RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 MEGF10Q96KG7 1140 aa7.19□□□□□ -1.26
MTHFD1-206ENST00000554353 FBRSQ9HAH7 460 aa7.19□□□□□ -1.26
MTHFD1-206ENST00000554353 LGR6Q9HBX8 967 aa7.19□□□□□ -1.26
MTHFD1-206ENST00000554353 ADAM30Q9UKF2 790 aa7.19□□□□□ -1.26
MTHFD1-206ENST00000554353 R3HCC1Q9Y3T6 440 aaKnown RBP7.19□□□□□ -1.26
MTHFD1-206ENST00000554353 KDM5CP41229 1560 aa7.19□□□□□ -1.26
MTHFD1-206ENST00000554353 PREX2Q70Z35 1606 aa7.19□□□□□ -1.26
MTHFD1-206ENST00000554353 CASKIN1Q8WXD9 1431 aa7.18□□□□□ -1.26
MTHFD1-206ENST00000554353 SLC22A31A6NKX4 558 aa7.18□□□□□ -1.26
MTHFD1-206ENST00000554353 UPK3BL1B0FP48 263 aa7.18□□□□□ -1.26
MTHFD1-206ENST00000554353 CHURC1-FNTBB4DL54 471 aa7.18□□□□□ -1.26
MTHFD1-206ENST00000554353 UPK3BL2E5RIL1 263 aa7.18□□□□□ -1.26
MTHFD1-206ENST00000554353 SMAD7O15105 426 aaKnown RBP7.18□□□□□ -1.26
MTHFD1-206ENST00000554353 DNAJA2O60884 412 aa7.18□□□□□ -1.26
MTHFD1-206ENST00000554353 CHRNA4P43681 627 aa7.18□□□□□ -1.26
MTHFD1-206ENST00000554353 SGO2Q562F6 1265 aa7.18□□□□□ -1.26
MTHFD1-206ENST00000554353 OVOS1Q6IE37 1185 aa7.18□□□□□ -1.26
MTHFD1-206ENST00000554353 CDPF1Q6NVV7 123 aa7.18□□□□□ -1.26
MTHFD1-206ENST00000554353 RUFY4Q6ZNE9 571 aa7.18□□□□□ -1.26
MTHFD1-206ENST00000554353 ANKS3Q6ZW76 656 aa7.18□□□□□ -1.26
MTHFD1-206ENST00000554353 FAM169BQ8N8A8 192 aa7.18□□□□□ -1.26
MTHFD1-206ENST00000554353 TMEM40Q8WWA1 233 aa7.18□□□□□ -1.26
MTHFD1-206ENST00000554353 FAM46AQ96IP4 442 aaKnown RBP7.18□□□□□ -1.26
MTHFD1-206ENST00000554353 DPH2Q9BQC3 489 aaPredicted RBP7.18□□□□□ -1.26
MTHFD1-206ENST00000554353 GSX1Q9H4S2 264 aaPredicted RBP7.18□□□□□ -1.26
MTHFD1-206ENST00000554353 GMIPQ9P107 970 aa7.18□□□□□ -1.26
MTHFD1-206ENST00000554353 TJP2Q9UDY2 1190 aa7.18□□□□□ -1.26
MTHFD1-206ENST00000554353 DAGLAQ9Y4D2 1042 aa7.18□□□□□ -1.26
MTHFD1-206ENST00000554353 ITSN2Q9NZM3 1697 aa7.18□□□□□ -1.26
MTHFD1-206ENST00000554353 CCDC18Q5T9S5 1454 aa7.17□□□□□ -1.26
MTHFD1-206ENST00000554353 DIP2CQ9Y2E4 1556 aa7.17□□□□□ -1.26
MTHFD1-206ENST00000554353 ABCA6Q8N139 1617 aa7.17□□□□□ -1.26
MTHFD1-206ENST00000554353 C3P01024 1663 aa7.17□□□□□ -1.26
MTHFD1-206ENST00000554353 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.17□□□□□ -1.26
MTHFD1-206ENST00000554353 NFICP08651 508 aa7.17□□□□□ -1.26
MTHFD1-206ENST00000554353 BMP3P12645 472 aa7.17□□□□□ -1.26
MTHFD1-206ENST00000554353 YARSP54577 528 aaKnown RBP7.17□□□□□ -1.26
MTHFD1-206ENST00000554353 PPP2R5EQ16537 467 aa7.17□□□□□ -1.26
MTHFD1-206ENST00000554353 NKG7Q16617 165 aa7.17□□□□□ -1.26
MTHFD1-206ENST00000554353 ARSHQ5FYA8 562 aa7.17□□□□□ -1.26
MTHFD1-206ENST00000554353 TMEM201Q5SNT2 666 aa7.17□□□□□ -1.26
MTHFD1-206ENST00000554353 CD163Q86VB7 1156 aa7.17□□□□□ -1.26
MTHFD1-206ENST00000554353 MCATQ8IVS2 390 aaKnown RBP7.17□□□□□ -1.26
MTHFD1-206ENST00000554353 KCT2Q8NC54 265 aa7.17□□□□□ -1.26
MTHFD1-206ENST00000554353 RBBP8NLQ8NC74 664 aaPredicted RBP7.17□□□□□ -1.26
MTHFD1-206ENST00000554353 OR6P1Q8NGX9 317 aa7.17□□□□□ -1.26
MTHFD1-206ENST00000554353 TMEM87BQ96K49 555 aa7.17□□□□□ -1.26
MTHFD1-206ENST00000554353 YIPF2Q9BWQ6 316 aa7.17□□□□□ -1.26
MTHFD1-206ENST00000554353 KCNF1Q9H3M0 494 aa7.17□□□□□ -1.26
MTHFD1-206ENST00000554353 PRKAG3Q9UGI9 489 aa7.17□□□□□ -1.26
MTHFD1-206ENST00000554353 PCOLCE2Q9UKZ9 415 aa7.17□□□□□ -1.26
MTHFD1-206ENST00000554353 KIDINS220Q9ULH0 1771 aa7.17□□□□□ -1.26
MTHFD1-206ENST00000554353 STRCQ7RTU9 1775 aa7.16□□□□□ -1.26
MTHFD1-206ENST00000554353 FAM86C2PA6NEL3 165 aa7.16□□□□□ -1.26
MTHFD1-206ENST00000554353 C1QTNF9BB2RNN3 333 aa7.16□□□□□ -1.26
MTHFD1-206ENST00000554353 MSTNO14793 375 aa7.16□□□□□ -1.26
MTHFD1-206ENST00000554353 RBL2Q08999 1139 aa7.16□□□□□ -1.26
MTHFD1-206ENST00000554353 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.16□□□□□ -1.26
MTHFD1-206ENST00000554353 NLRC3Q7RTR2 1065 aa7.16□□□□□ -1.26
MTHFD1-206ENST00000554353 DZIP1LQ8IYY4 767 aaKnown RBP7.16□□□□□ -1.26
MTHFD1-206ENST00000554353 XAGE3Q8WTP9 111 aa7.16□□□□□ -1.26
MTHFD1-206ENST00000554353 HNRNPLLQ8WVV9 542 aaKnown RBP7.16□□□□□ -1.26
MTHFD1-206ENST00000554353 ATG4CQ96DT6 458 aa7.16□□□□□ -1.26
MTHFD1-206ENST00000554353 TRIM55Q9BYV6 548 aa7.16□□□□□ -1.26
MTHFD1-206ENST00000554353 ACSS3Q9H6R3 686 aa7.16□□□□□ -1.26
MTHFD1-206ENST00000554353 DHX57Q6P158 1386 aaKnown RBP7.16□□□□□ -1.26
MTHFD1-206ENST00000554353 TRAPPC8Q9Y2L5 1435 aa7.16□□□□□ -1.26
MTHFD1-206ENST00000554353 LRRC9Q6ZRR7 1453 aa7.16□□□□□ -1.26
MTHFD1-206ENST00000554353 MLH3Q9UHC1 1453 aa7.16□□□□□ -1.26
MTHFD1-206ENST00000554353 ABCC1P33527 1531 aa7.16□□□□□ -1.26
MTHFD1-206ENST00000554353 REREQ9P2R6 1566 aa7.16□□□□□ -1.26
MTHFD1-206ENST00000554353 MEIS3P2A8K0S8 358 aa7.15□□□□□ -1.26
MTHFD1-206ENST00000554353 RAG1P15918 1043 aa7.15□□□□□ -1.26
MTHFD1-206ENST00000554353 SLBPQ14493 270 aaKnown RBP eCLIP7.15□□□□□ -1.26
MTHFD1-206ENST00000554353 UVSSAQ2YD98 709 aa7.15□□□□□ -1.26
MTHFD1-206ENST00000554353 TNNI3KQ59H18 835 aa7.15□□□□□ -1.26
MTHFD1-206ENST00000554353 SOGA3Q5TF21 947 aa7.15□□□□□ -1.26
MTHFD1-206ENST00000554353 PRAMEF13Q5VWM6 474 aa7.15□□□□□ -1.26
MTHFD1-206ENST00000554353 SLC6A19Q695T7 634 aa7.15□□□□□ -1.26
MTHFD1-206ENST00000554353 MRPL41Q8IXM3 137 aaKnown RBP7.15□□□□□ -1.26
MTHFD1-206ENST00000554353 PHACTR4Q8IZ21 702 aa7.15□□□□□ -1.26
MTHFD1-206ENST00000554353 ARMC10Q8N2F6 343 aa7.15□□□□□ -1.26
MTHFD1-206ENST00000554353 MYRFLQ96LU7 910 aa7.15□□□□□ -1.26
MTHFD1-206ENST00000554353 SEMA6CQ9H3T2 930 aa7.15□□□□□ -1.26
MTHFD1-206ENST00000554353 ACTR10Q9NZ32 417 aa7.15□□□□□ -1.26
MTHFD1-206ENST00000554353 CCNB3Q8WWL7 1395 aa7.15□□□□□ -1.26
MTHFD1-206ENST00000554353 PROCP04070 461 aa7.14□□□□□ -1.27
MTHFD1-206ENST00000554353 NME1P15531 152 aaKnown RBP7.14□□□□□ -1.27
MTHFD1-206ENST00000554353 GUCY2CP25092 1073 aa7.14□□□□□ -1.27
MTHFD1-206ENST00000554353 MAP4P27816 1152 aaKnown RBP7.14□□□□□ -1.27
MTHFD1-206ENST00000554353 NFKBIBQ15653 356 aa7.14□□□□□ -1.27
MTHFD1-206ENST00000554353 LARP1BQ659C4 914 aaKnown RBP7.14□□□□□ -1.27
MTHFD1-206ENST00000554353 SUPT6HQ7KZ85 1726 aaKnown RBP7.14□□□□□ -1.27
MTHFD1-206ENST00000554353 ARMCX6Q7L4S7 300 aa7.14□□□□□ -1.27
MTHFD1-206ENST00000554353 DPH6Q7L8W6 267 aa7.14□□□□□ -1.27
MTHFD1-206ENST00000554353 FAM20CQ8IXL6 584 aa7.14□□□□□ -1.27
MTHFD1-206ENST00000554353 DHX37Q8IY37 1157 aaKnown RBP7.14□□□□□ -1.27
MTHFD1-206ENST00000554353 TM9SF2Q99805 663 aa7.14□□□□□ -1.27
MTHFD1-206ENST00000554353 FYCO1Q9BQS8 1478 aa7.14□□□□□ -1.27
MTHFD1-206ENST00000554353 FOXQ1Q9C009 403 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms