RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 PDCD7Q8N8D1 485 aaKnown RBP9.02□□□□□ -0.97
LINC00640-201ENST00000554409 SLC44A5Q8NCS7 719 aa9.02□□□□□ -0.97
LINC00640-201ENST00000554409 GTF3C2Q8WUA4 911 aaPredicted RBP9.02□□□□□ -0.97
LINC00640-201ENST00000554409 DYNLL2Q96FJ2 89 aa9.02□□□□□ -0.97
LINC00640-201ENST00000554409 CCDC17Q96LX7 622 aa9.02□□□□□ -0.97
LINC00640-201ENST00000554409 LNPKQ9C0E8 428 aa9.02□□□□□ -0.97
LINC00640-201ENST00000554409 OSBPL3Q9H4L5 887 aa9.02□□□□□ -0.97
LINC00640-201ENST00000554409 EPB41L4AQ9HCS5 686 aaPredicted RBP9.02□□□□□ -0.97
LINC00640-201ENST00000554409 MORF4L1Q9UBU8 362 aa9.02□□□□□ -0.97
LINC00640-201ENST00000554409 PLXNB2O15031 1838 aa9.02□□□□□ -0.97
LINC00640-201ENST00000554409 CYP2D7A0A087X1C5 515 aa9.01□□□□□ -0.97
LINC00640-201ENST00000554409 PATL2C9JE40 543 aaKnown RBP9.01□□□□□ -0.97
LINC00640-201ENST00000554409 SMIM22K7EJ46 135 aa9.01□□□□□ -0.97
LINC00640-201ENST00000554409 FMNL1O95466 1100 aaPredicted RBP9.01□□□□□ -0.97
LINC00640-201ENST00000554409 AKR1B1P15121 316 aa9.01□□□□□ -0.97
LINC00640-201ENST00000554409 SOX10P56693 466 aa9.01□□□□□ -0.97
LINC00640-201ENST00000554409 SLC9C1Q4G0N8 1177 aa9.01□□□□□ -0.97
LINC00640-201ENST00000554409 ACER1Q8TDN7 264 aa9.01□□□□□ -0.97
LINC00640-201ENST00000554409 ZNF333Q96JL9 665 aa9.01□□□□□ -0.97
LINC00640-201ENST00000554409 SEC62Q99442 399 aaKnown RBP9.01□□□□□ -0.97
LINC00640-201ENST00000554409 FEZ1Q99689 392 aa9.01□□□□□ -0.97
LINC00640-201ENST00000554409 RLFQ13129 1914 aa9.01□□□□□ -0.97
LINC00640-201ENST00000554409 MYPNQ86TC9 1320 aa9.01□□□□□ -0.97
LINC00640-201ENST00000554409 A0A1W2PRG0 241 aa9□□□□□ -0.97
LINC00640-201ENST00000554409 USP17L15C9J2P7 530 aa9□□□□□ -0.97
LINC00640-201ENST00000554409 USP17L13C9JLJ4 530 aa9□□□□□ -0.97
LINC00640-201ENST00000554409 USP17L11C9JVI0 530 aa9□□□□□ -0.97
LINC00640-201ENST00000554409 USP17L18D6R9N7 530 aa9□□□□□ -0.97
LINC00640-201ENST00000554409 USP17L22D6RA61 530 aa9□□□□□ -0.97
LINC00640-201ENST00000554409 USP17L17D6RBQ6 530 aa9□□□□□ -0.97
LINC00640-201ENST00000554409 USP17L19D6RCP7 530 aa9□□□□□ -0.97
LINC00640-201ENST00000554409 USP17L20D6RJB6 530 aa9□□□□□ -0.97
LINC00640-201ENST00000554409 MPHOSPH10O00566 681 aaKnown RBP9□□□□□ -0.97
LINC00640-201ENST00000554409 TNPO2O14787 897 aaKnown RBP9□□□□□ -0.97
LINC00640-201ENST00000554409 VCAM1P19320 739 aa9□□□□□ -0.97
LINC00640-201ENST00000554409 HERVK_113P62684 666 aa9□□□□□ -0.97
LINC00640-201ENST00000554409 MLLT1Q03111 559 aaPredicted RBP9□□□□□ -0.97
LINC00640-201ENST00000554409 USP17L24Q0WX57 530 aa9□□□□□ -0.97
LINC00640-201ENST00000554409 ZYXQ15942 572 aaKnown RBP9□□□□□ -0.97
LINC00640-201ENST00000554409 B4GALNT3Q6L9W6 998 aa9□□□□□ -0.97
LINC00640-201ENST00000554409 LBX2Q6XYB7 198 aa9□□□□□ -0.97
LINC00640-201ENST00000554409 CATSPERGQ6ZRH7 1159 aa9□□□□□ -0.97
LINC00640-201ENST00000554409 NBPF11Q86T75 865 aa9□□□□□ -0.97
LINC00640-201ENST00000554409 PLEKHM2Q8IWE5 1019 aa9□□□□□ -0.97
LINC00640-201ENST00000554409 IFNL3Q8IZI9 196 aa9□□□□□ -0.97
LINC00640-201ENST00000554409 P2RX7Q99572 595 aaKnown RBP9□□□□□ -0.97
LINC00640-201ENST00000554409 NACAP1Q9BZK3 213 aa9□□□□□ -0.97
LINC00640-201ENST00000554409 HELLSQ9NRZ9 838 aa9□□□□□ -0.97
LINC00640-201ENST00000554409 MYH4Q9Y623 1939 aa8.99□□□□□ -0.97
LINC00640-201ENST00000554409 DOCK3Q8IZD9 2030 aa8.99□□□□□ -0.97
LINC00640-201ENST00000554409 RASA1P20936 1047 aa8.99□□□□□ -0.97
LINC00640-201ENST00000554409 TDO2P48775 406 aa8.99□□□□□ -0.97
LINC00640-201ENST00000554409 ICA1Q05084 483 aa8.99□□□□□ -0.97
LINC00640-201ENST00000554409 PRKCZQ05513 592 aa8.99□□□□□ -0.97
LINC00640-201ENST00000554409 IRF5Q13568 498 aa8.99□□□□□ -0.97
LINC00640-201ENST00000554409 SIAH1Q8IUQ4 282 aa8.99□□□□□ -0.97
LINC00640-201ENST00000554409 SLAIN1Q8ND83 568 aa8.99□□□□□ -0.97
LINC00640-201ENST00000554409 RAET1EQ8TD07 263 aa8.99□□□□□ -0.97
LINC00640-201ENST00000554409 LPAR1Q92633 364 aa8.99□□□□□ -0.97
LINC00640-201ENST00000554409 COA7Q96BR5 231 aa8.99□□□□□ -0.97
LINC00640-201ENST00000554409 SH2D4AQ9H788 454 aa8.99□□□□□ -0.97
LINC00640-201ENST00000554409 KANSL2Q9H9L4 492 aa8.99□□□□□ -0.97
LINC00640-201ENST00000554409 ZNF287Q9HBT7 754 aa8.99□□□□□ -0.97
LINC00640-201ENST00000554409 ARHGEF10LQ9HCE6 1279 aa8.99□□□□□ -0.97
LINC00640-201ENST00000554409 RBPJLQ9UBG7 517 aa8.99□□□□□ -0.97
LINC00640-201ENST00000554409 GABRQQ9UN88 632 aa8.99□□□□□ -0.97
LINC00640-201ENST00000554409 TMX2Q9Y320 296 aa8.99□□□□□ -0.97
LINC00640-201ENST00000554409 PLIN4Q96Q06 1357 aa8.99□□□□□ -0.97
LINC00640-201ENST00000554409 LAMA4Q16363 1823 aa8.98□□□□□ -0.97
LINC00640-201ENST00000554409 ZNF236Q9UL36 1845 aa8.98□□□□□ -0.97
LINC00640-201ENST00000554409 FOXP2O15409 715 aa8.98□□□□□ -0.97
LINC00640-201ENST00000554409 APPP05067 770 aa8.98□□□□□ -0.97
LINC00640-201ENST00000554409 GRK4P32298 578 aa8.98□□□□□ -0.97
LINC00640-201ENST00000554409 FLT3LGP49771 235 aa8.98□□□□□ -0.97
LINC00640-201ENST00000554409 POTEEQ6S8J3 1075 aa8.98□□□□□ -0.97
LINC00640-201ENST00000554409 GPRC5AQ8NFJ5 357 aa8.98□□□□□ -0.97
LINC00640-201ENST00000554409 PXYLP1Q8TE99 480 aa8.98□□□□□ -0.97
LINC00640-201ENST00000554409 NAPBQ9H115 298 aa8.98□□□□□ -0.97
LINC00640-201ENST00000554409 RPAP3Q9H6T3 665 aaPredicted RBP8.98□□□□□ -0.97
LINC00640-201ENST00000554409 VCPKMTQ9H867 229 aa8.98□□□□□ -0.97
LINC00640-201ENST00000554409 TXNRD2Q9NNW7 524 aa8.98□□□□□ -0.97
LINC00640-201ENST00000554409 RABGAP1Q9Y3P9 1069 aa8.98□□□□□ -0.97
LINC00640-201ENST00000554409 ZMYM6O95789 1325 aa8.98□□□□□ -0.97
LINC00640-201ENST00000554409 COL11A1P12107 1806 aaPredicted RBP8.98□□□□□ -0.97
LINC00640-201ENST00000554409 HTTP42858 3142 aa8.98□□□□□ -0.97
LINC00640-201ENST00000554409 IGKV6D-41A0A0C4DH26 115 aa8.97□□□□□ -0.97
LINC00640-201ENST00000554409 A0A0D9SFI3 127 aa8.97□□□□□ -0.97
LINC00640-201ENST00000554409 SPDYE16A6NNV3 312 aaPredicted RBP8.97□□□□□ -0.97
LINC00640-201ENST00000554409 MINDY4BA8MYZ0 360 aa8.97□□□□□ -0.97
LINC00640-201ENST00000554409 WDR46O15213 610 aaKnown RBP8.97□□□□□ -0.97
LINC00640-201ENST00000554409 ADCY3O60266 1144 aa8.97□□□□□ -0.97
LINC00640-201ENST00000554409 CNMDO75829 334 aa8.97□□□□□ -0.97
LINC00640-201ENST00000554409 SLC3A2P08195 630 aaKnown RBP8.97□□□□□ -0.97
LINC00640-201ENST00000554409 EEF2P13639 858 aaKnown RBP8.97□□□□□ -0.97
LINC00640-201ENST00000554409 MAPK4P31152 587 aa8.97□□□□□ -0.97
LINC00640-201ENST00000554409 ERVK-9P63128 1117 aa8.97□□□□□ -0.97
LINC00640-201ENST00000554409 ERVK-24P63145 666 aa8.97□□□□□ -0.97
LINC00640-201ENST00000554409 PPARAQ07869 468 aa8.97□□□□□ -0.97
LINC00640-201ENST00000554409 ALX1Q15699 326 aa8.97□□□□□ -0.97
LINC00640-201ENST00000554409 MCMDC2Q4G0Z9 681 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms