RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 DCLK2Q8N568 766 aa9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 TTC1Q99614 292 aa9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 NAA15Q9BXJ9 866 aaKnown RBP9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 DZIP3Q86Y13 1208 aaKnown RBP9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 MIA2Q96PC5 1412 aa9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 PREBQ9HCU5 417 aa9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 ANLNQ9NQW6 1124 aa9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 ERCC6Q03468 1493 aa9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 A0A1B0GVG6 124 aa9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 A6NNZ2 444 aa9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 PYGMP11217 842 aa9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 VAV2P52735 878 aa9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 TUBB8Q3ZCM7 444 aa9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 Q6ZUG5 572 aa9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 CEP126Q9P2H0 1117 aa9.94□□□□□ -0.82
GTF2A1-203ENST00000553612 ENC1O14682 589 aa9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 TADA3O75528 432 aa9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 SMTNP53814 917 aa9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 TBC1D25Q3MII6 688 aa9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 PPP1R15BQ5SWA1 713 aa9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 KCNV1Q6PIU1 500 aa9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 CCDC197Q8NCU1 140 aa9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 SH2D4AQ9H788 454 aa9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 SPDYE3A6NKU9 549 aa9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 GCOM1H8Y6P7 765 aaPredicted RBP9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 SKIP12755 728 aa9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 FUT4P22083 530 aa9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 CCT6AP40227 531 aaKnown RBP9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 AFMP43652 599 aa9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 GRIK3Q13003 919 aa9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 ALDH1L2Q3SY69 923 aa9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 PI16Q6UXB8 463 aa9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 NLRP14Q86W24 1093 aa9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 FUT8Q9BYC5 575 aa9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 METTL14Q9HCE5 456 aaKnown RBP9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 ARHGEF38Q9NXL2 777 aa9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 CEP131Q9UPN4 1083 aa9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 EIF3HO15372 352 aaKnown RBP eCLIP9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 AK2P54819 239 aa9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 CCDC25Q86WR0 208 aa9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 NMD3Q96D46 503 aaKnown RBP9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 PHLPP2Q6ZVD8 1323 aa9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 IQCA1LA6NCM1 817 aa9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 ECE1P42892 770 aa9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 ZNF473Q8WTR7 871 aaKnown RBP9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 RBM17Q96I25 401 aaKnown RBP9.93□□□□□ -0.82
GTF2A1-203ENST00000553612 F6X3S4 739 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 SEC24CP53992 1094 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 SAFBQ15424 915 aaKnown RBP eCLIP9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 CCDC43Q96MW1 224 aaKnown RBP9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 MKS1Q9NXB0 559 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 TUBA8Q9NY65 449 aaPredicted RBP9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 ATP8A1Q9Y2Q0 1164 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 TACC3Q9Y6A5 838 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 NCAPD3P42695 1498 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 CHGBP05060 677 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 RAB3IPQ96QF0 476 aaPredicted RBP9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 TSG101Q99816 390 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 HDAC9Q9UKV0 1011 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 DMRT2Q9Y5R5 561 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 CYTH3O43739 400 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 AKR1B10O60218 316 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 TUBBP07437 444 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 IFNAR2P48551 515 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 CYTH1Q15438 398 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 NEK10Q6ZWH5 1172 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 SH2D3CQ8N5H7 860 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 FBXO41Q8TF61 875 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 EVI5LQ96CN4 794 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 DUSP9Q99956 384 aaKnown RBP9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 USP26Q9BXU7 913 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 KIAA1468Q9P260 1216 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 KIF27Q86VH2 1401 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 B4DLN1 442 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 SART1O43290 800 aaKnown RBP9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 NR1I2O75469 434 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 MRPL12P52815 198 aaKnown RBP9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 AIMP1Q12904 312 aaKnown RBP9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 SOGA3Q5TF21 947 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 BHMTQ93088 406 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 MIS12Q9H081 205 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 ZHX3Q9H4I2 956 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 GSTTP1A0A1W2PQM5 241 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 BLVRAP53004 296 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 CCDC122Q5T0U0 273 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 NCAPH2Q6IBW4 605 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 CACNA2D4Q7Z3S7 1137 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 NFATC2IPQ8NCF5 419 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 TSNARE1Q96NA8 513 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 SLC7A5P2Q9GIP4 190 aa9.92□□□□□ -0.82
GTF2A1-203ENST00000553612 COBLO75128 1261 aa9.91□□□□□ -0.82
GTF2A1-203ENST00000553612 SLC4A2P04920 1241 aa9.91□□□□□ -0.82
GTF2A1-203ENST00000553612 UBTFL1P0CB47 393 aaPredicted RBP9.91□□□□□ -0.82
GTF2A1-203ENST00000553612 ETS2P15036 469 aa9.91□□□□□ -0.82
GTF2A1-203ENST00000553612 ARID5AQ03989 594 aa9.91□□□□□ -0.82
GTF2A1-203ENST00000553612 IKQ13123 557 aaPredicted RBP9.91□□□□□ -0.82
GTF2A1-203ENST00000553612 IRF5Q13568 498 aa9.91□□□□□ -0.82
GTF2A1-203ENST00000553612 HS2ST1Q7LGA3 356 aa9.91□□□□□ -0.82
GTF2A1-203ENST00000553612 KRI1Q8N9T8 703 aaKnown RBP9.91□□□□□ -0.82
GTF2A1-203ENST00000553612 IQUBQ8NA54 791 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms