RNA–Protein interactions for RNA: ENST00000554423.1

IFT43-208, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-208ENST00000554423 CARS2Q9HA77 564 aaKnown RBP4.02□□□□□ -1.77
IFT43-208ENST00000554423 ATP13A1Q9HD20 1204 aa4.02□□□□□ -1.77
IFT43-208ENST00000554423 MBNL3Q9NUK0 354 aaKnown RBP4.02□□□□□ -1.77
IFT43-208ENST00000554423 FAM53CQ9NYF3 392 aa4.02□□□□□ -1.77
IFT43-208ENST00000554423 POLR3KQ9Y2Y1 108 aaPredicted RBP4.02□□□□□ -1.77
IFT43-208ENST00000554423 ST14Q9Y5Y6 855 aa4.02□□□□□ -1.77
IFT43-208ENST00000554423 SLC22A31A6NKX4 558 aa4.01□□□□□ -1.77
IFT43-208ENST00000554423 PRR33A8MZF0 331 aa4.01□□□□□ -1.77
IFT43-208ENST00000554423 CHURC1-FNTBB4DL54 471 aa4.01□□□□□ -1.77
IFT43-208ENST00000554423 RNASE1P07998 156 aaKnown RBP4.01□□□□□ -1.77
IFT43-208ENST00000554423 GDNFP39905 211 aa4.01□□□□□ -1.77
IFT43-208ENST00000554423 TNK2Q07912 1038 aa4.01□□□□□ -1.77
IFT43-208ENST00000554423 COL9A2Q14055 689 aaPredicted RBP4.01□□□□□ -1.77
IFT43-208ENST00000554423 KRTAP19-4Q3LI73 84 aa4.01□□□□□ -1.77
IFT43-208ENST00000554423 CREG2Q8IUH2 290 aa4.01□□□□□ -1.77
IFT43-208ENST00000554423 SLITRK4Q8IW52 837 aa4.01□□□□□ -1.77
IFT43-208ENST00000554423 FBXO27Q8NI29 283 aa4.01□□□□□ -1.77
IFT43-208ENST00000554423 TMEM40Q8WWA1 233 aa4.01□□□□□ -1.77
IFT43-208ENST00000554423 DHX38Q92620 1227 aaKnown RBP4.01□□□□□ -1.77
IFT43-208ENST00000554423 DHRS1Q96LJ7 313 aa4.01□□□□□ -1.77
IFT43-208ENST00000554423 KREMEN1Q96MU8 473 aa4.01□□□□□ -1.77
IFT43-208ENST00000554423 CRBNQ96SW2 442 aa4.01□□□□□ -1.77
IFT43-208ENST00000554423 KIF2CQ99661 725 aa4.01□□□□□ -1.77
IFT43-208ENST00000554423 SEMA3GQ9NS98 782 aa4.01□□□□□ -1.77
IFT43-208ENST00000554423 ADAMTS1Q9UHI8 967 aa4.01□□□□□ -1.77
IFT43-208ENST00000554423 SSU72P8A0A1W2PR75 194 aa4□□□□□ -1.77
IFT43-208ENST00000554423 TPP2P29144 1249 aaPredicted RBP4□□□□□ -1.77
IFT43-208ENST00000554423 CD96P40200 585 aa4□□□□□ -1.77
IFT43-208ENST00000554423 ARSHQ5FYA8 562 aa4□□□□□ -1.77
IFT43-208ENST00000554423 CDCP2Q5VXM1 449 aa4□□□□□ -1.77
IFT43-208ENST00000554423 GK5Q6ZS86 529 aa4□□□□□ -1.77
IFT43-208ENST00000554423 DTWD2Q8NBA8 298 aa4□□□□□ -1.77
IFT43-208ENST00000554423 LRRN4CLQ8ND94 238 aa4□□□□□ -1.77
IFT43-208ENST00000554423 FLAD1Q8NFF5 587 aa4□□□□□ -1.77
IFT43-208ENST00000554423 BAHD1Q8TBE0 780 aaPredicted RBP4□□□□□ -1.77
IFT43-208ENST00000554423 PPP1R13LQ8WUF5 828 aa4□□□□□ -1.77
IFT43-208ENST00000554423 ALPK1Q96QP1 1244 aa4□□□□□ -1.77
IFT43-208ENST00000554423 FERD3LQ96RJ6 166 aa4□□□□□ -1.77
IFT43-208ENST00000554423 UBP1Q9NZI7 540 aa4□□□□□ -1.77
IFT43-208ENST00000554423 JAG2Q9Y219 1238 aa4□□□□□ -1.77
IFT43-208ENST00000554423 U3KQE9 123 aa4□□□□□ -1.77
IFT43-208ENST00000554423 CNTNAP4Q9C0A0 1308 aa3.99□□□□□ -1.77
IFT43-208ENST00000554423 CLEC3AO75596 197 aa3.99□□□□□ -1.77
IFT43-208ENST00000554423 ENDOUP21128 410 aaKnown RBP3.99□□□□□ -1.77
IFT43-208ENST00000554423 LTKP29376 864 aa3.99□□□□□ -1.77
IFT43-208ENST00000554423 FANCCQ00597 558 aa3.99□□□□□ -1.77
IFT43-208ENST00000554423 KCNMB1Q16558 191 aa3.99□□□□□ -1.77
IFT43-208ENST00000554423 TMEM67Q5HYA8 995 aa3.99□□□□□ -1.77
IFT43-208ENST00000554423 INTS3Q68E01 1043 aaKnown RBP3.99□□□□□ -1.77
IFT43-208ENST00000554423 NLRC3Q7RTR2 1065 aa3.99□□□□□ -1.77
IFT43-208ENST00000554423 TSPYL5Q86VY4 417 aaPredicted RBP3.99□□□□□ -1.77
IFT43-208ENST00000554423 SPPL2CQ8IUH8 684 aa3.99□□□□□ -1.77
IFT43-208ENST00000554423 KSR1Q8IVT5 923 aa3.99□□□□□ -1.77
IFT43-208ENST00000554423 OXR1Q8N573 874 aa3.99□□□□□ -1.77
IFT43-208ENST00000554423 FAM168AQ92567 244 aa3.99□□□□□ -1.77
IFT43-208ENST00000554423 MRRFQ96E11 262 aaKnown RBP3.99□□□□□ -1.77
IFT43-208ENST00000554423 DUSP15Q9H1R2 295 aaPredicted RBP3.99□□□□□ -1.77
IFT43-208ENST00000554423 CNNM2Q9H8M5 875 aa3.99□□□□□ -1.77
IFT43-208ENST00000554423 DUSP13Q9UII6 198 aa3.99□□□□□ -1.77
IFT43-208ENST00000554423 DDX41Q9UJV9 622 aaKnown RBP3.99□□□□□ -1.77
IFT43-208ENST00000554423 FARP2O94887 1054 aaPredicted RBP3.98□□□□□ -1.77
IFT43-208ENST00000554423 CLCQ05315 142 aa3.98□□□□□ -1.77
IFT43-208ENST00000554423 DUSP4Q13115 394 aa3.98□□□□□ -1.77
IFT43-208ENST00000554423 FBXW10Q5XX13 1052 aa3.98□□□□□ -1.77
IFT43-208ENST00000554423 TTC6Q86TZ1 520 aa3.98□□□□□ -1.77
IFT43-208ENST00000554423 ZSWIM9Q86XI8 627 aa3.98□□□□□ -1.77
IFT43-208ENST00000554423 WFDC3Q8IUB2 231 aa3.98□□□□□ -1.77
IFT43-208ENST00000554423 ZNF655Q8N720 491 aaPredicted RBP3.98□□□□□ -1.77
IFT43-208ENST00000554423 ATG4CQ96DT6 458 aa3.98□□□□□ -1.77
IFT43-208ENST00000554423 KIRREL1Q96J84 757 aa3.98□□□□□ -1.77
IFT43-208ENST00000554423 EAF1Q96JC9 268 aaPredicted RBP3.98□□□□□ -1.77
IFT43-208ENST00000554423 Q96M66 194 aa3.98□□□□□ -1.77
IFT43-208ENST00000554423 TM9SF2Q99805 663 aa3.98□□□□□ -1.77
IFT43-208ENST00000554423 SLAMF8Q9P0V8 285 aa3.98□□□□□ -1.77
IFT43-208ENST00000554423 ADAMTS6Q9UKP5 1117 aa3.98□□□□□ -1.77
IFT43-208ENST00000554423 CTNND2Q9UQB3 1225 aa3.98□□□□□ -1.77
IFT43-208ENST00000554423 MEIS3P2A8K0S8 358 aa3.97□□□□□ -1.77
IFT43-208ENST00000554423 PAPLNO95428 1278 aa3.97□□□□□ -1.77
IFT43-208ENST00000554423 SRFP11831 508 aa3.97□□□□□ -1.77
IFT43-208ENST00000554423 NME1P15531 152 aaKnown RBP3.97□□□□□ -1.77
IFT43-208ENST00000554423 CRKP46108 304 aa3.97□□□□□ -1.77
IFT43-208ENST00000554423 PCBP3P57721 371 aaKnown RBP3.97□□□□□ -1.77
IFT43-208ENST00000554423 EGR3Q06889 387 aa3.97□□□□□ -1.77
IFT43-208ENST00000554423 NMIQ13287 307 aaPredicted RBP3.97□□□□□ -1.77
IFT43-208ENST00000554423 GAB4Q2WGN9 574 aa3.97□□□□□ -1.77
IFT43-208ENST00000554423 BBS9Q3SYG4 887 aa3.97□□□□□ -1.77
IFT43-208ENST00000554423 LDLRAD1Q5T700 205 aa3.97□□□□□ -1.77
IFT43-208ENST00000554423 OVOS1Q6IE37 1185 aa3.97□□□□□ -1.77
IFT43-208ENST00000554423 RNF111Q6ZNA4 994 aa3.97□□□□□ -1.77
IFT43-208ENST00000554423 VPS37DQ86XT2 251 aa3.97□□□□□ -1.77
IFT43-208ENST00000554423 DAGLBQ8NCG7 672 aa3.97□□□□□ -1.77
IFT43-208ENST00000554423 SYTL5Q8TDW5 730 aaPredicted RBP3.97□□□□□ -1.77
IFT43-208ENST00000554423 MYLIPQ8WY64 445 aa3.97□□□□□ -1.77
IFT43-208ENST00000554423 SLC38A3Q99624 504 aa3.97□□□□□ -1.77
IFT43-208ENST00000554423 PRDM7Q9NQW5 492 aa3.97□□□□□ -1.77
IFT43-208ENST00000554423 TMEM59LQ9UK28 342 aa3.97□□□□□ -1.77
IFT43-208ENST00000554423 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.97□□□□□ -1.77
IFT43-208ENST00000554423 SLC12A7Q9Y666 1083 aa3.97□□□□□ -1.77
IFT43-208ENST00000554423 LRRN2O75325 713 aa3.96□□□□□ -1.78
IFT43-208ENST00000554423 UBOX5O94941 541 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms