RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 SUZ12Q15022 739 aaKnown RBP8.84□□□□□ -0.99
ATXN3-224ENST00000554040 C4orf17Q53FE4 359 aa8.84□□□□□ -0.99
ATXN3-224ENST00000554040 CERS5Q8N5B7 392 aa8.84□□□□□ -0.99
ATXN3-224ENST00000554040 DEFB123Q8N688 67 aa8.84□□□□□ -0.99
ATXN3-224ENST00000554040 TTLL11Q8NHH1 800 aa8.84□□□□□ -0.99
ATXN3-224ENST00000554040 ZSCAN10Q96SZ4 725 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-224ENST00000554040 RNF208Q9H0X6 261 aa8.84□□□□□ -0.99
ATXN3-224ENST00000554040 CD209Q9NNX6 404 aa8.84□□□□□ -0.99
ATXN3-224ENST00000554040 ZCCHC17Q9NP64 241 aaKnown RBP8.84□□□□□ -0.99
ATXN3-224ENST00000554040 CWC25Q9NXE8 425 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-224ENST00000554040 SRRDQ9UH36 339 aa8.84□□□□□ -0.99
ATXN3-224ENST00000554040 DNMT3AQ9Y6K1 912 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-224ENST00000554040 PSME4Q14997 1843 aa8.84□□□□□ -0.99
ATXN3-224ENST00000554040 SPTBN5Q9NRC6 3674 aaKnown RBP8.83□□□□□ -1
ATXN3-224ENST00000554040 BTBD19C9JJ37 291 aa8.83□□□□□ -1
ATXN3-224ENST00000554040 FARP2O94887 1054 aaPredicted RBP8.83□□□□□ -1
ATXN3-224ENST00000554040 BCRP11274 1271 aa8.83□□□□□ -1
ATXN3-224ENST00000554040 CTGFP29279 349 aa8.83□□□□□ -1
ATXN3-224ENST00000554040 BMP8BP34820 402 aa8.83□□□□□ -1
ATXN3-224ENST00000554040 TMPOP42166 694 aaKnown RBP8.83□□□□□ -1
ATXN3-224ENST00000554040 PSMC4P43686 418 aa8.83□□□□□ -1
ATXN3-224ENST00000554040 CTSWP56202 376 aa8.83□□□□□ -1
ATXN3-224ENST00000554040 UBXN2AP68543 259 aa8.83□□□□□ -1
ATXN3-224ENST00000554040 VAC14Q08AM6 782 aa8.83□□□□□ -1
ATXN3-224ENST00000554040 KANK3Q6NY19 840 aa8.83□□□□□ -1
ATXN3-224ENST00000554040 C17orf99Q6UX52 265 aa8.83□□□□□ -1
ATXN3-224ENST00000554040 RAET1EQ8TD07 263 aa8.83□□□□□ -1
ATXN3-224ENST00000554040 SCARF2Q96GP6 870 aaPredicted RBP8.83□□□□□ -1
ATXN3-224ENST00000554040 ANKRD2Q9GZV1 360 aa8.83□□□□□ -1
ATXN3-224ENST00000554040 GREM2Q9H772 168 aa8.83□□□□□ -1
ATXN3-224ENST00000554040 GDPD2Q9HCC8 539 aa8.83□□□□□ -1
ATXN3-224ENST00000554040 GPAMQ9HCL2 828 aa8.83□□□□□ -1
ATXN3-224ENST00000554040 DOLKQ9UPQ8 538 aa8.83□□□□□ -1
ATXN3-224ENST00000554040 RIPOR2Q9Y4F9 1068 aa8.83□□□□□ -1
ATXN3-224ENST00000554040 LAS1LQ9Y4W2 734 aaKnown RBP8.83□□□□□ -1
ATXN3-224ENST00000554040 TTC28Q96AY4 2481 aa8.82□□□□□ -1
ATXN3-224ENST00000554040 AOX1Q06278 1338 aa8.82□□□□□ -1
ATXN3-224ENST00000554040 F8W031 263 aaPredicted RBP8.82□□□□□ -1
ATXN3-224ENST00000554040 SGPL1O95470 568 aa8.82□□□□□ -1
ATXN3-224ENST00000554040 CETPP11597 493 aa8.82□□□□□ -1
ATXN3-224ENST00000554040 CAPN2P17655 700 aa8.82□□□□□ -1
ATXN3-224ENST00000554040 MX2P20592 715 aa8.82□□□□□ -1
ATXN3-224ENST00000554040 IGHMBP2P38935 993 aaKnown RBP8.82□□□□□ -1
ATXN3-224ENST00000554040 FKBP1AP62942 108 aaKnown RBP8.82□□□□□ -1
ATXN3-224ENST00000554040 TNFAIP1Q13829 316 aa8.82□□□□□ -1
ATXN3-224ENST00000554040 VGLL4Q14135 290 aa8.82□□□□□ -1
ATXN3-224ENST00000554040 Q7L0L9 218 aa8.82□□□□□ -1
ATXN3-224ENST00000554040 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.82□□□□□ -1
ATXN3-224ENST00000554040 U2AF1L4Q8WU68 220 aaKnown RBP8.82□□□□□ -1
ATXN3-224ENST00000554040 TEPSINQ96N21 525 aa8.82□□□□□ -1
ATXN3-224ENST00000554040 TRERF1Q96PN7 1200 aa8.82□□□□□ -1
ATXN3-224ENST00000554040 METTL22Q9BUU2 404 aaPredicted RBP8.82□□□□□ -1
ATXN3-224ENST00000554040 PHAXQ9H814 394 aaKnown RBP8.82□□□□□ -1
ATXN3-224ENST00000554040 MTMR10Q9NXD2 777 aa8.82□□□□□ -1
ATXN3-224ENST00000554040 BIN2Q9UBW5 565 aaPredicted RBP8.82□□□□□ -1
ATXN3-224ENST00000554040 CSADQ9Y600 493 aa8.82□□□□□ -1
ATXN3-224ENST00000554040 CNTNAP5Q8WYK1 1306 aa8.81□□□□□ -1
ATXN3-224ENST00000554040 A0A1B0GTH6 734 aa8.81□□□□□ -1
ATXN3-224ENST00000554040 RBM5P52756 815 aaKnown RBP eCLIP8.81□□□□□ -1
ATXN3-224ENST00000554040 SNAPC2Q13487 334 aa8.81□□□□□ -1
ATXN3-224ENST00000554040 LRIT3Q3SXY7 679 aa8.81□□□□□ -1
ATXN3-224ENST00000554040 DUSP27Q5VZP5 1158 aa8.81□□□□□ -1
ATXN3-224ENST00000554040 RNF135Q8IUD6 432 aa8.81□□□□□ -1
ATXN3-224ENST00000554040 GDF15Q99988 308 aa8.81□□□□□ -1
ATXN3-224ENST00000554040 ZNF70Q9UC06 446 aaPredicted RBP8.81□□□□□ -1
ATXN3-224ENST00000554040 DLG5Q8TDM6 1919 aa8.81□□□□□ -1
ATXN3-224ENST00000554040 IL1R1P14778 569 aa8.8□□□□□ -1
ATXN3-224ENST00000554040 KCNJ4P48050 445 aa8.8□□□□□ -1
ATXN3-224ENST00000554040 USP4Q13107 963 aa8.8□□□□□ -1
ATXN3-224ENST00000554040 SLFNL1Q499Z3 407 aa8.8□□□□□ -1
ATXN3-224ENST00000554040 C15orf52Q6ZUT6 534 aaKnown RBP8.8□□□□□ -1
ATXN3-224ENST00000554040 ERO1BQ86YB8 467 aa8.8□□□□□ -1
ATXN3-224ENST00000554040 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.8□□□□□ -1
ATXN3-224ENST00000554040 CPA4Q9UI42 421 aa8.8□□□□□ -1
ATXN3-224ENST00000554040 MYPNQ86TC9 1320 aa8.8□□□□□ -1
ATXN3-224ENST00000554040 IRS2Q9Y4H2 1338 aa8.8□□□□□ -1
ATXN3-224ENST00000554040 TFRCP02786 760 aaKnown RBP8.79□□□□□ -1
ATXN3-224ENST00000554040 ITGB2P05107 769 aa8.79□□□□□ -1
ATXN3-224ENST00000554040 MSX1P28360 303 aa8.79□□□□□ -1
ATXN3-224ENST00000554040 OXLD1Q5BKU9 147 aa8.79□□□□□ -1
ATXN3-224ENST00000554040 C1orf229Q6ZS94 237 aaPredicted RBP8.79□□□□□ -1
ATXN3-224ENST00000554040 MPHOSPH8Q99549 860 aa8.79□□□□□ -1
ATXN3-224ENST00000554040 TMEM39BQ9GZU3 492 aa8.79□□□□□ -1
ATXN3-224ENST00000554040 RUBCNLQ9H714 662 aa8.79□□□□□ -1
ATXN3-224ENST00000554040 TDRD3Q9H7E2 651 aaKnown RBP8.79□□□□□ -1
ATXN3-224ENST00000554040 ENAMQ9NRM1 1142 aa8.79□□□□□ -1
ATXN3-224ENST00000554040 SERPINA10Q9UK55 444 aa8.79□□□□□ -1
ATXN3-224ENST00000554040 SNCAIPQ9Y6H5 919 aa8.79□□□□□ -1
ATXN3-224ENST00000554040 TCP10L2B9ZVM9 353 aa8.78□□□□□ -1
ATXN3-224ENST00000554040 SNAP23O00161 211 aa8.78□□□□□ -1
ATXN3-224ENST00000554040 OIP5O43482 229 aa8.78□□□□□ -1
ATXN3-224ENST00000554040 DDX58O95786 925 aaKnown RBP8.78□□□□□ -1
ATXN3-224ENST00000554040 IGKV5-2P06315 115 aa8.78□□□□□ -1
ATXN3-224ENST00000554040 PRKCZQ05513 592 aa8.78□□□□□ -1
ATXN3-224ENST00000554040 CHRNDQ07001 517 aa8.78□□□□□ -1
ATXN3-224ENST00000554040 PPIL2Q13356 520 aa8.78□□□□□ -1
ATXN3-224ENST00000554040 MCM6Q14566 821 aa8.78□□□□□ -1
ATXN3-224ENST00000554040 GNASQ5JWF2 1037 aa8.78□□□□□ -1
ATXN3-224ENST00000554040 GPAT2Q6NUI2 795 aa8.78□□□□□ -1
ATXN3-224ENST00000554040 TMEM214Q6NUQ4 689 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms