RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 TSPY2A6NKD2 308 aa13.87□□□□□ -0.19
TRAFD1-209ENST00000552896 CYP2C8P10632 490 aa13.87□□□□□ -0.19
TRAFD1-209ENST00000552896 OSBPP22059 807 aa13.87□□□□□ -0.19
TRAFD1-209ENST00000552896 IRX3P78415 501 aaPredicted RBP13.87□□□□□ -0.19
TRAFD1-209ENST00000552896 C17orf99Q6UX52 265 aa13.87□□□□□ -0.19
TRAFD1-209ENST00000552896 MFSD6Q6ZSS7 791 aa13.87□□□□□ -0.19
TRAFD1-209ENST00000552896 SIAH1Q8IUQ4 282 aa13.87□□□□□ -0.19
TRAFD1-209ENST00000552896 CEP95Q96GE4 821 aa13.87□□□□□ -0.19
TRAFD1-209ENST00000552896 ERO1AQ96HE7 468 aa13.87□□□□□ -0.19
TRAFD1-209ENST00000552896 ASCC2Q9H1I8 757 aaPredicted RBP13.87□□□□□ -0.19
TRAFD1-209ENST00000552896 VCPKMTQ9H867 229 aa13.87□□□□□ -0.19
TRAFD1-209ENST00000552896 GOPCQ9HD26 462 aa13.87□□□□□ -0.19
TRAFD1-209ENST00000552896 MTMR4Q9NYA4 1195 aa13.87□□□□□ -0.19
TRAFD1-209ENST00000552896 ZNF236Q9UL36 1845 aa13.87□□□□□ -0.19
TRAFD1-209ENST00000552896 MYH6P13533 1939 aa13.86□□□□□ -0.19
TRAFD1-209ENST00000552896 RANBP6O60518 1105 aaKnown RBP13.86□□□□□ -0.19
TRAFD1-209ENST00000552896 TTLL1O95922 423 aa13.86□□□□□ -0.19
TRAFD1-209ENST00000552896 BCRP11274 1271 aa13.86□□□□□ -0.19
TRAFD1-209ENST00000552896 TFAP4Q01664 338 aa13.86□□□□□ -0.19
TRAFD1-209ENST00000552896 SP3Q02447 781 aa13.86□□□□□ -0.19
TRAFD1-209ENST00000552896 PTH1RQ03431 593 aa13.86□□□□□ -0.19
TRAFD1-209ENST00000552896 FAM47AQ5JRC9 791 aa13.86□□□□□ -0.19
TRAFD1-209ENST00000552896 CHRDL2Q6WN34 429 aa13.86□□□□□ -0.19
TRAFD1-209ENST00000552896 GTF3C2Q8WUA4 911 aaPredicted RBP13.86□□□□□ -0.19
TRAFD1-209ENST00000552896 TOMM22Q9NS69 142 aa13.86□□□□□ -0.19
TRAFD1-209ENST00000552896 USP17L15C9J2P7 530 aa13.85□□□□□ -0.19
TRAFD1-209ENST00000552896 USP17L13C9JLJ4 530 aa13.85□□□□□ -0.19
TRAFD1-209ENST00000552896 USP17L11C9JVI0 530 aa13.85□□□□□ -0.19
TRAFD1-209ENST00000552896 USP17L18D6R9N7 530 aa13.85□□□□□ -0.19
TRAFD1-209ENST00000552896 USP17L22D6RA61 530 aa13.85□□□□□ -0.19
TRAFD1-209ENST00000552896 USP17L17D6RBQ6 530 aa13.85□□□□□ -0.19
TRAFD1-209ENST00000552896 USP17L19D6RCP7 530 aa13.85□□□□□ -0.19
TRAFD1-209ENST00000552896 USP17L20D6RJB6 530 aa13.85□□□□□ -0.19
TRAFD1-209ENST00000552896 WDR46O15213 610 aaKnown RBP13.85□□□□□ -0.19
TRAFD1-209ENST00000552896 GCLCP48506 637 aaPredicted RBP13.85□□□□□ -0.19
TRAFD1-209ENST00000552896 ATP2B2Q01814 1243 aa13.85□□□□□ -0.19
TRAFD1-209ENST00000552896 USP17L24Q0WX57 530 aa13.85□□□□□ -0.19
TRAFD1-209ENST00000552896 FAM110CQ1W6H9 321 aa13.85□□□□□ -0.19
TRAFD1-209ENST00000552896 RRP12Q5JTH9 1297 aaKnown RBP13.85□□□□□ -0.19
TRAFD1-209ENST00000552896 COL13A1Q5TAT6 717 aaPredicted RBP13.85□□□□□ -0.19
TRAFD1-209ENST00000552896 KIAA1211Q6ZU35 1233 aa13.85□□□□□ -0.19
TRAFD1-209ENST00000552896 CTU1Q7Z7A3 348 aaKnown RBP13.85□□□□□ -0.19
TRAFD1-209ENST00000552896 ESR2Q92731 530 aa13.85□□□□□ -0.19
TRAFD1-209ENST00000552896 MAP4K1Q92918 833 aa13.85□□□□□ -0.19
TRAFD1-209ENST00000552896 LSG1Q9H089 658 aaKnown RBP13.85□□□□□ -0.19
TRAFD1-209ENST00000552896 RPAP3Q9H6T3 665 aaPredicted RBP13.85□□□□□ -0.19
TRAFD1-209ENST00000552896 CNNM2Q9H8M5 875 aa13.85□□□□□ -0.19
TRAFD1-209ENST00000552896 INCENPQ9NQS7 918 aa13.85□□□□□ -0.19
TRAFD1-209ENST00000552896 CPA4Q9UI42 421 aa13.85□□□□□ -0.19
TRAFD1-209ENST00000552896 RBBP6Q7Z6E9 1792 aaKnown RBP13.84□□□□□ -0.19
TRAFD1-209ENST00000552896 NOVP48745 357 aa13.84□□□□□ -0.19
TRAFD1-209ENST00000552896 HERVK_113P62684 666 aa13.84□□□□□ -0.19
TRAFD1-209ENST00000552896 LACTBP83111 547 aaPredicted RBP13.84□□□□□ -0.19
TRAFD1-209ENST00000552896 KIAA1755Q5JYT7 1200 aa13.84□□□□□ -0.19
TRAFD1-209ENST00000552896 CATSPERGQ6ZRH7 1159 aa13.84□□□□□ -0.19
TRAFD1-209ENST00000552896 GMCL1P1Q8NEA9 526 aa13.84□□□□□ -0.19
TRAFD1-209ENST00000552896 MKL1Q969V6 931 aa13.84□□□□□ -0.19
TRAFD1-209ENST00000552896 TANGO6Q9C0B7 1094 aa13.84□□□□□ -0.19
TRAFD1-209ENST00000552896 ANO2Q9NQ90 1003 aa13.84□□□□□ -0.19
TRAFD1-209ENST00000552896 TCP11L1Q9NUJ3 509 aa13.84□□□□□ -0.19
TRAFD1-209ENST00000552896 RBM8AQ9Y5S9 174 aaKnown RBP13.84□□□□□ -0.19
TRAFD1-209ENST00000552896 MYPNQ86TC9 1320 aa13.84□□□□□ -0.19
TRAFD1-209ENST00000552896 PLXNA1Q9UIW2 1896 aa13.83□□□□□ -0.2
TRAFD1-209ENST00000552896 CYP21A2P08686 494 aa13.83□□□□□ -0.2
TRAFD1-209ENST00000552896 KIF22Q14807 665 aa13.83□□□□□ -0.2
TRAFD1-209ENST00000552896 LBX2Q6XYB7 198 aa13.83□□□□□ -0.2
TRAFD1-209ENST00000552896 SPICE1Q8N0Z3 855 aa13.83□□□□□ -0.2
TRAFD1-209ENST00000552896 CD99L2Q8TCZ2 262 aa13.83□□□□□ -0.2
TRAFD1-209ENST00000552896 KRT23Q9C075 422 aa13.83□□□□□ -0.2
TRAFD1-209ENST00000552896 IL17RBQ9NRM6 502 aa13.83□□□□□ -0.2
TRAFD1-209ENST00000552896 MORF4L1Q9UBU8 362 aa13.83□□□□□ -0.2
TRAFD1-209ENST00000552896 CLIP2Q9UDT6 1046 aa13.83□□□□□ -0.2
TRAFD1-209ENST00000552896 ZNFX1Q9P2E3 1918 aaKnown RBP13.83□□□□□ -0.2
TRAFD1-209ENST00000552896 SPDYE16A6NNV3 312 aaPredicted RBP13.82□□□□□ -0.2
TRAFD1-209ENST00000552896 NMT2O60551 498 aa13.82□□□□□ -0.2
TRAFD1-209ENST00000552896 NDUFB10O96000 172 aa13.82□□□□□ -0.2
TRAFD1-209ENST00000552896 ARHGEF6Q15052 776 aa13.82□□□□□ -0.2
TRAFD1-209ENST00000552896 LRRC47Q8N1G4 583 aaKnown RBP13.82□□□□□ -0.2
TRAFD1-209ENST00000552896 ANKRD13CQ8N6S4 541 aa13.82□□□□□ -0.2
TRAFD1-209ENST00000552896 STX8Q9UNK0 236 aa13.82□□□□□ -0.2
TRAFD1-209ENST00000552896 CENPFP49454 3210 aa13.81□□□□□ -0.2
TRAFD1-209ENST00000552896 B4E1Z4 1266 aa13.81□□□□□ -0.2
TRAFD1-209ENST00000552896 F5H6K3 240 aa13.81□□□□□ -0.2
TRAFD1-209ENST00000552896 KDM4AO75164 1064 aa13.81□□□□□ -0.2
TRAFD1-209ENST00000552896 GNRH1P01148 92 aa13.81□□□□□ -0.2
TRAFD1-209ENST00000552896 KLRC3Q07444 240 aa13.81□□□□□ -0.2
TRAFD1-209ENST00000552896 PKN2Q16513 984 aaKnown RBP13.81□□□□□ -0.2
TRAFD1-209ENST00000552896 CCDC178Q5BJE1 867 aa13.81□□□□□ -0.2
TRAFD1-209ENST00000552896 OTOP1Q7RTM1 612 aa13.81□□□□□ -0.2
TRAFD1-209ENST00000552896 IQCA1Q86XH1 822 aa13.81□□□□□ -0.2
TRAFD1-209ENST00000552896 P2RX7Q99572 595 aaKnown RBP13.81□□□□□ -0.2
TRAFD1-209ENST00000552896 RAD21O60216 631 aa13.8□□□□□ -0.2
TRAFD1-209ENST00000552896 FLOT1O75955 427 aa13.8□□□□□ -0.2
TRAFD1-209ENST00000552896 FCGRTP55899 365 aa13.8□□□□□ -0.2
TRAFD1-209ENST00000552896 CAP1Q01518 475 aa13.8□□□□□ -0.2
TRAFD1-209ENST00000552896 TRDNQ13061 729 aa13.8□□□□□ -0.2
TRAFD1-209ENST00000552896 COG2Q14746 738 aa13.8□□□□□ -0.2
TRAFD1-209ENST00000552896 FAM83BQ5T0W9 1011 aa13.8□□□□□ -0.2
TRAFD1-209ENST00000552896 TNS4Q8IZW8 715 aa13.8□□□□□ -0.2
TRAFD1-209ENST00000552896 MB21D1Q8N884 522 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms