST00000555221 GDF11O95390 407 aa7.93□□□□□ -1.14
CKS1BP1-201ENST00000555221 NOL9Q5SY16 702 aaKnown RBP7.93□□□□□ -1.14
CKS1BP1-201ENST00000555221 FAM214BQ7L5A3 538 aa7.93□□□□□ -1.14
CKS1BP1-201ENST00000555221 FBXL6Q8N531 539 aa7.93□□□□□ -1.14
CKS1BP1-201ENST00000555221 ZSWIM2Q8NEG5 633 aa7.93□□□□□ -1.14
CKS1BP1-201ENST00000555221 PPP1R14AQ96A00 147 aa7.93□□□□□ -1.14
CKS1BP1-201ENST00000555221 FGD4Q96M96 766 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms