RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 DIAPH3Q9NSV4 1193 aa5.65□□□□□ -1.5
PFDN5-219ENST00000553171 RYDENQ9NUL5 291 aaKnown RBP5.65□□□□□ -1.5
PFDN5-219ENST00000553171 IFT57Q9NWB7 429 aa5.65□□□□□ -1.5
PFDN5-219ENST00000553171 ZNHIT6Q9NWK9 470 aaKnown RBP5.65□□□□□ -1.5
PFDN5-219ENST00000553171 RABGAP1Q9Y3P9 1069 aa5.65□□□□□ -1.5
PFDN5-219ENST00000553171 N6AMT1Q9Y5N5 214 aa5.65□□□□□ -1.5
PFDN5-219ENST00000553171 MYBL2P10244 700 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 TNNT1P13805 278 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 ENPP1P22413 925 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 CCNCP24863 283 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 HSD3B2P26439 372 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 PDE4AP27815 886 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 KIF5BP33176 963 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 RDXP35241 583 aaKnown RBP5.64□□□□□ -1.51
PFDN5-219ENST00000553171 TSPAN7P41732 249 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 SLC7A5Q01650 507 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 ICA1Q05084 483 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 EIF4A2Q14240 407 aaKnown RBP5.64□□□□□ -1.51
PFDN5-219ENST00000553171 PDIA5Q14554 519 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 WTAPQ15007 396 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 SLC4A8Q2Y0W8 1093 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 CFAP70Q5T0N1 1121 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 KCNV1Q6PIU1 500 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 C11orf74Q86VG3 221 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 MYLK4Q86YV6 388 aaPredicted RBP5.64□□□□□ -1.51
PFDN5-219ENST00000553171 CCDC65Q8IXS2 484 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 CCDC144CPQ8IYA2 1237 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 TRIML1Q8N9V2 468 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 DRAXINQ8NBI3 349 aaPredicted RBP5.64□□□□□ -1.51
PFDN5-219ENST00000553171 UHMK1Q8TAS1 419 aaKnown RBP5.64□□□□□ -1.51
PFDN5-219ENST00000553171 JARID2Q92833 1246 aaPredicted RBP5.64□□□□□ -1.51
PFDN5-219ENST00000553171 L3MBTL2Q969R5 705 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 NACC2Q96BF6 587 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 TRIM11Q96F44 468 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 BICD1Q96G01 975 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 ZNF496Q96IT1 587 aaPredicted RBP5.64□□□□□ -1.51
PFDN5-219ENST00000553171 PAWRQ96IZ0 340 aaKnown RBP5.64□□□□□ -1.51
PFDN5-219ENST00000553171 CRACR2AQ9BSW2 395 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 CDK19Q9BWU1 502 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.64□□□□□ -1.51
PFDN5-219ENST00000553171 NACA2Q9H009 215 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 PIF1Q9H611 641 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 UPF2Q9HAU5 1272 aaKnown RBP5.64□□□□□ -1.51
PFDN5-219ENST00000553171 MKS1Q9NXB0 559 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 CLIC5Q9NZA1 410 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 DKK3Q9UBP4 350 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 GJA3Q9Y6H8 435 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 IRS2Q9Y4H2 1338 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 GPR179Q6PRD1 2367 aa5.64□□□□□ -1.51
PFDN5-219ENST00000553171 TPRP12270 2363 aaKnown RBP5.63□□□□□ -1.51
PFDN5-219ENST00000553171 BOLA2-SMG1P6H3BVE0 249 aa5.63□□□□□ -1.51
PFDN5-219ENST00000553171 TBX3O15119 743 aa5.63□□□□□ -1.51
PFDN5-219ENST00000553171 MYO1BO43795 1136 aa5.63□□□□□ -1.51
PFDN5-219ENST00000553171 ERLIN1O75477 346 aa5.63□□□□□ -1.51
PFDN5-219ENST00000553171 RECKO95980 971 aa5.63□□□□□ -1.51
PFDN5-219ENST00000553171 IL4RP24394 825 aa5.63□□□□□ -1.51
PFDN5-219ENST00000553171 TM4SF4P48230 202 aa5.63□□□□□ -1.51
PFDN5-219ENST00000553171 RRP1P56182 461 aaKnown RBP5.63□□□□□ -1.51
PFDN5-219ENST00000553171 DEUP1Q05D60 604 aa5.63□□□□□ -1.51
PFDN5-219ENST00000553171 COL9A2Q14055 689 aaPredicted RBP5.63□□□□□ -1.51
PFDN5-219ENST00000553171 SIM2Q14190 667 aaPredicted RBP5.63□□□□□ -1.51
PFDN5-219ENST00000553171 RBBP5Q15291 538 aaKnown RBP5.63□□□□□ -1.51
PFDN5-219ENST00000553171 PKN1Q16512 942 aa5.63□□□□□ -1.51
PFDN5-219ENST00000553171 SLC5A9Q2M3M2 681 aa5.63□□□□□ -1.51
PFDN5-219ENST00000553171 PREPLQ4J6C6 727 aaPredicted RBP5.63□□□□□ -1.51
PFDN5-219ENST00000553171 FAM133BQ5BKY9 247 aaKnown RBP5.63□□□□□ -1.51
PFDN5-219ENST00000553171 CCDC30Q5VVM6 783 aa5.63□□□□□ -1.51
PFDN5-219ENST00000553171 FAAH2Q6GMR7 532 aa5.63□□□□□ -1.51
PFDN5-219ENST00000553171 SPATS2Q86XZ4 545 aaKnown RBP5.63□□□□□ -1.51
PFDN5-219ENST00000553171 SUGP1Q8IWZ8 645 aaKnown RBP5.63□□□□□ -1.51
PFDN5-219ENST00000553171 C2orf69Q8N8R5 385 aa5.63□□□□□ -1.51
PFDN5-219ENST00000553171 PRPF38AQ8NAV1 312 aaKnown RBP5.63□□□□□ -1.51
PFDN5-219ENST00000553171 APPL2Q8NEU8 664 aa5.63□□□□□ -1.51
PFDN5-219ENST00000553171 CCDC26Q8TAB7 109 aa5.63□□□□□ -1.51
PFDN5-219ENST00000553171 FAM76AQ8TAV0 307 aa5.63□□□□□ -1.51
PFDN5-219ENST00000553171 SH3TC2Q8TF17 1288 aa5.63□□□□□ -1.51
PFDN5-219ENST00000553171 PIGBQ92521 554 aa5.63□□□□□ -1.51
PFDN5-219ENST00000553171 RTF1Q92541 710 aaKnown RBP5.63□□□□□ -1.51
PFDN5-219ENST00000553171 RPGRQ92834 1020 aaKnown RBP5.63□□□□□ -1.51
PFDN5-219ENST00000553171 RELTQ969Z4 430 aa5.63□□□□□ -1.51
PFDN5-219ENST00000553171 TBC1D31Q96DN5 1066 aa5.63□□□□□ -1.51
PFDN5-219ENST00000553171 SPAG5Q96R06 1193 aa5.63□□□□□ -1.51
PFDN5-219ENST00000553171 CDX2Q99626 313 aaPredicted RBP5.63□□□□□ -1.51
PFDN5-219ENST00000553171 R3HDMLQ9H3Y0 253 aa5.63□□□□□ -1.51
PFDN5-219ENST00000553171 GBA2Q9HCG7 927 aaPredicted RBP5.63□□□□□ -1.51
PFDN5-219ENST00000553171 ZNF69Q9UC07 566 aa5.63□□□□□ -1.51
PFDN5-219ENST00000553171 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.63□□□□□ -1.51
PFDN5-219ENST00000553171 TRAK1Q9UPV9 953 aa5.63□□□□□ -1.51
PFDN5-219ENST00000553171 TMEM98Q9Y2Y6 226 aa5.63□□□□□ -1.51
PFDN5-219ENST00000553171 MYBBP1AQ9BQG0 1328 aaKnown RBP5.63□□□□□ -1.51
PFDN5-219ENST00000553171 MAST4O15021 2626 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 GRXCR2A6NFK2 248 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 A6NJY4 79 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 DNAJC6O75061 913 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 SASH1O94885 1247 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 ZNF24P17028 368 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 ATP2B1P20020 1258 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 NUBP1P53384 320 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 NHLH1Q02575 133 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 MECOMQ03112 1051 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms