RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	IGF2BP3	O00425	579 aa	Known RBP eCLIP	8.21	□□□□□ -1.1
PSMC6-208	ENST00000554956	CD96	P40200	585 aa		8.21	□□□□□ -1.1
PSMC6-208	ENST00000554956	RBM25	P49756	843 aa	Known RBP	8.21	□□□□□ -1.1
PSMC6-208	ENST00000554956	CLC	Q05315	142 aa		8.21	□□□□□ -1.1
PSMC6-208	ENST00000554956	BNIP3	Q12983	259 aa		8.21	□□□□□ -1.1
PSMC6-208	ENST00000554956	GK5	Q6ZS86	529 aa		8.21	□□□□□ -1.1
PSMC6-208	ENST00000554956	NT5DC4	Q86YG4	428 aa		8.21	□□□□□ -1.1
PSMC6-208	ENST00000554956	WFDC3	Q8IUB2	231 aa		8.21	□□□□□ -1.1
PSMC6-208	ENST00000554956	DNAJB8	Q8NHS0	232 aa		8.21	□□□□□ -1.1
PSMC6-208	ENST00000554956	ANGEL1	Q9UNK9	670 aa	Known RBP	8.21	□□□□□ -1.1
PSMC6-208	ENST00000554956	MAPK8IP1	Q9UQF2	711 aa		8.21	□□□□□ -1.1
PSMC6-208	ENST00000554956	HECW2	Q9P2P5	1572 aa		8.21	□□□□□ -1.1
PSMC6-208	ENST00000554956	SAMD9	Q5K651	1589 aa		8.2	□□□□□ -1.1
PSMC6-208	ENST00000554956	WNT11	O96014	354 aa		8.2	□□□□□ -1.1
PSMC6-208	ENST00000554956	MCM4	P33991	863 aa		8.2	□□□□□ -1.1
PSMC6-208	ENST00000554956	YARS	P54577	528 aa	Known RBP	8.2	□□□□□ -1.1
PSMC6-208	ENST00000554956	GP2	P55259	537 aa	Known RBP	8.2	□□□□□ -1.1
PSMC6-208	ENST00000554956	IFI16	Q16666	785 aa	Known RBP	8.2	□□□□□ -1.1
PSMC6-208	ENST00000554956	NKPD1	Q17RQ9	610 aa		8.2	□□□□□ -1.1
PSMC6-208	ENST00000554956	SPACA3	Q8IXA5	215 aa		8.2	□□□□□ -1.1
PSMC6-208	ENST00000554956	FLCN	Q8NFG4	579 aa		8.2	□□□□□ -1.1
PSMC6-208	ENST00000554956	PPP1R13L	Q8WUF5	828 aa		8.2	□□□□□ -1.1
PSMC6-208	ENST00000554956	CYB5D2	Q8WUJ1	264 aa		8.2	□□□□□ -1.1
PSMC6-208	ENST00000554956	BCL7C	Q8WUZ0	217 aa	Predicted RBP	8.2	□□□□□ -1.1
PSMC6-208	ENST00000554956	NKD1	Q969G9	470 aa		8.2	□□□□□ -1.1
PSMC6-208	ENST00000554956	MKNK2	Q9HBH9	465 aa		8.2	□□□□□ -1.1
PSMC6-208	ENST00000554956	OAS3	Q9Y6K5	1087 aa	Known RBP	8.2	□□□□□ -1.1
PSMC6-208	ENST00000554956	CFAP43	Q8NDM7	1665 aa		8.19	□□□□□ -1.1
PSMC6-208	ENST00000554956	GNAT3	A8MTJ3	354 aa		8.19	□□□□□ -1.1
PSMC6-208	ENST00000554956	CBX7	O95931	251 aa		8.19	□□□□□ -1.1
PSMC6-208	ENST00000554956	SFRP5	Q5T4F7	317 aa		8.19	□□□□□ -1.1
PSMC6-208	ENST00000554956	SPRED2	Q7Z698	418 aa		8.19	□□□□□ -1.1
PSMC6-208	ENST00000554956	TNKS2	Q9H2K2	1166 aa		8.19	□□□□□ -1.1
PSMC6-208	ENST00000554956	ANTXR1	Q9H6X2	564 aa		8.19	□□□□□ -1.1
PSMC6-208	ENST00000554956	ATE1	O95260	518 aa		8.18	□□□□□ -1.1
PSMC6-208	ENST00000554956	SLITRK4	Q8IW52	837 aa		8.18	□□□□□ -1.1
PSMC6-208	ENST00000554956	SLFN12	Q8IYM2	578 aa		8.18	□□□□□ -1.1
PSMC6-208	ENST00000554956	ZNF654	Q8IZM8	581 aa		8.18	□□□□□ -1.1
PSMC6-208	ENST00000554956	BAHD1	Q8TBE0	780 aa	Predicted RBP	8.18	□□□□□ -1.1
PSMC6-208	ENST00000554956	EHMT1	Q9H9B1	1298 aa		8.18	□□□□□ -1.1
PSMC6-208	ENST00000554956	PAK6	Q9NQU5	681 aa	Predicted RBP	8.18	□□□□□ -1.1
PSMC6-208	ENST00000554956	SLC22A31	A6NKX4	558 aa		8.17	□□□□□ -1.1
PSMC6-208	ENST00000554956	PAK2	Q13177	524 aa		8.17	□□□□□ -1.1
PSMC6-208	ENST00000554956	ARSH	Q5FYA8	562 aa		8.17	□□□□□ -1.1
PSMC6-208	ENST00000554956	OVOS1	Q6IE37	1185 aa		8.17	□□□□□ -1.1
PSMC6-208	ENST00000554956	MFSD4A	Q8N468	514 aa		8.17	□□□□□ -1.1
PSMC6-208	ENST00000554956	KIF2C	Q99661	725 aa		8.17	□□□□□ -1.1
PSMC6-208	ENST00000554956	CEP131	Q9UPN4	1083 aa		8.17	□□□□□ -1.1
PSMC6-208	ENST00000554956	SLC5A6	Q9Y289	635 aa		8.17	□□□□□ -1.1
PSMC6-208	ENST00000554956	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	8.17	□□□□□ -1.1
PSMC6-208	ENST00000554956	CAPN6	Q9Y6Q1	641 aa		8.17	□□□□□ -1.1
PSMC6-208	ENST00000554956	ABCA9	Q8IUA7	1624 aa		8.17	□□□□□ -1.1
PSMC6-208	ENST00000554956	TMEM265	A0A087WTH1	108 aa		8.16	□□□□□ -1.1
PSMC6-208	ENST00000554956	PLEKHD1	A6NEE1	506 aa		8.16	□□□□□ -1.1
PSMC6-208	ENST00000554956	KIF21B	O75037	1637 aa		8.16	□□□□□ -1.1
PSMC6-208	ENST00000554956	ZNF865	P0CJ78	1059 aa	Predicted RBP	8.16	□□□□□ -1.1
PSMC6-208	ENST00000554956	POLR2B	P30876	1174 aa	Known RBP	8.16	□□□□□ -1.1
PSMC6-208	ENST00000554956	ETV3	P41162	512 aa		8.16	□□□□□ -1.1
PSMC6-208	ENST00000554956	AOC3	Q16853	763 aa		8.16	□□□□□ -1.1
PSMC6-208	ENST00000554956	CDKAL1	Q5VV42	579 aa		8.16	□□□□□ -1.1
PSMC6-208	ENST00000554956	ZNF746	Q6NUN9	644 aa	Predicted RBP	8.16	□□□□□ -1.1
PSMC6-208	ENST00000554956	PHLDB1	Q86UU1	1377 aa		8.16	□□□□□ -1.1
PSMC6-208	ENST00000554956	PHACTR4	Q8IZ21	702 aa		8.16	□□□□□ -1.1
PSMC6-208	ENST00000554956	ABI1	Q8IZP0	508 aa		8.16	□□□□□ -1.1
PSMC6-208	ENST00000554956	RAPGEF6	Q8TEU7	1601 aa		8.16	□□□□□ -1.1
PSMC6-208	ENST00000554956	NEO1	Q92859	1461 aa		8.16	□□□□□ -1.1
PSMC6-208	ENST00000554956	HRASLS5	Q96KN8	279 aa		8.16	□□□□□ -1.1
PSMC6-208	ENST00000554956	GMIP	Q9P107	970 aa		8.16	□□□□□ -1.1
PSMC6-208	ENST00000554956	FRMPD1	Q5SYB0	1578 aa		8.15	□□□□□ -1.1
PSMC6-208	ENST00000554956	PTPRM	P28827	1452 aa		8.15	□□□□□ -1.1
PSMC6-208	ENST00000554956	EEA1	Q15075	1411 aa		8.15	□□□□□ -1.1
PSMC6-208	ENST00000554956	FAM155A	B1AL88	458 aa	Predicted RBP	8.15	□□□□□ -1.1
PSMC6-208	ENST00000554956	CD8B	P10966	210 aa		8.15	□□□□□ -1.1
PSMC6-208	ENST00000554956	TNNI2	P48788	182 aa		8.15	□□□□□ -1.1
PSMC6-208	ENST00000554956	ZNF165	P49910	485 aa		8.15	□□□□□ -1.1
PSMC6-208	ENST00000554956	PRKCQ	Q04759	706 aa		8.15	□□□□□ -1.1
PSMC6-208	ENST00000554956	RAD51AP2	Q09MP3	1159 aa		8.15	□□□□□ -1.1
PSMC6-208	ENST00000554956	C22orf34	Q6ZV56	151 aa		8.15	□□□□□ -1.1
PSMC6-208	ENST00000554956	TP53INP2	Q8IXH6	220 aa		8.15	□□□□□ -1.1
PSMC6-208	ENST00000554956	REXO1	Q8N1G1	1221 aa	Known RBP	8.15	□□□□□ -1.1
PSMC6-208	ENST00000554956	CYP7A1	P22680	504 aa		8.14	□□□□□ -1.11
PSMC6-208	ENST00000554956	MLEC	Q14165	292 aa		8.14	□□□□□ -1.11
PSMC6-208	ENST00000554956	NPM2	Q86SE8	214 aa	Known RBP	8.14	□□□□□ -1.11
PSMC6-208	ENST00000554956	STK11IP	Q8N1F8	1099 aa		8.14	□□□□□ -1.11
PSMC6-208	ENST00000554956	MISP3	Q96FF7	219 aa		8.14	□□□□□ -1.11
PSMC6-208	ENST00000554956	CCDC74B	Q96LY2	380 aa		8.14	□□□□□ -1.11
PSMC6-208	ENST00000554956		Q96M66	194 aa		8.14	□□□□□ -1.11
PSMC6-208	ENST00000554956	FBXL18	Q96ME1	805 aa		8.14	□□□□□ -1.11
PSMC6-208	ENST00000554956	HSPA12B	Q96MM6	686 aa		8.14	□□□□□ -1.11
PSMC6-208	ENST00000554956	ACBD3	Q9H3P7	528 aa		8.14	□□□□□ -1.11
PSMC6-208	ENST00000554956	VAV3	Q9UKW4	847 aa		8.14	□□□□□ -1.11
PSMC6-208	ENST00000554956	AKNA	Q7Z591	1439 aa		8.13	□□□□□ -1.11
PSMC6-208	ENST00000554956	ARID4B	Q4LE39	1312 aa	Predicted RBP	8.13	□□□□□ -1.11
PSMC6-208	ENST00000554956	PITPNM2	Q9BZ72	1349 aa		8.13	□□□□□ -1.11
PSMC6-208	ENST00000554956		H3BS24	57 aa		8.13	□□□□□ -1.11
PSMC6-208	ENST00000554956	UBOX5	O94941	541 aa		8.13	□□□□□ -1.11
PSMC6-208	ENST00000554956	RAG1	P15918	1043 aa		8.13	□□□□□ -1.11
PSMC6-208	ENST00000554956	CLCN7	P51798	805 aa		8.13	□□□□□ -1.11
PSMC6-208	ENST00000554956	TNK2	Q07912	1038 aa		8.13	□□□□□ -1.11
PSMC6-208	ENST00000554956	ATG4C	Q96DT6	458 aa		8.13	□□□□□ -1.11

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms