RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 LMTK3Q96Q04 1460 aa12.78□□□□□ -0.36
SYNE2-208ENST00000553289 A0A0D9SFI3 127 aa12.78□□□□□ -0.36
SYNE2-208ENST00000553289 H7C1D1 291 aa12.78□□□□□ -0.36
SYNE2-208ENST00000553289 ZNF500O60304 480 aaPredicted RBP12.78□□□□□ -0.36
SYNE2-208ENST00000553289 GMNNO75496 209 aa12.78□□□□□ -0.36
SYNE2-208ENST00000553289 HARSP12081 509 aaKnown RBP12.78□□□□□ -0.36
SYNE2-208ENST00000553289 PHKG2P15735 406 aa12.78□□□□□ -0.36
SYNE2-208ENST00000553289 CHURC1Q8WUH1 139 aa12.78□□□□□ -0.36
SYNE2-208ENST00000553289 EAF2Q96CJ1 260 aaPredicted RBP12.78□□□□□ -0.36
SYNE2-208ENST00000553289 H0YIN7 160 aa12.77□□□□□ -0.36
SYNE2-208ENST00000553289 PPFIA4O75335 1185 aa12.77□□□□□ -0.36
SYNE2-208ENST00000553289 HSPD1P10809 573 aaKnown RBP12.77□□□□□ -0.36
SYNE2-208ENST00000553289 AFAP1L2Q8N4X5 818 aa12.77□□□□□ -0.36
SYNE2-208ENST00000553289 FANCBQ8NB91 859 aa12.77□□□□□ -0.36
SYNE2-208ENST00000553289 COPRSQ9NQ92 184 aa12.77□□□□□ -0.36
SYNE2-208ENST00000553289 CFAP74Q9C0B2 1584 aa12.77□□□□□ -0.36
SYNE2-208ENST00000553289 SPATA31E1Q6ZUB1 1445 aa12.77□□□□□ -0.36
SYNE2-208ENST00000553289 NOP56O00567 594 aaKnown RBP12.77□□□□□ -0.36
SYNE2-208ENST00000553289 MAPKAPK5Q8IW41 473 aa12.77□□□□□ -0.36
SYNE2-208ENST00000553289 SMC1BQ8NDV3 1235 aa12.77□□□□□ -0.36
SYNE2-208ENST00000553289 TGFBRAP1Q8WUH2 860 aa12.77□□□□□ -0.36
SYNE2-208ENST00000553289 AZI2Q9H6S1 392 aa12.77□□□□□ -0.36
SYNE2-208ENST00000553289 SYNMO15061 1565 aa12.77□□□□□ -0.36
SYNE2-208ENST00000553289 A0A1W2PQ27 194 aa12.77□□□□□ -0.37
SYNE2-208ENST00000553289 A0A1W2PQ64 194 aa12.77□□□□□ -0.37
SYNE2-208ENST00000553289 A0A1W2PQD8 194 aa12.77□□□□□ -0.37
SYNE2-208ENST00000553289 KCNJ18B7U540 433 aa12.77□□□□□ -0.37
SYNE2-208ENST00000553289 N4BP1O75113 896 aaKnown RBP12.77□□□□□ -0.37
SYNE2-208ENST00000553289 KCNJ12Q14500 433 aa12.77□□□□□ -0.37
SYNE2-208ENST00000553289 UBE3CQ15386 1083 aa12.77□□□□□ -0.37
SYNE2-208ENST00000553289 TAF12Q16514 161 aa12.77□□□□□ -0.37
SYNE2-208ENST00000553289 GBP6Q6ZN66 633 aa12.77□□□□□ -0.37
SYNE2-208ENST00000553289 SLFN12Q8IYM2 578 aa12.77□□□□□ -0.37
SYNE2-208ENST00000553289 MYOCDQ8IZQ8 938 aa12.77□□□□□ -0.37
SYNE2-208ENST00000553289 ARHGAP24Q8N264 748 aa12.77□□□□□ -0.37
SYNE2-208ENST00000553289 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.77□□□□□ -0.37
SYNE2-208ENST00000553289 PCDHB13Q9Y5F0 798 aa12.77□□□□□ -0.37
SYNE2-208ENST00000553289 ADCY9O60503 1353 aa12.77□□□□□ -0.37
SYNE2-208ENST00000553289 GTPBP6O43824 516 aaPredicted RBP12.77□□□□□ -0.37
SYNE2-208ENST00000553289 INPP5BP32019 993 aa12.77□□□□□ -0.37
SYNE2-208ENST00000553289 ITIH3Q06033 890 aa12.77□□□□□ -0.37
SYNE2-208ENST00000553289 UAP1Q16222 522 aaPredicted RBP12.77□□□□□ -0.37
SYNE2-208ENST00000553289 DCUN1D2Q6PH85 259 aa12.77□□□□□ -0.37
SYNE2-208ENST00000553289 CACNA2D3Q8IZS8 1091 aa12.77□□□□□ -0.37
SYNE2-208ENST00000553289 IL17REQ8NFR9 667 aa12.77□□□□□ -0.37
SYNE2-208ENST00000553289 USP28Q96RU2 1077 aa12.77□□□□□ -0.37
SYNE2-208ENST00000553289 CIAO1O76071 339 aa12.76□□□□□ -0.37
SYNE2-208ENST00000553289 PDE6AP16499 860 aa12.76□□□□□ -0.37
SYNE2-208ENST00000553289 PTH1RQ03431 593 aa12.76□□□□□ -0.37
SYNE2-208ENST00000553289 OTUD6AQ7L8S5 288 aa12.76□□□□□ -0.37
SYNE2-208ENST00000553289 C10orf67Q8IYJ2 551 aa12.76□□□□□ -0.37
SYNE2-208ENST00000553289 RRAGAQ7L523 313 aa12.76□□□□□ -0.37
SYNE2-208ENST00000553289 TRMT2AQ8IZ69 625 aaKnown RBP12.76□□□□□ -0.37
SYNE2-208ENST00000553289 AMFRQ9UKV5 643 aa12.76□□□□□ -0.37
SYNE2-208ENST00000553289 TPCN1Q9ULQ1 816 aa12.76□□□□□ -0.37
SYNE2-208ENST00000553289 CCDC160A6NGH7 325 aa12.76□□□□□ -0.37
SYNE2-208ENST00000553289 MYCLP12524 364 aaPredicted RBP12.76□□□□□ -0.37
SYNE2-208ENST00000553289 STAT1P42224 750 aa12.76□□□□□ -0.37
SYNE2-208ENST00000553289 MORC3Q14149 939 aa12.76□□□□□ -0.37
SYNE2-208ENST00000553289 TRMT44Q8IYL2 757 aaKnown RBP12.76□□□□□ -0.37
SYNE2-208ENST00000553289 H0YCG3 227 aa12.76□□□□□ -0.37
SYNE2-208ENST00000553289 XRCC5P13010 732 aaKnown RBP12.76□□□□□ -0.37
SYNE2-208ENST00000553289 BLZF1Q9H2G9 400 aa12.76□□□□□ -0.37
SYNE2-208ENST00000553289 HAUS4Q9H6D7 363 aa12.76□□□□□ -0.37
SYNE2-208ENST00000553289 NDUFB9Q9Y6M9 179 aa12.76□□□□□ -0.37
SYNE2-208ENST00000553289 ATP7BP35670 1465 aa12.76□□□□□ -0.37
SYNE2-208ENST00000553289 TRIM37O94972 964 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 NEDD9Q14511 834 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 NLRX1Q86UT6 975 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 NELFCDQ8IXH7 590 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 HYOU1Q9Y4L1 999 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 USP17L12C9JPN9 530 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 USP17L21D6R901 530 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 P4HA1P13674 534 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 CCDC105Q8IYK2 499 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 VPS52Q8N1B4 723 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 TEKT1Q969V4 418 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 HAUS2Q9NVX0 235 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 MLH3Q9UHC1 1453 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 SCG2P13521 617 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 CA8P35219 290 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 LONP1P36776 959 aaKnown RBP12.75□□□□□ -0.37
SYNE2-208ENST00000553289 TYW1BQ6NUM6 668 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 SND1Q7KZF4 910 aaKnown RBP eCLIP12.75□□□□□ -0.37
SYNE2-208ENST00000553289 KLHL7Q8IXQ5 586 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 CCT6BQ92526 530 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 MAP4K1Q92918 833 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 NR1I2O75469 434 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 OR52Z1P0C646 297 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 ATP2B4P23634 1241 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 GBP1P32455 592 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 HHATQ5VTY9 493 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 SPATA1Q5VX52 437 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 P3H4Q92791 437 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 CUEDC2Q9H467 287 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 METTL14Q9HCE5 456 aaKnown RBP12.75□□□□□ -0.37
SYNE2-208ENST00000553289 A0A1B0GUA9 196 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 CFBP00751 764 aa12.75□□□□□ -0.37
SYNE2-208ENST00000553289 TPD52P55327 224 aaPredicted RBP12.75□□□□□ -0.37
SYNE2-208ENST00000553289 NEK8Q86SG6 692 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms