RNA–Protein interactions for RNA: ENST00000552428.6

R3HDM2-214, Transcript of R3H domain containing 2, humanhuman

TSL 5

Gene R3HDM2, Length 430 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-214ENST00000552428 PICK1Q9NRD5 415 aa7.37□□□□□ -1.23
R3HDM2-214ENST00000552428 MAPRE3Q9UPY8 281 aa7.37□□□□□ -1.23
R3HDM2-214ENST00000552428 SMARCA2P51531 1590 aa7.37□□□□□ -1.23
R3HDM2-214ENST00000552428 IGF1RP08069 1367 aa7.36□□□□□ -1.23
R3HDM2-214ENST00000552428 TNIKQ9UKE5 1360 aa7.36□□□□□ -1.23
R3HDM2-214ENST00000552428 TRBV23-1A0A0A0MS06 115 aa7.36□□□□□ -1.23
R3HDM2-214ENST00000552428 CCDC66A2RUB6 948 aa7.36□□□□□ -1.23
R3HDM2-214ENST00000552428 GSG1L2A8MUP6 293 aa7.36□□□□□ -1.23
R3HDM2-214ENST00000552428 ALG1L2C9J202 215 aa7.36□□□□□ -1.23
R3HDM2-214ENST00000552428 L1CAMP32004 1257 aa7.36□□□□□ -1.23
R3HDM2-214ENST00000552428 SETDB1Q15047 1291 aa7.36□□□□□ -1.23
R3HDM2-214ENST00000552428 CT47A1Q5JQC4 288 aaPredicted RBP7.36□□□□□ -1.23
R3HDM2-214ENST00000552428 PPM1JQ5JR12 505 aa7.36□□□□□ -1.23
R3HDM2-214ENST00000552428 HID1Q8IV36 788 aa7.36□□□□□ -1.23
R3HDM2-214ENST00000552428 SCUBE1Q8IWY4 988 aa7.36□□□□□ -1.23
R3HDM2-214ENST00000552428 TMEM192Q8IY95 271 aa7.36□□□□□ -1.23
R3HDM2-214ENST00000552428 ZNF507Q8TCN5 953 aa7.36□□□□□ -1.23
R3HDM2-214ENST00000552428 APBA2Q99767 749 aa7.36□□□□□ -1.23
R3HDM2-214ENST00000552428 FAM126AQ9BYI3 521 aaPredicted RBP7.36□□□□□ -1.23
R3HDM2-214ENST00000552428 PRDM6Q9NQX0 595 aa7.36□□□□□ -1.23
R3HDM2-214ENST00000552428 INTS7Q9NVH2 962 aaKnown RBP7.36□□□□□ -1.23
R3HDM2-214ENST00000552428 SUSD2Q9UGT4 822 aa7.36□□□□□ -1.23
R3HDM2-214ENST00000552428 CUX2O14529 1486 aa7.36□□□□□ -1.23
R3HDM2-214ENST00000552428 NINLQ9Y2I6 1382 aa7.35□□□□□ -1.23
R3HDM2-214ENST00000552428 FSD2A1L4K1 749 aa7.35□□□□□ -1.23
R3HDM2-214ENST00000552428 M0R082 166 aa7.35□□□□□ -1.23
R3HDM2-214ENST00000552428 ADAM11O75078 769 aa7.35□□□□□ -1.23
R3HDM2-214ENST00000552428 UBOX5O94941 541 aa7.35□□□□□ -1.23
R3HDM2-214ENST00000552428 RAPGEF3O95398 923 aa7.35□□□□□ -1.23
R3HDM2-214ENST00000552428 DLGAP3O95886 979 aa7.35□□□□□ -1.23
R3HDM2-214ENST00000552428 NTF4P34130 210 aa7.35□□□□□ -1.23
R3HDM2-214ENST00000552428 NFKB2Q00653 900 aa7.35□□□□□ -1.23
R3HDM2-214ENST00000552428 HS1BP3Q53T59 392 aa7.35□□□□□ -1.23
R3HDM2-214ENST00000552428 BRDTQ58F21 947 aaPredicted RBP7.35□□□□□ -1.23
R3HDM2-214ENST00000552428 AKAP4Q5JQC9 854 aa7.35□□□□□ -1.23
R3HDM2-214ENST00000552428 FAM209AQ5JX71 171 aa7.35□□□□□ -1.23
R3HDM2-214ENST00000552428 DDX42Q86XP3 938 aaKnown RBP eCLIP7.35□□□□□ -1.23
R3HDM2-214ENST00000552428 GALNT11Q8NCW6 608 aa7.35□□□□□ -1.23
R3HDM2-214ENST00000552428 ZNF417Q8TAU3 575 aa7.35□□□□□ -1.23
R3HDM2-214ENST00000552428 CCDC74BQ96LY2 380 aa7.35□□□□□ -1.23
R3HDM2-214ENST00000552428 ZNF587Q96SQ5 575 aaPredicted RBP7.35□□□□□ -1.23
R3HDM2-214ENST00000552428 HAUS7Q99871 368 aa7.35□□□□□ -1.23
R3HDM2-214ENST00000552428 MAGEC2Q9UBF1 373 aaPredicted RBP7.35□□□□□ -1.23
R3HDM2-214ENST00000552428 DNAJC25-GNG10A0A024R161 153 aa7.34□□□□□ -1.23
R3HDM2-214ENST00000552428 TMPRSS2O15393 492 aa7.34□□□□□ -1.23
R3HDM2-214ENST00000552428 CLEC3AO75596 197 aa7.34□□□□□ -1.23
R3HDM2-214ENST00000552428 EPHX1P07099 455 aa7.34□□□□□ -1.23
R3HDM2-214ENST00000552428 FGFR1P11362 822 aa7.34□□□□□ -1.23
R3HDM2-214ENST00000552428 ZSCAN20P17040 1043 aaPredicted RBP7.34□□□□□ -1.23
R3HDM2-214ENST00000552428 CD68P34810 354 aaPredicted RBP7.34□□□□□ -1.23
R3HDM2-214ENST00000552428 CAP2P40123 477 aa7.34□□□□□ -1.23
R3HDM2-214ENST00000552428 PPP2R2AP63151 447 aa7.34□□□□□ -1.23
R3HDM2-214ENST00000552428 HEATR6Q6AI08 1181 aaKnown RBP7.34□□□□□ -1.23
R3HDM2-214ENST00000552428 KIAA1211Q6ZU35 1233 aa7.34□□□□□ -1.23
R3HDM2-214ENST00000552428 ILDR2Q71H61 639 aa7.34□□□□□ -1.23
R3HDM2-214ENST00000552428 CREBRFQ8IUR6 639 aa7.34□□□□□ -1.23
R3HDM2-214ENST00000552428 FMNL3Q8IVF7 1028 aa7.34□□□□□ -1.23
R3HDM2-214ENST00000552428 KCT2Q8NC54 265 aa7.34□□□□□ -1.23
R3HDM2-214ENST00000552428 RNF214Q8ND24 703 aa7.34□□□□□ -1.23
R3HDM2-214ENST00000552428 PSMD1Q99460 953 aa7.34□□□□□ -1.23
R3HDM2-214ENST00000552428 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.34□□□□□ -1.23
R3HDM2-214ENST00000552428 MYH16Q9H6N6 1097 aa7.34□□□□□ -1.23
R3HDM2-214ENST00000552428 RAD18Q9NS91 495 aa7.34□□□□□ -1.23
R3HDM2-214ENST00000552428 CRIM1Q9NZV1 1036 aa7.34□□□□□ -1.23
R3HDM2-214ENST00000552428 LRP2BPQ9P2M1 347 aa7.34□□□□□ -1.23
R3HDM2-214ENST00000552428 CEP162Q5TB80 1403 aa7.34□□□□□ -1.23
R3HDM2-214ENST00000552428 SMG6Q86US8 1419 aaKnown RBP7.34□□□□□ -1.23
R3HDM2-214ENST00000552428 C9IYK1 514 aa7.33□□□□□ -1.24
R3HDM2-214ENST00000552428 CBFA2T2O43439 604 aa7.33□□□□□ -1.24
R3HDM2-214ENST00000552428 GBP1P32455 592 aa7.33□□□□□ -1.24
R3HDM2-214ENST00000552428 EVA1CP58658 441 aa7.33□□□□□ -1.24
R3HDM2-214ENST00000552428 SUMO1P63165 101 aaKnown RBP7.33□□□□□ -1.24
R3HDM2-214ENST00000552428 MAP7Q14244 749 aa7.33□□□□□ -1.24
R3HDM2-214ENST00000552428 FOXD4L6Q3SYB3 417 aaPredicted RBP7.33□□□□□ -1.24
R3HDM2-214ENST00000552428 EXOSC6Q5RKV6 272 aaKnown RBP7.33□□□□□ -1.24
R3HDM2-214ENST00000552428 TDRD10Q5VZ19 366 aaKnown RBP7.33□□□□□ -1.24
R3HDM2-214ENST00000552428 WWC2Q6AWC2 1192 aa7.33□□□□□ -1.24
R3HDM2-214ENST00000552428 CTR9Q6PD62 1173 aa7.33□□□□□ -1.24
R3HDM2-214ENST00000552428 FOXD4L3Q6VB84 417 aaPredicted RBP7.33□□□□□ -1.24
R3HDM2-214ENST00000552428 ZNF227Q86WZ6 799 aa7.33□□□□□ -1.24
R3HDM2-214ENST00000552428 AFAP1L2Q8N4X5 818 aa7.33□□□□□ -1.24
R3HDM2-214ENST00000552428 CYB5D2Q8WUJ1 264 aa7.33□□□□□ -1.24
R3HDM2-214ENST00000552428 CLUHP3Q96NS8 147 aa7.33□□□□□ -1.24
R3HDM2-214ENST00000552428 TARS2Q9BW92 718 aaKnown RBP7.33□□□□□ -1.24
R3HDM2-214ENST00000552428 KLHL25Q9H0H3 589 aa7.33□□□□□ -1.24
R3HDM2-214ENST00000552428 FBRSQ9HAH7 460 aa7.33□□□□□ -1.24
R3HDM2-214ENST00000552428 SLC52A1Q9NWF4 448 aa7.33□□□□□ -1.24
R3HDM2-214ENST00000552428 THRAP3Q9Y2W1 955 aaKnown RBP7.33□□□□□ -1.24
R3HDM2-214ENST00000552428 DDX3YO15523 660 aaKnown RBP7.32□□□□□ -1.24
R3HDM2-214ENST00000552428 CAPNS1P04632 268 aa7.32□□□□□ -1.24
R3HDM2-214ENST00000552428 TP53P04637 393 aaPredicted RBP7.32□□□□□ -1.24
R3HDM2-214ENST00000552428 ITGAVP06756 1048 aa7.32□□□□□ -1.24
R3HDM2-214ENST00000552428 TRIM61Q5EBN2 209 aa7.32□□□□□ -1.24
R3HDM2-214ENST00000552428 YOD1Q5VVQ6 348 aaPredicted RBP7.32□□□□□ -1.24
R3HDM2-214ENST00000552428 CHSY3Q70JA7 882 aa7.32□□□□□ -1.24
R3HDM2-214ENST00000552428 LRRTM3Q86VH5 581 aa7.32□□□□□ -1.24
R3HDM2-214ENST00000552428 ZNF513Q8N8E2 541 aaPredicted RBP7.32□□□□□ -1.24
R3HDM2-214ENST00000552428 FANCD2OSQ96PS1 177 aa7.32□□□□□ -1.24
R3HDM2-214ENST00000552428 GBP3Q9H0R5 595 aa7.32□□□□□ -1.24
R3HDM2-214ENST00000552428 ATXN3LQ9H3M9 355 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms