RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 ZNF444Q8N0Y2 327 aaPredicted RBP24.29■■□□□ 1.48
ARHGEF40-204ENST00000555038 SPATA20Q8TB22 786 aa24.29■■□□□ 1.48
ARHGEF40-204ENST00000555038 LZTS2Q9BRK4 669 aa24.29■■□□□ 1.48
ARHGEF40-204ENST00000555038 RRP9O43818 475 aaKnown RBP24.29■■□□□ 1.48
ARHGEF40-204ENST00000555038 ATP2B1P20020 1258 aa24.29■■□□□ 1.48
ARHGEF40-204ENST00000555038 ATP2C1P98194 919 aaPredicted RBP24.29■■□□□ 1.48
ARHGEF40-204ENST00000555038 DIXDC1Q155Q3 683 aa24.29■■□□□ 1.48
ARHGEF40-204ENST00000555038 SPECC1Q5M775 1068 aa24.29■■□□□ 1.48
ARHGEF40-204ENST00000555038 HSD3B7Q9H2F3 369 aa24.29■■□□□ 1.48
ARHGEF40-204ENST00000555038 IL17RBQ9NRM6 502 aa24.29■■□□□ 1.48
ARHGEF40-204ENST00000555038 MAN1B1Q9UKM7 699 aa24.29■■□□□ 1.48
ARHGEF40-204ENST00000555038 DDX60LQ5H9U9 1706 aaKnown RBP24.28■■□□□ 1.48
ARHGEF40-204ENST00000555038 hCG_1642624A0A1W2PR95 340 aa24.28■■□□□ 1.48
ARHGEF40-204ENST00000555038 NRDCO43847 1150 aa24.28■■□□□ 1.48
ARHGEF40-204ENST00000555038 TSPY3P0CV98 308 aa24.28■■□□□ 1.48
ARHGEF40-204ENST00000555038 TSPY8P0CW00 308 aa24.28■■□□□ 1.48
ARHGEF40-204ENST00000555038 SKILP12757 684 aa24.28■■□□□ 1.48
ARHGEF40-204ENST00000555038 MORC3Q14149 939 aa24.28■■□□□ 1.48
ARHGEF40-204ENST00000555038 EARS2Q5JPH6 523 aaKnown RBP24.28■■□□□ 1.48
ARHGEF40-204ENST00000555038 GALNT17Q6IS24 598 aa24.28■■□□□ 1.48
ARHGEF40-204ENST00000555038 TGFBRAP1Q8WUH2 860 aa24.28■■□□□ 1.48
ARHGEF40-204ENST00000555038 BTDP43251 543 aa24.27■■□□□ 1.48
ARHGEF40-204ENST00000555038 KCNJ6P48051 423 aa24.27■■□□□ 1.48
ARHGEF40-204ENST00000555038 CCZ1BP86790 482 aa24.27■■□□□ 1.48
ARHGEF40-204ENST00000555038 CCZ1P86791 482 aaPredicted RBP24.27■■□□□ 1.48
ARHGEF40-204ENST00000555038 GAKO14976 1311 aa24.27■■□□□ 1.48
ARHGEF40-204ENST00000555038 FAM205AQ6ZU69 1335 aa24.27■■□□□ 1.48
ARHGEF40-204ENST00000555038 FAM205CA6NFA0 338 aa24.26■■□□□ 1.47
ARHGEF40-204ENST00000555038 SLFN14P0C7P3 912 aa24.26■■□□□ 1.47
ARHGEF40-204ENST00000555038 LMOD1P29536 600 aaPredicted RBP24.26■■□□□ 1.47
ARHGEF40-204ENST00000555038 TBC1D16Q8TBP0 767 aa24.26■■□□□ 1.47
ARHGEF40-204ENST00000555038 LTBP1Q14766 1721 aa24.26■■□□□ 1.47
ARHGEF40-204ENST00000555038 POLRMTO00411 1230 aaKnown RBP24.26■■□□□ 1.47
ARHGEF40-204ENST00000555038 GRIK5Q16478 980 aa24.26■■□□□ 1.47
ARHGEF40-204ENST00000555038 ISM2Q6H9L7 571 aa24.26■■□□□ 1.47
ARHGEF40-204ENST00000555038 ENOX1Q8TC92 643 aaKnown RBP24.26■■□□□ 1.47
ARHGEF40-204ENST00000555038 CDK5RAP2Q96SN8 1893 aa24.25■■□□□ 1.47
ARHGEF40-204ENST00000555038 C16orf86Q6ZW13 317 aa24.25■■□□□ 1.47
ARHGEF40-204ENST00000555038 SH3RF1Q7Z6J0 888 aa24.25■■□□□ 1.47
ARHGEF40-204ENST00000555038 CCDC148Q8NFR7 591 aa24.25■■□□□ 1.47
ARHGEF40-204ENST00000555038 DYNLL2Q96FJ2 89 aa24.25■■□□□ 1.47
ARHGEF40-204ENST00000555038 MAP7D2Q96T17 732 aa24.25■■□□□ 1.47
ARHGEF40-204ENST00000555038 SUGT1Q9Y2Z0 365 aa24.25■■□□□ 1.47
ARHGEF40-204ENST00000555038 FOXN1O15353 648 aa24.24■■□□□ 1.47
ARHGEF40-204ENST00000555038 RASA1P20936 1047 aa24.24■■□□□ 1.47
ARHGEF40-204ENST00000555038 BMP6P22004 513 aa24.24■■□□□ 1.47
ARHGEF40-204ENST00000555038 ERCC5P28715 1186 aaPredicted RBP24.24■■□□□ 1.47
ARHGEF40-204ENST00000555038 ARL6IP4Q66PJ3 421 aaKnown RBP24.24■■□□□ 1.47
ARHGEF40-204ENST00000555038 TMC6Q7Z403 805 aa24.24■■□□□ 1.47
ARHGEF40-204ENST00000555038 MTERF4Q7Z6M4 381 aaKnown RBP24.24■■□□□ 1.47
ARHGEF40-204ENST00000555038 SP8Q8IXZ3 490 aa24.24■■□□□ 1.47
ARHGEF40-204ENST00000555038 TEX11Q8IYF3 940 aa24.24■■□□□ 1.47
ARHGEF40-204ENST00000555038 DAGLBQ8NCG7 672 aa24.24■■□□□ 1.47
ARHGEF40-204ENST00000555038 PCDHA4Q9UN74 947 aa24.24■■□□□ 1.47
ARHGEF40-204ENST00000555038 UBASH3AP57075 661 aa24.24■■□□□ 1.47
ARHGEF40-204ENST00000555038 DDR1Q08345 913 aa24.24■■□□□ 1.47
ARHGEF40-204ENST00000555038 TPD52L1Q16890 204 aaPredicted RBP24.24■■□□□ 1.47
ARHGEF40-204ENST00000555038 MAPKAPK5Q8IW41 473 aa24.24■■□□□ 1.47
ARHGEF40-204ENST00000555038 BLIDQ8IZY5 108 aa24.24■■□□□ 1.47
ARHGEF40-204ENST00000555038 QTRT2Q9H974 415 aaKnown RBP24.24■■□□□ 1.47
ARHGEF40-204ENST00000555038 MAD2L2Q9UI95 211 aa24.24■■□□□ 1.47
ARHGEF40-204ENST00000555038 SERPINC1P01008 464 aa24.23■■□□□ 1.47
ARHGEF40-204ENST00000555038 SFPQP23246 707 aaKnown RBP eCLIP24.23■■□□□ 1.47
ARHGEF40-204ENST00000555038 KRT27Q7Z3Y8 459 aa24.23■■□□□ 1.47
ARHGEF40-204ENST00000555038 NEDD1Q8NHV4 660 aa24.23■■□□□ 1.47
ARHGEF40-204ENST00000555038 SYMPKQ92797 1274 aaKnown RBP24.23■■□□□ 1.47
ARHGEF40-204ENST00000555038 GPR101Q96P66 508 aaPredicted RBP24.23■■□□□ 1.47
ARHGEF40-204ENST00000555038 PAXBP1Q9Y5B6 917 aa24.23■■□□□ 1.47
ARHGEF40-204ENST00000555038 PRR29P0C7W0 189 aa24.22■■□□□ 1.47
ARHGEF40-204ENST00000555038 SMARCA1P28370 1054 aa24.22■■□□□ 1.47
ARHGEF40-204ENST00000555038 PLCD1P51178 756 aa24.22■■□□□ 1.47
ARHGEF40-204ENST00000555038 PTGDRQ13258 359 aa24.22■■□□□ 1.47
ARHGEF40-204ENST00000555038 ARID5BQ14865 1188 aa24.22■■□□□ 1.47
ARHGEF40-204ENST00000555038 ZNF174Q15697 407 aa24.22■■□□□ 1.47
ARHGEF40-204ENST00000555038 MFSD14BQ5SR56 506 aa24.22■■□□□ 1.47
ARHGEF40-204ENST00000555038 PIK3AP1Q6ZUJ8 805 aa24.22■■□□□ 1.47
ARHGEF40-204ENST00000555038 USP49Q70CQ1 688 aa24.22■■□□□ 1.47
ARHGEF40-204ENST00000555038 POLLQ9UGP5 575 aa24.22■■□□□ 1.47
ARHGEF40-204ENST00000555038 PALM3A6NDB9 673 aaPredicted RBP24.21■■□□□ 1.47
ARHGEF40-204ENST00000555038 SLC51AQ86UW1 340 aa24.21■■□□□ 1.47
ARHGEF40-204ENST00000555038 PDILTQ8N807 584 aa24.21■■□□□ 1.47
ARHGEF40-204ENST00000555038 DHX58Q96C10 678 aa24.21■■□□□ 1.47
ARHGEF40-204ENST00000555038 GSDMAQ96QA5 445 aa24.21■■□□□ 1.47
ARHGEF40-204ENST00000555038 FLT1P17948 1338 aa24.21■■□□□ 1.47
ARHGEF40-204ENST00000555038 SNED1Q8TER0 1413 aa24.21■■□□□ 1.47
ARHGEF40-204ENST00000555038 KIF2AO00139 706 aaPredicted RBP24.21■■□□□ 1.47
ARHGEF40-204ENST00000555038 ATP1A3P13637 1013 aa24.21■■□□□ 1.47
ARHGEF40-204ENST00000555038 TNNT1P13805 278 aa24.21■■□□□ 1.47
ARHGEF40-204ENST00000555038 CDK8P49336 464 aa24.21■■□□□ 1.47
ARHGEF40-204ENST00000555038 RHBDL3P58872 404 aa24.21■■□□□ 1.47
ARHGEF40-204ENST00000555038 CCDC112Q8NEF3 446 aa24.21■■□□□ 1.47
ARHGEF40-204ENST00000555038 TMEM47Q9BQJ4 181 aa24.21■■□□□ 1.47
ARHGEF40-204ENST00000555038 SPZ1Q9BXG8 430 aa24.21■■□□□ 1.47
ARHGEF40-204ENST00000555038 COA1Q9GZY4 146 aa24.21■■□□□ 1.47
ARHGEF40-204ENST00000555038 FANCLQ9NW38 375 aa24.21■■□□□ 1.47
ARHGEF40-204ENST00000555038 USP17L3A6NCW0 530 aa24.2■■□□□ 1.46
ARHGEF40-204ENST00000555038 USP17L4A6NCW7 530 aa24.2■■□□□ 1.46
ARHGEF40-204ENST00000555038 PPEF1O14829 653 aaPredicted RBP24.2■■□□□ 1.46
ARHGEF40-204ENST00000555038 USP17L1Q7RTZ2 530 aa24.2■■□□□ 1.46
ARHGEF40-204ENST00000555038 IQUBQ8NA54 791 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms