RNA–Protein interactions for RNA: ENST00000553889.5

PRKCH-209, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-209ENST00000553889 NEDD1Q8NHV4 660 aa10.55□□□□□ -0.72
PRKCH-209ENST00000553889 RPGRQ92834 1020 aaKnown RBP10.55□□□□□ -0.72
PRKCH-209ENST00000553889 GSDMAQ96QA5 445 aa10.55□□□□□ -0.72
PRKCH-209ENST00000553889 SPZ1Q9BXG8 430 aa10.55□□□□□ -0.72
PRKCH-209ENST00000553889 IL17RBQ9NRM6 502 aa10.55□□□□□ -0.72
PRKCH-209ENST00000553889 VPS54Q9P1Q0 977 aa10.55□□□□□ -0.72
PRKCH-209ENST00000553889 ANKIB1Q9P2G1 1089 aa10.55□□□□□ -0.72
PRKCH-209ENST00000553889 GGA1Q9UJY5 639 aa10.55□□□□□ -0.72
PRKCH-209ENST00000553889 TSPY2A6NKD2 308 aa10.54□□□□□ -0.72
PRKCH-209ENST00000553889 LAD1O00515 517 aa10.54□□□□□ -0.72
PRKCH-209ENST00000553889 PRDM1O75626 825 aa10.54□□□□□ -0.72
PRKCH-209ENST00000553889 BMP6P22004 513 aa10.54□□□□□ -0.72
PRKCH-209ENST00000553889 LONP1P36776 959 aaKnown RBP10.54□□□□□ -0.72
PRKCH-209ENST00000553889 GPSM2P81274 684 aa10.54□□□□□ -0.72
PRKCH-209ENST00000553889 LRMPQ12912 555 aa10.54□□□□□ -0.72
PRKCH-209ENST00000553889 TTC38Q5R3I4 469 aa10.54□□□□□ -0.72
PRKCH-209ENST00000553889 VSTM4Q8IW00 320 aa10.54□□□□□ -0.72
PRKCH-209ENST00000553889 C4orf32Q8N8J7 132 aa10.54□□□□□ -0.72
PRKCH-209ENST00000553889 PNMA1Q8ND90 353 aa10.54□□□□□ -0.72
PRKCH-209ENST00000553889 SMARCE1Q969G3 411 aa10.54□□□□□ -0.72
PRKCH-209ENST00000553889 MRIQ9BWK5 157 aa10.54□□□□□ -0.72
PRKCH-209ENST00000553889 XPO4Q9C0E2 1151 aaKnown RBP10.54□□□□□ -0.72
PRKCH-209ENST00000553889 CSRNP2Q9H175 543 aa10.54□□□□□ -0.72
PRKCH-209ENST00000553889 PDCL3Q9H2J4 239 aa10.54□□□□□ -0.72
PRKCH-209ENST00000553889 TMX1Q9H3N1 280 aa10.54□□□□□ -0.72
PRKCH-209ENST00000553889 KAT14Q9H8E8 782 aa10.54□□□□□ -0.72
PRKCH-209ENST00000553889 SERTAD1Q9UHV2 236 aa10.54□□□□□ -0.72
PRKCH-209ENST00000553889 MAN1B1Q9UKM7 699 aa10.54□□□□□ -0.72
PRKCH-209ENST00000553889 NAV1Q8NEY1 1877 aa10.53□□□□□ -0.72
PRKCH-209ENST00000553889 ESYT2A0FGR8 921 aa10.53□□□□□ -0.72
PRKCH-209ENST00000553889 POLRMTO00411 1230 aaKnown RBP10.53□□□□□ -0.72
PRKCH-209ENST00000553889 POLR2DO15514 142 aaKnown RBP10.53□□□□□ -0.72
PRKCH-209ENST00000553889 NRDCO43847 1150 aa10.53□□□□□ -0.72
PRKCH-209ENST00000553889 MYL1P05976 194 aa10.53□□□□□ -0.72
PRKCH-209ENST00000553889 USP17L8P0C7I0 530 aa10.53□□□□□ -0.72
PRKCH-209ENST00000553889 CYP2D6P10635 497 aa10.53□□□□□ -0.72
PRKCH-209ENST00000553889 SKILP12757 684 aa10.53□□□□□ -0.72
PRKCH-209ENST00000553889 RASA1P20936 1047 aa10.53□□□□□ -0.72
PRKCH-209ENST00000553889 PRPHP41219 470 aa10.53□□□□□ -0.72
PRKCH-209ENST00000553889 PLCD1P51178 756 aa10.53□□□□□ -0.72
PRKCH-209ENST00000553889 RHBDL3P58872 404 aa10.53□□□□□ -0.72
PRKCH-209ENST00000553889 TFAP4Q01664 338 aa10.53□□□□□ -0.72
PRKCH-209ENST00000553889 TBX2Q13207 712 aaPredicted RBP10.53□□□□□ -0.72
PRKCH-209ENST00000553889 E2F4Q16254 413 aa10.53□□□□□ -0.72
PRKCH-209ENST00000553889 EARS2Q5JPH6 523 aaKnown RBP10.53□□□□□ -0.72
PRKCH-209ENST00000553889 SMIM5Q71RC9 77 aa10.53□□□□□ -0.72
PRKCH-209ENST00000553889 CMTR1Q8N1G2 835 aaKnown RBP10.53□□□□□ -0.72
PRKCH-209ENST00000553889 MPNDQ8N594 471 aa10.53□□□□□ -0.72
PRKCH-209ENST00000553889 CCDC148Q8NFR7 591 aa10.53□□□□□ -0.72
PRKCH-209ENST00000553889 SH3RF3Q8TEJ3 882 aaPredicted RBP10.53□□□□□ -0.72
PRKCH-209ENST00000553889 ERCC4Q92889 916 aaPredicted RBP10.53□□□□□ -0.72
PRKCH-209ENST00000553889 IFNKQ9P0W0 207 aa10.53□□□□□ -0.72
PRKCH-209ENST00000553889 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.53□□□□□ -0.72
PRKCH-209ENST00000553889 MAD2L2Q9UI95 211 aa10.53□□□□□ -0.72
PRKCH-209ENST00000553889 PCDHA4Q9UN74 947 aa10.53□□□□□ -0.72
PRKCH-209ENST00000553889 QSER1Q2KHR3 1735 aa10.53□□□□□ -0.72
PRKCH-209ENST00000553889 SNED1Q8TER0 1413 aa10.52□□□□□ -0.73
PRKCH-209ENST00000553889 FOCADQ5VW36 1801 aa10.52□□□□□ -0.73
PRKCH-209ENST00000553889 BIN1O00499 593 aa10.52□□□□□ -0.73
PRKCH-209ENST00000553889 CCP110O43303 1012 aa10.52□□□□□ -0.73
PRKCH-209ENST00000553889 HOXA7P31268 230 aaPredicted RBP10.52□□□□□ -0.73
PRKCH-209ENST00000553889 USP5P45974 858 aa10.52□□□□□ -0.73
PRKCH-209ENST00000553889 GRIN1Q05586 938 aa10.52□□□□□ -0.73
PRKCH-209ENST00000553889 DPYDQ12882 1025 aa10.52□□□□□ -0.73
PRKCH-209ENST00000553889 CUL4BQ13620 913 aa10.52□□□□□ -0.73
PRKCH-209ENST00000553889 FAM47AQ5JRC9 791 aa10.52□□□□□ -0.73
PRKCH-209ENST00000553889 DNTTIP2Q5QJE6 756 aaKnown RBP10.52□□□□□ -0.73
PRKCH-209ENST00000553889 BLIDQ8IZY5 108 aa10.52□□□□□ -0.73
PRKCH-209ENST00000553889 CCAR2Q8N163 923 aaKnown RBP10.52□□□□□ -0.73
PRKCH-209ENST00000553889 CCDC82Q8N4S0 544 aa10.52□□□□□ -0.73
PRKCH-209ENST00000553889 FLAD1Q8NFF5 587 aa10.52□□□□□ -0.73
PRKCH-209ENST00000553889 TBC1D16Q8TBP0 767 aa10.52□□□□□ -0.73
PRKCH-209ENST00000553889 GTPBP4Q9BZE4 634 aaKnown RBP10.52□□□□□ -0.73
PRKCH-209ENST00000553889 COA1Q9GZY4 146 aa10.52□□□□□ -0.73
PRKCH-209ENST00000553889 BARHL2Q9NY43 387 aa10.52□□□□□ -0.73
PRKCH-209ENST00000553889 CDK5RAP2Q96SN8 1893 aa10.52□□□□□ -0.73
PRKCH-209ENST00000553889 A0A087WWV3 80 aa10.51□□□□□ -0.73
PRKCH-209ENST00000553889 LRRC10BA6NIK2 292 aa10.51□□□□□ -0.73
PRKCH-209ENST00000553889 PLSCR1O15162 318 aa10.51□□□□□ -0.73
PRKCH-209ENST00000553889 NMT2O60551 498 aa10.51□□□□□ -0.73
PRKCH-209ENST00000553889 UFL1O94874 794 aa10.51□□□□□ -0.73
PRKCH-209ENST00000553889 TOP1P11387 765 aaKnown RBP10.51□□□□□ -0.73
PRKCH-209ENST00000553889 SFPQP23246 707 aaKnown RBP eCLIP10.51□□□□□ -0.73
PRKCH-209ENST00000553889 CDK8P49336 464 aa10.51□□□□□ -0.73
PRKCH-209ENST00000553889 UBASH3AP57075 661 aa10.51□□□□□ -0.73
PRKCH-209ENST00000553889 NLRP5P59047 1200 aa10.51□□□□□ -0.73
PRKCH-209ENST00000553889 GABPAQ06546 454 aa10.51□□□□□ -0.73
PRKCH-209ENST00000553889 DDR1Q08345 913 aa10.51□□□□□ -0.73
PRKCH-209ENST00000553889 PTGDRQ13258 359 aa10.51□□□□□ -0.73
PRKCH-209ENST00000553889 GRIK5Q16478 980 aa10.51□□□□□ -0.73
PRKCH-209ENST00000553889 PPP4R3BQ5MIZ7 849 aa10.51□□□□□ -0.73
PRKCH-209ENST00000553889 ARMCX5Q6P1M9 558 aa10.51□□□□□ -0.73
PRKCH-209ENST00000553889 ZNF444Q8N0Y2 327 aaPredicted RBP10.51□□□□□ -0.73
PRKCH-209ENST00000553889 NLGN1Q8N2Q7 840 aa10.51□□□□□ -0.73
PRKCH-209ENST00000553889 C17orf53Q8N3J3 647 aaPredicted RBP10.51□□□□□ -0.73
PRKCH-209ENST00000553889 IQUBQ8NA54 791 aa10.51□□□□□ -0.73
PRKCH-209ENST00000553889 CCDC12Q8WUD4 166 aaPredicted RBP10.51□□□□□ -0.73
PRKCH-209ENST00000553889 PAGE5Q96GU1 130 aa10.51□□□□□ -0.73
PRKCH-209ENST00000553889 ZMYND12Q9H0C1 365 aa10.51□□□□□ -0.73
PRKCH-209ENST00000553889 CUEDC2Q9H467 287 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms