RNA–Protein interactions for RNA: ENST00000553131.5

ERBB3-221, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2 BASIC

Gene ERBB3, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-221ENST00000553131 RAPGEF4Q8WZA2 1011 aa9.05□□□□□ -0.96
ERBB3-221ENST00000553131 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.05□□□□□ -0.96
ERBB3-221ENST00000553131 ACBD3Q9H3P7 528 aa9.05□□□□□ -0.96
ERBB3-221ENST00000553131 LCMT1Q9UIC8 334 aa9.05□□□□□ -0.96
ERBB3-221ENST00000553131 ADGRG1Q9Y653 693 aa9.05□□□□□ -0.96
ERBB3-221ENST00000553131 RPS6KA5O75582 802 aa9.04□□□□□ -0.96
ERBB3-221ENST00000553131 IARSP41252 1262 aaKnown RBP9.04□□□□□ -0.96
ERBB3-221ENST00000553131 FMR1Q06787 632 aaKnown RBP eCLIP9.04□□□□□ -0.96
ERBB3-221ENST00000553131 SF3B2Q13435 895 aaKnown RBP9.04□□□□□ -0.96
ERBB3-221ENST00000553131 IRF5Q13568 498 aa9.04□□□□□ -0.96
ERBB3-221ENST00000553131 HSP90B2PQ58FF3 399 aa9.04□□□□□ -0.96
ERBB3-221ENST00000553131 KANK3Q6NY19 840 aa9.04□□□□□ -0.96
ERBB3-221ENST00000553131 NCAPG2Q86XI2 1143 aa9.04□□□□□ -0.96
ERBB3-221ENST00000553131 SNRNP27Q8WVK2 155 aaKnown RBP9.04□□□□□ -0.96
ERBB3-221ENST00000553131 SLC24A3Q9HC58 644 aa9.04□□□□□ -0.96
ERBB3-221ENST00000553131 A0A1B0GTH6 734 aa9.04□□□□□ -0.96
ERBB3-221ENST00000553131 CTAGE9A4FU28 777 aa9.04□□□□□ -0.96
ERBB3-221ENST00000553131 SOWAHDA6NJG2 315 aa9.04□□□□□ -0.96
ERBB3-221ENST00000553131 FOXN1O15353 648 aa9.04□□□□□ -0.96
ERBB3-221ENST00000553131 ERCC5P28715 1186 aaPredicted RBP9.04□□□□□ -0.96
ERBB3-221ENST00000553131 MORC3Q14149 939 aa9.04□□□□□ -0.96
ERBB3-221ENST00000553131 KIF4BQ2VIQ3 1234 aa9.04□□□□□ -0.96
ERBB3-221ENST00000553131 LRRC24Q50LG9 513 aa9.04□□□□□ -0.96
ERBB3-221ENST00000553131 IRX2Q9BZI1 471 aaPredicted RBP9.04□□□□□ -0.96
ERBB3-221ENST00000553131 MKRN1Q9UHC7 482 aaKnown RBP9.04□□□□□ -0.96
ERBB3-221ENST00000553131 L1RE1Q9UN81 338 aa9.04□□□□□ -0.96
ERBB3-221ENST00000553131 KDM6AO15550 1401 aaPredicted RBP9.03□□□□□ -0.96
ERBB3-221ENST00000553131 SARSP49591 514 aaKnown RBP9.03□□□□□ -0.96
ERBB3-221ENST00000553131 PLCD1P51178 756 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 MKRN4PQ13434 485 aaPredicted RBP9.03□□□□□ -0.96
ERBB3-221ENST00000553131 MTF1Q14872 753 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 ZNF569Q5MCW4 686 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 PACS2Q86VP3 889 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 IQCF2Q8IXL9 164 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 TRMT44Q8IYL2 757 aaKnown RBP9.03□□□□□ -0.96
ERBB3-221ENST00000553131 AGAP3Q96P47 875 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 AKAP2Q9Y2D5 859 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 TMCO5BA8MYB1 307 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 SH2B2O14492 632 aaPredicted RBP9.03□□□□□ -0.96
ERBB3-221ENST00000553131 PHKG2P15735 406 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 ALDH1B1P30837 517 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 RWDD2BP57060 319 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 PIP4K2BP78356 416 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 ZNF662Q6ZS27 426 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 RPUSD2Q8IZ73 545 aaKnown RBP9.03□□□□□ -0.96
ERBB3-221ENST00000553131 FAM71BQ8TC56 605 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 C17orf50Q8WW18 174 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 PHKBQ93100 1093 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 CEP89Q96ST8 783 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 ABCB6Q9NP58 842 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 TPX2Q9ULW0 747 aaKnown RBP9.03□□□□□ -0.96
ERBB3-221ENST00000553131 RABL2BQ9UNT1 228 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 POLR2DO15514 142 aaKnown RBP9.03□□□□□ -0.96
ERBB3-221ENST00000553131 GPAA1O43292 621 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 ZBTB43O43298 467 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 NEBLO76041 1014 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 SAFBQ15424 915 aaKnown RBP eCLIP9.03□□□□□ -0.96
ERBB3-221ENST00000553131 WHAMMP3Q1A5X7 153 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 APOA5Q6Q788 366 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 RAD9BQ6WBX8 426 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 IGSF22Q8N9C0 903 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 WASF1Q92558 559 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 TAF4BQ92750 862 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 ZNF594Q96JF6 807 aaPredicted RBP9.03□□□□□ -0.96
ERBB3-221ENST00000553131 TMEM87BQ96K49 555 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 PNKPQ96T60 521 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 PUS7LQ9H0K6 701 aaKnown RBP9.03□□□□□ -0.96
ERBB3-221ENST00000553131 SAMSN1Q9NSI8 373 aaKnown RBP9.03□□□□□ -0.96
ERBB3-221ENST00000553131 ABCF2Q9UG63 623 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 SERTAD1Q9UHV2 236 aa9.03□□□□□ -0.96
ERBB3-221ENST00000553131 ABCC12Q96J65 1359 aa9.02□□□□□ -0.97
ERBB3-221ENST00000553131 CTAGE15A4D2H0 777 aa9.02□□□□□ -0.97
ERBB3-221ENST00000553131 CTAGE8P0CG41 777 aa9.02□□□□□ -0.97
ERBB3-221ENST00000553131 MECOMQ03112 1051 aa9.02□□□□□ -0.97
ERBB3-221ENST00000553131 RBL2Q08999 1139 aa9.02□□□□□ -0.97
ERBB3-221ENST00000553131 INF2Q27J81 1249 aa9.02□□□□□ -0.97
ERBB3-221ENST00000553131 TSNAXIP1Q2TAA8 658 aa9.02□□□□□ -0.97
ERBB3-221ENST00000553131 FILIP1LQ4L180 1135 aa9.02□□□□□ -0.97
ERBB3-221ENST00000553131 RASGRP2Q7LDG7 609 aa9.02□□□□□ -0.97
ERBB3-221ENST00000553131 CTAGE6Q86UF2 777 aa9.02□□□□□ -0.97
ERBB3-221ENST00000553131 NOSTRINQ8IVI9 506 aa9.02□□□□□ -0.97
ERBB3-221ENST00000553131 CTAGE4Q8IX94 777 aa9.02□□□□□ -0.97
ERBB3-221ENST00000553131 CCDC51Q96ER9 411 aa9.02□□□□□ -0.97
ERBB3-221ENST00000553131 CTAGE1Q96RT6 745 aa9.02□□□□□ -0.97
ERBB3-221ENST00000553131 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.02□□□□□ -0.97
ERBB3-221ENST00000553131 UBA5Q9GZZ9 404 aa9.02□□□□□ -0.97
ERBB3-221ENST00000553131 TTF2Q9UNY4 1162 aaKnown RBP9.02□□□□□ -0.97
ERBB3-221ENST00000553131 FAN1Q9Y2M0 1017 aa9.02□□□□□ -0.97
ERBB3-221ENST00000553131 CREB3O43889 395 aa9.02□□□□□ -0.97
ERBB3-221ENST00000553131 TATP17735 454 aaPredicted RBP9.02□□□□□ -0.97
ERBB3-221ENST00000553131 PTPREP23469 700 aa9.02□□□□□ -0.97
ERBB3-221ENST00000553131 HOXD11P31277 338 aaPredicted RBP9.02□□□□□ -0.97
ERBB3-221ENST00000553131 SSRP1Q08945 709 aaKnown RBP9.02□□□□□ -0.97
ERBB3-221ENST00000553131 CASP8Q14790 479 aa9.02□□□□□ -0.97
ERBB3-221ENST00000553131 SPECC1Q5M775 1068 aa9.02□□□□□ -0.97
ERBB3-221ENST00000553131 MICU3Q86XE3 530 aa9.02□□□□□ -0.97
ERBB3-221ENST00000553131 CNGA4Q8IV77 575 aa9.02□□□□□ -0.97
ERBB3-221ENST00000553131 IFNL2Q8IZJ0 200 aa9.02□□□□□ -0.97
ERBB3-221ENST00000553131 STK11IPQ8N1F8 1099 aa9.02□□□□□ -0.97
ERBB3-221ENST00000553131 ZNF579Q8NAF0 562 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms