RNA–Protein interactions for RNA: ENST00000554567.1

KTN1-215, Transcript of kinectin 1, human

TSL 5

Gene KTN1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-215	ENST00000554567	HOXC6	P09630	235 aa		32.1	■■■□□ 2.73
KTN1-215	ENST00000554567	KIF1BP	Q96EK5	621 aa		32.1	■■■□□ 2.73
KTN1-215	ENST00000554567	MOV10L1	Q9BXT6	1211 aa	Known RBP	32.1	■■■□□ 2.73
KTN1-215	ENST00000554567	ATN1	P54259	1190 aa	Predicted RBP	32.09	■■■□□ 2.73
KTN1-215	ENST00000554567	GPR153	Q6NV75	609 aa		32.09	■■■□□ 2.73
KTN1-215	ENST00000554567	ARMT1	Q9H993	441 aa		32.09	■■■□□ 2.73
KTN1-215	ENST00000554567	TCRBV5S4A2T	A0A5A2	114 aa		32.08	■■■□□ 2.73
KTN1-215	ENST00000554567	DLL1	O00548	723 aa		32.08	■■■□□ 2.73
KTN1-215	ENST00000554567	MSC	O60682	206 aa		32.08	■■■□□ 2.73
KTN1-215	ENST00000554567	TRPV1	Q8NER1	839 aa		32.08	■■■□□ 2.73
KTN1-215	ENST00000554567	LPAR1	Q92633	364 aa		32.08	■■■□□ 2.73
KTN1-215	ENST00000554567	DYNLL2	Q96FJ2	89 aa		32.08	■■■□□ 2.73
KTN1-215	ENST00000554567	FRMPD3	Q5JV73	1810 aa		32.07	■■■□□ 2.73
KTN1-215	ENST00000554567	ADORA2A	P29274	412 aa		32.07	■■■□□ 2.72
KTN1-215	ENST00000554567	PLS1	Q14651	629 aa		32.07	■■■□□ 2.72
KTN1-215	ENST00000554567	SLFNL1	Q499Z3	407 aa		32.07	■■■□□ 2.72
KTN1-215	ENST00000554567	KIAA1755	Q5JYT7	1200 aa		32.07	■■■□□ 2.72
KTN1-215	ENST00000554567	SAMD1	Q6SPF0	538 aa	Predicted RBP	32.07	■■■□□ 2.72
KTN1-215	ENST00000554567	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	32.07	■■■□□ 2.72
KTN1-215	ENST00000554567	TMEM179	Q6ZVK1	233 aa		32.06	■■■□□ 2.72
KTN1-215	ENST00000554567	SPATC1L	Q9H0A9	340 aa		32.06	■■■□□ 2.72
KTN1-215	ENST00000554567	PRKAB2	O43741	272 aa		32.05	■■■□□ 2.72
KTN1-215	ENST00000554567	ERCC3	P19447	782 aa		32.05	■■■□□ 2.72
KTN1-215	ENST00000554567	CLEC10A	Q8IUN9	316 aa		32.05	■■■□□ 2.72
KTN1-215	ENST00000554567	SPICE1	Q8N0Z3	855 aa		32.05	■■■□□ 2.72
KTN1-215	ENST00000554567	BOLA2	Q9H3K6	86 aa		32.05	■■■□□ 2.72
KTN1-215	ENST00000554567	SWAP70	Q9UH65	585 aa		32.05	■■■□□ 2.72
KTN1-215	ENST00000554567	STRN	O43815	780 aa		32.04	■■■□□ 2.72
KTN1-215	ENST00000554567	HMMR	O75330	724 aa		32.04	■■■□□ 2.72
KTN1-215	ENST00000554567	ANO1	Q5XXA6	986 aa		32.04	■■■□□ 2.72
KTN1-215	ENST00000554567	RPAP2	Q8IXW5	612 aa	Predicted RBP	32.04	■■■□□ 2.72
KTN1-215	ENST00000554567	LBHD1	Q9BQE6	289 aa	Predicted RBP	32.04	■■■□□ 2.72
KTN1-215	ENST00000554567	DNM1L	O00429	736 aa		32.03	■■■□□ 2.72
KTN1-215	ENST00000554567	FLOT1	O75955	427 aa		32.03	■■■□□ 2.72
KTN1-215	ENST00000554567	MBD4	O95243	580 aa		32.03	■■■□□ 2.72
KTN1-215	ENST00000554567	MYCN	P04198	464 aa	Predicted RBP	32.03	■■■□□ 2.72
KTN1-215	ENST00000554567	MS4A1	P11836	297 aa		32.03	■■■□□ 2.72
KTN1-215	ENST00000554567	CYBA	P13498	195 aa		32.03	■■■□□ 2.72
KTN1-215	ENST00000554567	AKR1B1	P15121	316 aa		32.03	■■■□□ 2.72
KTN1-215	ENST00000554567	GJC2	Q5T442	439 aa	Predicted RBP	32.03	■■■□□ 2.72
KTN1-215	ENST00000554567	ARHGEF10L	Q9HCE6	1279 aa		32.03	■■■□□ 2.72
KTN1-215	ENST00000554567	PAG1	Q9NWQ8	432 aa		32.03	■■■□□ 2.72
KTN1-215	ENST00000554567	DSG3	P32926	999 aa		32.02	■■■□□ 2.72
KTN1-215	ENST00000554567	NCAPG2	Q86XI2	1143 aa		32.02	■■■□□ 2.72
KTN1-215	ENST00000554567	SIRT2	Q8IXJ6	389 aa		32.02	■■■□□ 2.72
KTN1-215	ENST00000554567	COG6	Q9Y2V7	657 aa		32.02	■■■□□ 2.72
KTN1-215	ENST00000554567	COBL	O75128	1261 aa		32.01	■■■□□ 2.71
KTN1-215	ENST00000554567	ICA1	Q05084	483 aa		32.01	■■■□□ 2.71
KTN1-215	ENST00000554567	OLFML2B	Q68BL8	750 aa		32.01	■■■□□ 2.71
KTN1-215	ENST00000554567	SIAH1	Q8IUQ4	282 aa		32.01	■■■□□ 2.71
KTN1-215	ENST00000554567	SHCBP1	Q8NEM2	672 aa		32.01	■■■□□ 2.71
KTN1-215	ENST00000554567	ATG4C	Q96DT6	458 aa		32.01	■■■□□ 2.71
KTN1-215	ENST00000554567	MTMR10	Q9NXD2	777 aa		32.01	■■■□□ 2.71
KTN1-215	ENST00000554567	CYP2D7	A0A087X1C5	515 aa		32	■■■□□ 2.71
KTN1-215	ENST00000554567	SMIM22	K7EJ46	135 aa		32	■■■□□ 2.71
KTN1-215	ENST00000554567	IGHA2	P01877	340 aa		32	■■■□□ 2.71
KTN1-215	ENST00000554567	ADD2	P35612	726 aa		32	■■■□□ 2.71
KTN1-215	ENST00000554567	MB21D1	Q8N884	522 aa		32	■■■□□ 2.71
KTN1-215	ENST00000554567	ATP8A2	Q9NTI2	1148 aa		32	■■■□□ 2.71
KTN1-215	ENST00000554567	PRKAG2	Q9UGJ0	569 aa		32	■■■□□ 2.71
KTN1-215	ENST00000554567	RAB11FIP3	O75154	756 aa		31.99	■■■□□ 2.71
KTN1-215	ENST00000554567	RTP1	P59025	263 aa		31.99	■■■□□ 2.71
KTN1-215	ENST00000554567	PRAMEF19	Q5SWL8	479 aa		31.99	■■■□□ 2.71
KTN1-215	ENST00000554567	ARRDC4	Q8NCT1	418 aa		31.99	■■■□□ 2.71
KTN1-215	ENST00000554567	SLC5A4	Q9NY91	659 aa		31.99	■■■□□ 2.71
KTN1-215	ENST00000554567	ATP11B	Q9Y2G3	1177 aa		31.99	■■■□□ 2.71
KTN1-215	ENST00000554567	TMX2	Q9Y320	296 aa		31.99	■■■□□ 2.71
KTN1-215	ENST00000554567	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	31.98	■■■□□ 2.71	3e-11	■□□□□ 11
KTN1-215	ENST00000554567	MROH8	Q9H579	483 aa		31.98	■■■□□ 2.71
KTN1-215	ENST00000554567	SH2D4A	Q9H788	454 aa		31.98	■■■□□ 2.71
KTN1-215	ENST00000554567	VCPKMT	Q9H867	229 aa		31.98	■■■□□ 2.71
KTN1-215	ENST00000554567	ZBTB40	Q9NUA8	1239 aa		31.98	■■■□□ 2.71
KTN1-215	ENST00000554567	DDX19B	Q9UMR2	479 aa		31.98	■■■□□ 2.71
KTN1-215	ENST00000554567	RLF	Q13129	1914 aa		31.98	■■■□□ 2.71
KTN1-215	ENST00000554567	ZBED9	Q6R2W3	1325 aa		31.98	■■■□□ 2.71
KTN1-215	ENST00000554567	MYH8	P13535	1937 aa		31.97	■■■□□ 2.71
KTN1-215	ENST00000554567	CHGB	P05060	677 aa		31.97	■■■□□ 2.71
KTN1-215	ENST00000554567	CDK8	P49336	464 aa		31.97	■■■□□ 2.71
KTN1-215	ENST00000554567	AMOTL1	Q8IY63	956 aa		31.97	■■■□□ 2.71
KTN1-215	ENST00000554567	STXBP5L	Q9Y2K9	1186 aa		31.97	■■■□□ 2.71
KTN1-215	ENST00000554567	BAZ2A	Q9UIF9	1905 aa	Known RBP	31.96	■■■□□ 2.71
KTN1-215	ENST00000554567	USP17L12	C9JPN9	530 aa		31.96	■■■□□ 2.71
KTN1-215	ENST00000554567	KBTBD13	C9JR72	458 aa		31.96	■■■□□ 2.71
KTN1-215	ENST00000554567	USP17L21	D6R901	530 aa		31.96	■■■□□ 2.71
KTN1-215	ENST00000554567	ATP5J	P18859	108 aa		31.96	■■■□□ 2.71
KTN1-215	ENST00000554567	C12orf60	Q5U649	245 aa		31.96	■■■□□ 2.71
KTN1-215	ENST00000554567	CCDC17	Q96LX7	622 aa		31.96	■■■□□ 2.71
KTN1-215	ENST00000554567	SEPT4	O43236	478 aa		31.95	■■■□□ 2.71
KTN1-215	ENST00000554567	DDRGK1	Q96HY6	314 aa		31.95	■■■□□ 2.71
KTN1-215	ENST00000554567	DNAH12	Q6ZR08	3092 aa		31.95	■■■□□ 2.7
KTN1-215	ENST00000554567	ZNF236	Q9UL36	1845 aa		31.94	■■■□□ 2.7
KTN1-215	ENST00000554567	RAD21	O60216	631 aa		31.94	■■■□□ 2.7
KTN1-215	ENST00000554567	FCER1A	P12319	257 aa		31.94	■■■□□ 2.7
KTN1-215	ENST00000554567	SLC39A5	Q6ZMH5	540 aa		31.94	■■■□□ 2.7
KTN1-215	ENST00000554567	HAUS7	Q99871	368 aa		31.94	■■■□□ 2.7
KTN1-215	ENST00000554567	SLC4A4	Q9Y6R1	1079 aa		31.94	■■■□□ 2.7
KTN1-215	ENST00000554567		A0A0G2JMZ2	1700 aa		31.94	■■■□□ 2.7
KTN1-215	ENST00000554567	WDR46	O15213	610 aa	Known RBP	31.93	■■■□□ 2.7
KTN1-215	ENST00000554567	EEF2	P13639	858 aa	Known RBP	31.93	■■■□□ 2.7
KTN1-215	ENST00000554567	TMEM132B	Q14DG7	1078 aa		31.93	■■■□□ 2.7

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