RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 KCNH4Q9UQ05 1017 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 MARF1Q9Y4F3 1742 aaKnown RBP2.96□□□□□ -1.94
PRPF39-205ENST00000554081 PCDHB15Q9Y5E8 787 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 LTBP3Q9NS15 1303 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 MED23Q9ULK4 1368 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 TAF1P21675 1872 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 KLRG2A4D1S0 409 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-205ENST00000554081 ZNF213O14771 459 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 ZBTB7BO15156 539 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-205ENST00000554081 FARP2O94887 1054 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-205ENST00000554081 SLC10A3P09131 477 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 AKR1B1P15121 316 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 ZNF76P36508 570 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 IGBP1P78318 339 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 TRIM32Q13049 653 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 GNASQ5JWF2 1037 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 SNRNP48Q6IEG0 339 aaKnown RBP2.95□□□□□ -1.94
PRPF39-205ENST00000554081 CASC1Q6TDU7 716 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 SEPT14Q6ZU15 432 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 DEFB128Q7Z7B8 93 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 PLCD3Q8N3E9 789 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 GPRC5AQ8NFJ5 357 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 NOC3LQ8WTT2 800 aaKnown RBP2.95□□□□□ -1.94
PRPF39-205ENST00000554081 NSUN4Q96CB9 384 aaKnown RBP2.95□□□□□ -1.94
PRPF39-205ENST00000554081 ATG4CQ96DT6 458 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 PTPN18Q99952 460 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 OSBPL5Q9H0X9 879 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-205ENST00000554081 UNC93B1Q9H1C4 597 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 ASCC2Q9H1I8 757 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-205ENST00000554081 HMX1Q9NP08 348 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-205ENST00000554081 COPRSQ9NQ92 184 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 FAM198AQ9UFP1 575 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 SAMM50Q9Y512 469 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 ZC3H4Q9UPT8 1303 aaKnown RBP2.95□□□□□ -1.94
PRPF39-205ENST00000554081 MON2Q7Z3U7 1717 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 B4E1Z4 1266 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 DDX39AO00148 427 aaKnown RBP2.95□□□□□ -1.94
PRPF39-205ENST00000554081 IFIT3O14879 490 aaKnown RBP2.95□□□□□ -1.94
PRPF39-205ENST00000554081 SEMA3EO15041 775 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 DYNC1LI2O43237 492 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-205ENST00000554081 INHAP05111 366 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 EEF2P13639 858 aaKnown RBP2.95□□□□□ -1.94
PRPF39-205ENST00000554081 RAG1P15918 1043 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 PTPRAP18433 802 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 SP100P23497 879 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-205ENST00000554081 AAMPQ13685 434 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 CCL14Q16627 93 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 VARS2Q5ST30 1063 aaKnown RBP2.95□□□□□ -1.94
PRPF39-205ENST00000554081 MFSD6Q6ZSS7 791 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 RASGRP2Q7LDG7 609 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 ADGRA1Q86SQ6 560 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 MICU3Q86XE3 530 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 IQCA1Q86XH1 822 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 CKAP2LQ8IYA6 745 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 SCYL3Q8IZE3 742 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 SLC17A8Q8NDX2 589 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 ZNF668Q96K58 619 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-205ENST00000554081 ZDHHC15Q96MV8 337 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 NBPF3Q9H094 633 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 PORCNQ9H237 461 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 RTEL1Q9NZ71 1219 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 MRC1P22897 1456 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 MROH7-TTC4A0A0A0MT08 1334 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 ZBED9Q6R2W3 1325 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 COL18A1P39060 1754 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 ABCA3Q99758 1704 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 TESPA1A2RU30 521 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-205ENST00000554081 CPLX1O14810 134 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 TLR2O60603 784 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 ZBED4O75132 1171 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 IL1R1P14778 569 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 ERCC3P19447 782 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 GJA5P36382 358 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 CCL23P55773 120 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 INHBEP58166 350 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 HERVK_113P62684 666 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 LONRF3Q496Y0 759 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 MFSD14CQ5VZR4 134 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 SLFN13Q68D06 897 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 INTS3Q68E01 1043 aaKnown RBP2.95□□□□□ -1.94
PRPF39-205ENST00000554081 FBXO46Q6PJ61 603 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-205ENST00000554081 USP17L2Q6R6M4 530 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 FAM177A1Q8N128 213 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-205ENST00000554081 ZNF710Q8N1W2 664 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 U2AF1L4Q8WU68 220 aaKnown RBP2.95□□□□□ -1.94
PRPF39-205ENST00000554081 ZNF592Q92610 1267 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 ALG1Q9BT22 464 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 RTFDC1Q9BY42 306 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-205ENST00000554081 KAT14Q9H8E8 782 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 ZNF287Q9HBT7 754 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 PCDHB13Q9Y5F0 798 aa2.95□□□□□ -1.94
PRPF39-205ENST00000554081 POLR2AP24928 1970 aaKnown RBP2.95□□□□□ -1.94
PRPF39-205ENST00000554081 KIF20BQ96Q89 1820 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 CACNA1HO95180 2353 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 CCL5P13501 91 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 PTGS1P23219 599 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 CAP2P40123 477 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 STAT3P40763 770 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 CDK8P49336 464 aa2.94□□□□□ -1.94
PRPF39-205ENST00000554081 CDR1P51861 262 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms