RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 SYNPO2Q9UMS6 1093 aa12.18□□□□□ -0.46
TMEM55B-205ENST00000554028 HPS5Q9UPZ3 1129 aa12.18□□□□□ -0.46
TMEM55B-205ENST00000554028 CDK5RAP2Q96SN8 1893 aa12.17□□□□□ -0.46
TMEM55B-205ENST00000554028 PHF20L1A8MW92 1017 aa12.17□□□□□ -0.46
TMEM55B-205ENST00000554028 ADM5C9JUS6 153 aa12.17□□□□□ -0.46
TMEM55B-205ENST00000554028 RAD21O60216 631 aa12.17□□□□□ -0.46
TMEM55B-205ENST00000554028 PARP1P09874 1014 aaKnown RBP12.17□□□□□ -0.46
TMEM55B-205ENST00000554028 SLURP2P0DP57 97 aa12.17□□□□□ -0.46
TMEM55B-205ENST00000554028 EEF2P13639 858 aaKnown RBP12.17□□□□□ -0.46
TMEM55B-205ENST00000554028 RXRAP19793 462 aa12.17□□□□□ -0.46
TMEM55B-205ENST00000554028 GJB2P29033 226 aa12.17□□□□□ -0.46
TMEM55B-205ENST00000554028 ADD1P35611 737 aaKnown RBP12.17□□□□□ -0.46
TMEM55B-205ENST00000554028 IREB2P48200 963 aaKnown RBP12.17□□□□□ -0.46
TMEM55B-205ENST00000554028 NUCB2P80303 420 aa12.17□□□□□ -0.46
TMEM55B-205ENST00000554028 SSRP1Q08945 709 aaKnown RBP12.17□□□□□ -0.46
TMEM55B-205ENST00000554028 TROAPQ12815 778 aa12.17□□□□□ -0.46
TMEM55B-205ENST00000554028 TTLL12Q14166 644 aaPredicted RBP12.17□□□□□ -0.46
TMEM55B-205ENST00000554028 LDHDQ86WU2 507 aa12.17□□□□□ -0.46
TMEM55B-205ENST00000554028 WASF1Q92558 559 aa12.17□□□□□ -0.46
TMEM55B-205ENST00000554028 WRNIP1Q96S55 665 aa12.17□□□□□ -0.46
TMEM55B-205ENST00000554028 AS3MTQ9HBK9 375 aa12.17□□□□□ -0.46
TMEM55B-205ENST00000554028 MTMR7Q9Y216 660 aa12.17□□□□□ -0.46
TMEM55B-205ENST00000554028 GOLGB1Q14789 3259 aaKnown RBP12.17□□□□□ -0.46
TMEM55B-205ENST00000554028 PTPDC1A2A3K4 754 aa12.16□□□□□ -0.46
TMEM55B-205ENST00000554028 USP17L5A8MUK1 530 aa12.16□□□□□ -0.46
TMEM55B-205ENST00000554028 MAP3K9P80192 1104 aa12.16□□□□□ -0.46
TMEM55B-205ENST00000554028 GRM4Q14833 912 aa12.16□□□□□ -0.46
TMEM55B-205ENST00000554028 ARMC9Q7Z3E5 817 aa12.16□□□□□ -0.46
TMEM55B-205ENST00000554028 NSUN7Q8NE18 718 aaKnown RBP12.16□□□□□ -0.46
TMEM55B-205ENST00000554028 ZNF526Q8TF50 670 aaPredicted RBP12.16□□□□□ -0.46
TMEM55B-205ENST00000554028 CDCA5Q96FF9 252 aa12.16□□□□□ -0.46
TMEM55B-205ENST00000554028 GOPCQ9HD26 462 aa12.16□□□□□ -0.46
TMEM55B-205ENST00000554028 RBM27Q9P2N5 1060 aaKnown RBP12.16□□□□□ -0.46
TMEM55B-205ENST00000554028 ORC3Q9UBD5 711 aaPredicted RBP12.16□□□□□ -0.46
TMEM55B-205ENST00000554028 ZNF112Q9UJU3 913 aa12.16□□□□□ -0.46
TMEM55B-205ENST00000554028 ISY1Q9ULR0 285 aaKnown RBP12.16□□□□□ -0.46
TMEM55B-205ENST00000554028 CSADQ9Y600 493 aa12.16□□□□□ -0.46
TMEM55B-205ENST00000554028 NID2Q14112 1375 aa12.16□□□□□ -0.46
TMEM55B-205ENST00000554028 IFNAR1P17181 557 aa12.15□□□□□ -0.46
TMEM55B-205ENST00000554028 CDC27P30260 824 aa12.15□□□□□ -0.46
TMEM55B-205ENST00000554028 GUCY1A2P33402 732 aa12.15□□□□□ -0.46
TMEM55B-205ENST00000554028 PRKG1Q13976 671 aa12.15□□□□□ -0.46
TMEM55B-205ENST00000554028 ASPRV1Q53RT3 343 aa12.15□□□□□ -0.46
TMEM55B-205ENST00000554028 GPATCH4Q5T3I0 446 aaKnown RBP12.15□□□□□ -0.46
TMEM55B-205ENST00000554028 LARP1BQ659C4 914 aaKnown RBP12.15□□□□□ -0.46
TMEM55B-205ENST00000554028 CHADLQ6NUI6 762 aa12.15□□□□□ -0.46
TMEM55B-205ENST00000554028 SCYL3Q8IZE3 742 aa12.15□□□□□ -0.46
TMEM55B-205ENST00000554028 LRRC47Q8N1G4 583 aaKnown RBP12.15□□□□□ -0.46
TMEM55B-205ENST00000554028 SMARCC2Q8TAQ2 1214 aa12.15□□□□□ -0.46
TMEM55B-205ENST00000554028 DCAF4Q8WV16 495 aa12.15□□□□□ -0.46
TMEM55B-205ENST00000554028 KLRG1Q96E93 195 aa12.15□□□□□ -0.46
TMEM55B-205ENST00000554028 DDX11Q96FC9 970 aa12.15□□□□□ -0.46
TMEM55B-205ENST00000554028 FEZ1Q99689 392 aa12.15□□□□□ -0.46
TMEM55B-205ENST00000554028 GLIS2Q9BZE0 524 aaPredicted RBP12.15□□□□□ -0.46
TMEM55B-205ENST00000554028 SCN4AP35499 1836 aa12.15□□□□□ -0.46
TMEM55B-205ENST00000554028 WDR90Q96KV7 1748 aa12.14□□□□□ -0.47
TMEM55B-205ENST00000554028 KLRF2D3W0D1 207 aa12.14□□□□□ -0.47
TMEM55B-205ENST00000554028 F5H6K3 240 aa12.14□□□□□ -0.47
TMEM55B-205ENST00000554028 H3BQV1 296 aa12.14□□□□□ -0.47
TMEM55B-205ENST00000554028 USP2O75604 605 aaPredicted RBP12.14□□□□□ -0.47
TMEM55B-205ENST00000554028 XBP1P17861 261 aa12.14□□□□□ -0.47
TMEM55B-205ENST00000554028 SMARCA1P28370 1054 aa12.14□□□□□ -0.47
TMEM55B-205ENST00000554028 INPP5BP32019 993 aa12.14□□□□□ -0.47
TMEM55B-205ENST00000554028 SLC1A4P43007 532 aa12.14□□□□□ -0.47
TMEM55B-205ENST00000554028 KLRC3Q07444 240 aa12.14□□□□□ -0.47
TMEM55B-205ENST00000554028 ST3GAL1Q11201 340 aa12.14□□□□□ -0.47
TMEM55B-205ENST00000554028 TRIM29Q14134 588 aa12.14□□□□□ -0.47
TMEM55B-205ENST00000554028 RRP1BQ14684 758 aaKnown RBP12.14□□□□□ -0.47
TMEM55B-205ENST00000554028 CCDC96Q2M329 555 aa12.14□□□□□ -0.47
TMEM55B-205ENST00000554028 IFFO2Q5TF58 517 aa12.14□□□□□ -0.47
TMEM55B-205ENST00000554028 SLFN13Q68D06 897 aa12.14□□□□□ -0.47
TMEM55B-205ENST00000554028 TMTC3Q6ZXV5 915 aa12.14□□□□□ -0.47
TMEM55B-205ENST00000554028 CLEC10AQ8IUN9 316 aa12.14□□□□□ -0.47
TMEM55B-205ENST00000554028 CCDC82Q8N4S0 544 aa12.14□□□□□ -0.47
TMEM55B-205ENST00000554028 GMCL1P1Q8NEA9 526 aa12.14□□□□□ -0.47
TMEM55B-205ENST00000554028 SLC26A6Q9BXS9 759 aa12.14□□□□□ -0.47
TMEM55B-205ENST00000554028 RNF26Q9BY78 433 aaPredicted RBP12.14□□□□□ -0.47
TMEM55B-205ENST00000554028 NMRK2Q9NPI5 230 aa12.14□□□□□ -0.47
TMEM55B-205ENST00000554028 FAM217BQ9NTX9 383 aaPredicted RBP12.14□□□□□ -0.47
TMEM55B-205ENST00000554028 SSUH2Q9Y2M2 353 aa12.14□□□□□ -0.47
TMEM55B-205ENST00000554028 TMX2Q9Y320 296 aa12.14□□□□□ -0.47
TMEM55B-205ENST00000554028 WDR33Q9C0J8 1336 aaKnown RBP12.13□□□□□ -0.47
TMEM55B-205ENST00000554028 PALM3A6NDB9 673 aaPredicted RBP12.13□□□□□ -0.47
TMEM55B-205ENST00000554028 JAK2O60674 1132 aa12.13□□□□□ -0.47
TMEM55B-205ENST00000554028 DEXIO95424 95 aa12.13□□□□□ -0.47
TMEM55B-205ENST00000554028 FMNL1O95466 1100 aaPredicted RBP12.13□□□□□ -0.47
TMEM55B-205ENST00000554028 CTDNEP1O95476 244 aa12.13□□□□□ -0.47
TMEM55B-205ENST00000554028 PDHBP11177 359 aa12.13□□□□□ -0.47
TMEM55B-205ENST00000554028 USP14P54578 494 aa12.13□□□□□ -0.47
TMEM55B-205ENST00000554028 JAG1P78504 1218 aa12.13□□□□□ -0.47
TMEM55B-205ENST00000554028 NOL9Q5SY16 702 aaKnown RBP12.13□□□□□ -0.47
TMEM55B-205ENST00000554028 MAP1SQ66K74 1059 aaPredicted RBP12.13□□□□□ -0.47
TMEM55B-205ENST00000554028 USP17L2Q6R6M4 530 aa12.13□□□□□ -0.47
TMEM55B-205ENST00000554028 ANKRD13AQ8IZ07 590 aa12.13□□□□□ -0.47
TMEM55B-205ENST00000554028 PHKBQ93100 1093 aa12.13□□□□□ -0.47
TMEM55B-205ENST00000554028 GMCL1Q96IK5 515 aa12.13□□□□□ -0.47
TMEM55B-205ENST00000554028 GPBP1L1Q9HC44 474 aaPredicted RBP12.13□□□□□ -0.47
TMEM55B-205ENST00000554028 MAD2L2Q9UI95 211 aa12.13□□□□□ -0.47
TMEM55B-205ENST00000554028 STK36Q9NRP7 1315 aa12.12□□□□□ -0.47
TMEM55B-205ENST00000554028 UNCXA6NJT0 531 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms