RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 TNRC18O15417 2968 aaPredicted RBP23.01■■□□□ 1.27
PTCH1-227ENST00000553256 PRDM1O75626 825 aa23■■□□□ 1.27
PTCH1-227ENST00000553256 FGAP02671 866 aa23■■□□□ 1.27
PTCH1-227ENST00000553256 IRF5Q13568 498 aa23■■□□□ 1.27
PTCH1-227ENST00000553256 TTC22Q5TAA0 569 aa23■■□□□ 1.27
PTCH1-227ENST00000553256 GTF3C2Q8WUA4 911 aaPredicted RBP23■■□□□ 1.27
PTCH1-227ENST00000553256 LPAR1Q92633 364 aa23■■□□□ 1.27
PTCH1-227ENST00000553256 RILPL2Q969X0 211 aa23■■□□□ 1.27
PTCH1-227ENST00000553256 IL25Q9H293 177 aa23■■□□□ 1.27
PTCH1-227ENST00000553256 NYAP2Q9P242 653 aa23■■□□□ 1.27
PTCH1-227ENST00000553256 PLXNB2O15031 1838 aa23■■□□□ 1.27
PTCH1-227ENST00000553256 KIAA0100Q14667 2235 aaKnown RBP23■■□□□ 1.27
PTCH1-227ENST00000553256 A0A0G2JMZ2 1700 aa22.99■■□□□ 1.27
PTCH1-227ENST00000553256 RBBP6Q7Z6E9 1792 aaKnown RBP22.99■■□□□ 1.27
PTCH1-227ENST00000553256 HOXD10P28358 340 aa22.99■■□□□ 1.27
PTCH1-227ENST00000553256 FLT3LGP49771 235 aa22.99■■□□□ 1.27
PTCH1-227ENST00000553256 ERVK-9P63128 1117 aa22.99■■□□□ 1.27
PTCH1-227ENST00000553256 ERVK-24P63145 666 aa22.99■■□□□ 1.27
PTCH1-227ENST00000553256 STK11IPQ8N1F8 1099 aa22.99■■□□□ 1.27
PTCH1-227ENST00000553256 GPRC5AQ8NFJ5 357 aa22.99■■□□□ 1.27
PTCH1-227ENST00000553256 SH3TC2Q8TF17 1288 aa22.99■■□□□ 1.27
PTCH1-227ENST00000553256 MKL1Q969V6 931 aa22.99■■□□□ 1.27
PTCH1-227ENST00000553256 NBPF3Q9H094 633 aa22.99■■□□□ 1.27
PTCH1-227ENST00000553256 ARHGEF10LQ9HCE6 1279 aa22.99■■□□□ 1.27
PTCH1-227ENST00000553256 INCENPQ9NQS7 918 aa22.99■■□□□ 1.27
PTCH1-227ENST00000553256 BTBD7Q9P203 1132 aa22.99■■□□□ 1.27
PTCH1-227ENST00000553256 RABGAP1Q9Y3P9 1069 aa22.99■■□□□ 1.27
PTCH1-227ENST00000553256 CCDC171Q6TFL3 1326 aa22.99■■□□□ 1.27
PTCH1-227ENST00000553256 NOVP48745 357 aa22.98■■□□□ 1.27
PTCH1-227ENST00000553256 NEDD1Q8NHV4 660 aa22.98■■□□□ 1.27
PTCH1-227ENST00000553256 PORCNQ9H237 461 aa22.98■■□□□ 1.27
PTCH1-227ENST00000553256 MKNK2Q9HBH9 465 aa22.98■■□□□ 1.27
PTCH1-227ENST00000553256 ADAMTS5Q9UNA0 930 aa22.98■■□□□ 1.27
PTCH1-227ENST00000553256 PARP14Q460N5 1801 aa22.97■■□□□ 1.27
PTCH1-227ENST00000553256 POTEFA5A3E0 1075 aa22.97■■□□□ 1.27
PTCH1-227ENST00000553256 TNPO2O14787 897 aaKnown RBP22.97■■□□□ 1.27
PTCH1-227ENST00000553256 SLC9C1Q4G0N8 1177 aa22.97■■□□□ 1.27
PTCH1-227ENST00000553256 USP6NLQ92738 828 aa22.97■■□□□ 1.27
PTCH1-227ENST00000553256 MTMR4Q9NYA4 1195 aa22.97■■□□□ 1.27
PTCH1-227ENST00000553256 WDR46O15213 610 aaKnown RBP22.96■■□□□ 1.27
PTCH1-227ENST00000553256 CTDSPL2Q05D32 466 aa22.96■■□□□ 1.27
PTCH1-227ENST00000553256 NKX2-3Q8TAU0 364 aa22.96■■□□□ 1.27
PTCH1-227ENST00000553256 PXYLP1Q8TE99 480 aa22.96■■□□□ 1.27
PTCH1-227ENST00000553256 CEP95Q96GE4 821 aa22.96■■□□□ 1.27
PTCH1-227ENST00000553256 SH2D4AQ9H788 454 aa22.96■■□□□ 1.27
PTCH1-227ENST00000553256 ORC4O43929 436 aa22.95■■□□□ 1.26
PTCH1-227ENST00000553256 GRK4P32298 578 aa22.95■■□□□ 1.26
PTCH1-227ENST00000553256 DSG3P32926 999 aa22.95■■□□□ 1.26
PTCH1-227ENST00000553256 COG2Q14746 738 aa22.95■■□□□ 1.26
PTCH1-227ENST00000553256 SPICE1Q8N0Z3 855 aa22.95■■□□□ 1.26
PTCH1-227ENST00000553256 ZNF287Q9HBT7 754 aa22.95■■□□□ 1.26
PTCH1-227ENST00000553256 IL17RBQ9NRM6 502 aa22.95■■□□□ 1.26
PTCH1-227ENST00000553256 SYNPO2Q9UMS6 1093 aa22.95■■□□□ 1.26
PTCH1-227ENST00000553256 PDE4BQ07343 736 aa22.94■■□□□ 1.26
PTCH1-227ENST00000553256 MTFR1Q15390 333 aa22.94■■□□□ 1.26
PTCH1-227ENST00000553256 ZNF444Q8N0Y2 327 aaPredicted RBP22.94■■□□□ 1.26
PTCH1-227ENST00000553256 FAM47AQ5JRC9 791 aa22.93■■□□□ 1.26
PTCH1-227ENST00000553256 MORN1Q5T089 497 aa22.93■■□□□ 1.26
PTCH1-227ENST00000553256 CWC27Q6UX04 472 aaKnown RBP22.93■■□□□ 1.26
PTCH1-227ENST00000553256 NBPF11Q86T75 865 aa22.93■■□□□ 1.26
PTCH1-227ENST00000553256 SLAIN1Q8ND83 568 aa22.93■■□□□ 1.26
PTCH1-227ENST00000553256 RAET1EQ8TD07 263 aa22.93■■□□□ 1.26
PTCH1-227ENST00000553256 COA7Q96BR5 231 aa22.93■■□□□ 1.26
PTCH1-227ENST00000553256 HOXC10Q9NYD6 342 aa22.93■■□□□ 1.26
PTCH1-227ENST00000553256 NDUFB10O96000 172 aa22.92■■□□□ 1.26
PTCH1-227ENST00000553256 IGHA2P01877 340 aa22.92■■□□□ 1.26
PTCH1-227ENST00000553256 MAPK4P31152 587 aa22.92■■□□□ 1.26
PTCH1-227ENST00000553256 TFAP4Q01664 338 aa22.92■■□□□ 1.26
PTCH1-227ENST00000553256 REPS2Q8NFH8 660 aa22.92■■□□□ 1.26
PTCH1-227ENST00000553256 PAGR1Q9BTK6 254 aa22.92■■□□□ 1.26
PTCH1-227ENST00000553256 FBXO28Q9NVF7 368 aa22.92■■□□□ 1.26
PTCH1-227ENST00000553256 F5H6K3 240 aa22.91■■□□□ 1.26
PTCH1-227ENST00000553256 HIP1O00291 1037 aa22.91■■□□□ 1.26
PTCH1-227ENST00000553256 ADCY3O60266 1144 aa22.91■■□□□ 1.26
PTCH1-227ENST00000553256 SLC3A2P08195 630 aaKnown RBP22.91■■□□□ 1.26
PTCH1-227ENST00000553256 KLRC3Q07444 240 aa22.91■■□□□ 1.26
PTCH1-227ENST00000553256 GPR142Q7Z601 462 aa22.91■■□□□ 1.26
PTCH1-227ENST00000553256 TBC1D10CQ8IV04 446 aa22.91■■□□□ 1.26
PTCH1-227ENST00000553256 ATG4CQ96DT6 458 aa22.91■■□□□ 1.26
PTCH1-227ENST00000553256 CLIP2Q9UDT6 1046 aa22.91■■□□□ 1.26
PTCH1-227ENST00000553256 TTLL1O95922 423 aa22.9■■□□□ 1.26
PTCH1-227ENST00000553256 ELNP15502 786 aa22.9■■□□□ 1.26
PTCH1-227ENST00000553256 GMCL1P1Q8NEA9 526 aa22.9■■□□□ 1.26
PTCH1-227ENST00000553256 TANGO6Q9C0B7 1094 aa22.9■■□□□ 1.26
PTCH1-227ENST00000553256 GOPCQ9HD26 462 aa22.9■■□□□ 1.26
PTCH1-227ENST00000553256 DIAPH3Q9NSV4 1193 aa22.9■■□□□ 1.26
PTCH1-227ENST00000553256 TSPY3P0CV98 308 aa22.89■■□□□ 1.25
PTCH1-227ENST00000553256 TSPY8P0CW00 308 aa22.89■■□□□ 1.25
PTCH1-227ENST00000553256 XRCC5P13010 732 aaKnown RBP22.89■■□□□ 1.25
PTCH1-227ENST00000553256 CHMLP26374 656 aa22.89■■□□□ 1.25
PTCH1-227ENST00000553256 ATP2B2Q01814 1243 aa22.89■■□□□ 1.25
PTCH1-227ENST00000553256 MLLT1Q03111 559 aaPredicted RBP22.89■■□□□ 1.25
PTCH1-227ENST00000553256 FAM83BQ5T0W9 1011 aa22.89■■□□□ 1.25
PTCH1-227ENST00000553256 MB21D1Q8N884 522 aa22.89■■□□□ 1.25
PTCH1-227ENST00000553256 NUP88Q99567 741 aaPredicted RBP22.89■■□□□ 1.25
PTCH1-227ENST00000553256 DSCC1Q9BVC3 393 aa22.89■■□□□ 1.25
PTCH1-227ENST00000553256 MOV10L1Q9BXT6 1211 aaKnown RBP22.89■■□□□ 1.25
PTCH1-227ENST00000553256 PPP1R9AQ9ULJ8 1098 aa22.89■■□□□ 1.25
PTCH1-227ENST00000553256 NMT2O60551 498 aa22.88■■□□□ 1.25
PTCH1-227ENST00000553256 FLOT1O75955 427 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms