RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 NFKB2Q00653 900 aa5.59□□□□□ -1.51
LSM6P2-201ENST00000552208 SRSF11Q05519 484 aaKnown RBP5.59□□□□□ -1.51
LSM6P2-201ENST00000552208 HSP90AB2PQ58FF8 381 aa5.59□□□□□ -1.51
LSM6P2-201ENST00000552208 ODR4Q5SWX8 454 aa5.59□□□□□ -1.51
LSM6P2-201ENST00000552208 TDRD10Q5VZ19 366 aaKnown RBP5.59□□□□□ -1.51
LSM6P2-201ENST00000552208 UBE3DQ7Z6J8 389 aa5.59□□□□□ -1.51
LSM6P2-201ENST00000552208 ZNF227Q86WZ6 799 aa5.59□□□□□ -1.51
LSM6P2-201ENST00000552208 FMNL3Q8IVF7 1028 aa5.59□□□□□ -1.51
LSM6P2-201ENST00000552208 PHACTR4Q8IZ21 702 aa5.59□□□□□ -1.51
LSM6P2-201ENST00000552208 BAHD1Q8TBE0 780 aaPredicted RBP5.59□□□□□ -1.51
LSM6P2-201ENST00000552208 PPP1R13LQ8WUF5 828 aa5.59□□□□□ -1.51
LSM6P2-201ENST00000552208 SMARCC1Q92922 1105 aaPredicted RBP5.59□□□□□ -1.51
LSM6P2-201ENST00000552208 VWCEQ96DN2 955 aa5.59□□□□□ -1.51
LSM6P2-201ENST00000552208 BTBD6Q96KE9 485 aa5.59□□□□□ -1.51
LSM6P2-201ENST00000552208 AARSD1Q9BTE6 412 aaKnown RBP5.59□□□□□ -1.51
LSM6P2-201ENST00000552208 TARS2Q9BW92 718 aaKnown RBP5.59□□□□□ -1.51
LSM6P2-201ENST00000552208 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.59□□□□□ -1.51
LSM6P2-201ENST00000552208 WASHC2CQ9Y4E1 1318 aa5.58□□□□□ -1.52
LSM6P2-201ENST00000552208 DLL1O00548 723 aa5.58□□□□□ -1.52
LSM6P2-201ENST00000552208 TP53P04637 393 aaPredicted RBP5.58□□□□□ -1.52
LSM6P2-201ENST00000552208 C6orf222P0C671 652 aaPredicted RBP5.58□□□□□ -1.52
LSM6P2-201ENST00000552208 PABPC1P11940 636 aaKnown RBP5.58□□□□□ -1.52
LSM6P2-201ENST00000552208 GRIA2P42262 883 aa5.58□□□□□ -1.52
LSM6P2-201ENST00000552208 HEATR6Q6AI08 1181 aaKnown RBP5.58□□□□□ -1.52
LSM6P2-201ENST00000552208 CHSY3Q70JA7 882 aa5.58□□□□□ -1.52
LSM6P2-201ENST00000552208 LRRTM3Q86VH5 581 aa5.58□□□□□ -1.52
LSM6P2-201ENST00000552208 DMRTC2Q8IXT2 367 aaPredicted RBP5.58□□□□□ -1.52
LSM6P2-201ENST00000552208 RAVER1Q8IY67 606 aaKnown RBP5.58□□□□□ -1.52
LSM6P2-201ENST00000552208 DTWD1Q8N5C7 304 aa5.58□□□□□ -1.52
LSM6P2-201ENST00000552208 UBR7Q8N806 425 aa5.58□□□□□ -1.52
LSM6P2-201ENST00000552208 CYB5D2Q8WUJ1 264 aa5.58□□□□□ -1.52
LSM6P2-201ENST00000552208 EDARADDQ8WWZ3 215 aa5.58□□□□□ -1.52
LSM6P2-201ENST00000552208 DDX1Q92499 740 aaKnown RBP5.58□□□□□ -1.52
LSM6P2-201ENST00000552208 MRGPRX3Q96LB0 322 aa5.58□□□□□ -1.52
LSM6P2-201ENST00000552208 CDC6Q99741 560 aa5.58□□□□□ -1.52
LSM6P2-201ENST00000552208 LGR4Q9BXB1 951 aa5.58□□□□□ -1.52
LSM6P2-201ENST00000552208 COL25A1Q9BXS0 654 aaPredicted RBP5.58□□□□□ -1.52
LSM6P2-201ENST00000552208 TRIM39Q9HCM9 518 aa5.58□□□□□ -1.52
LSM6P2-201ENST00000552208 MAGEC2Q9UBF1 373 aaPredicted RBP5.58□□□□□ -1.52
LSM6P2-201ENST00000552208 EID1Q9Y6B2 187 aa5.58□□□□□ -1.52
LSM6P2-201ENST00000552208 SHOXO15266 292 aa5.57□□□□□ -1.52
LSM6P2-201ENST00000552208 TBX1O43435 398 aa5.57□□□□□ -1.52
LSM6P2-201ENST00000552208 CLEC3AO75596 197 aa5.57□□□□□ -1.52
LSM6P2-201ENST00000552208 DNAJC8O75937 253 aaPredicted RBP5.57□□□□□ -1.52
LSM6P2-201ENST00000552208 GDF11O95390 407 aa5.57□□□□□ -1.52
LSM6P2-201ENST00000552208 POU3F2P20265 443 aaPredicted RBP5.57□□□□□ -1.52
LSM6P2-201ENST00000552208 KRT76Q01546 638 aa5.57□□□□□ -1.52
LSM6P2-201ENST00000552208 MAP7Q14244 749 aa5.57□□□□□ -1.52
LSM6P2-201ENST00000552208 NBPF12Q5TAG4 269 aaPredicted RBP5.57□□□□□ -1.52
LSM6P2-201ENST00000552208 STRA8Q7Z7C7 330 aa5.57□□□□□ -1.52
LSM6P2-201ENST00000552208 KCT2Q8NC54 265 aa5.57□□□□□ -1.52
LSM6P2-201ENST00000552208 LRRN4CLQ8ND94 238 aa5.57□□□□□ -1.52
LSM6P2-201ENST00000552208 GSTCDQ8NEC7 633 aa5.57□□□□□ -1.52
LSM6P2-201ENST00000552208 UBASH3BQ8TF42 649 aa5.57□□□□□ -1.52
LSM6P2-201ENST00000552208 RCC1LQ96I51 464 aaKnown RBP5.57□□□□□ -1.52
LSM6P2-201ENST00000552208 CEP89Q96ST8 783 aa5.57□□□□□ -1.52
LSM6P2-201ENST00000552208 DPH2Q9BQC3 489 aaPredicted RBP5.57□□□□□ -1.52
LSM6P2-201ENST00000552208 SUGCTQ9HAC7 445 aa5.57□□□□□ -1.52
LSM6P2-201ENST00000552208 RAD18Q9NS91 495 aa5.57□□□□□ -1.52
LSM6P2-201ENST00000552208 FAM86C1Q9NVL1 165 aa5.57□□□□□ -1.52
LSM6P2-201ENST00000552208 MCM8Q9UJA3 840 aa5.57□□□□□ -1.52
LSM6P2-201ENST00000552208 PRODHO43272 600 aa5.56□□□□□ -1.52
LSM6P2-201ENST00000552208 OIP5O43482 229 aa5.56□□□□□ -1.52
LSM6P2-201ENST00000552208 GBP1P32455 592 aa5.56□□□□□ -1.52
LSM6P2-201ENST00000552208 SUMO1P63165 101 aaKnown RBP5.56□□□□□ -1.52
LSM6P2-201ENST00000552208 TTLL4Q14679 1199 aa5.56□□□□□ -1.52
LSM6P2-201ENST00000552208 PRAMEF13Q5VWM6 474 aa5.56□□□□□ -1.52
LSM6P2-201ENST00000552208 DCAF15Q66K64 600 aa5.56□□□□□ -1.52
LSM6P2-201ENST00000552208 NSMFQ6X4W1 530 aa5.56□□□□□ -1.52
LSM6P2-201ENST00000552208 KIAA1211Q6ZU35 1233 aa5.56□□□□□ -1.52
LSM6P2-201ENST00000552208 SMG8Q8ND04 991 aaKnown RBP5.56□□□□□ -1.52
LSM6P2-201ENST00000552208 BVESQ8NE79 360 aa5.56□□□□□ -1.52
LSM6P2-201ENST00000552208 SLC7A14Q8TBB6 771 aa5.56□□□□□ -1.52
LSM6P2-201ENST00000552208 ISL2Q96A47 359 aa5.56□□□□□ -1.52
LSM6P2-201ENST00000552208 FGD4Q96M96 766 aa5.56□□□□□ -1.52
LSM6P2-201ENST00000552208 ATXN3LQ9H3M9 355 aa5.56□□□□□ -1.52
LSM6P2-201ENST00000552208 ZNF451Q9Y4E5 1061 aa5.56□□□□□ -1.52
LSM6P2-201ENST00000552208 PHLDB1Q86UU1 1377 aa5.55□□□□□ -1.52
LSM6P2-201ENST00000552208 CCDC194A0A1B0GVG4 234 aa5.55□□□□□ -1.52
LSM6P2-201ENST00000552208 SHISA8B8ZZ34 492 aa5.55□□□□□ -1.52
LSM6P2-201ENST00000552208 WISP1O95388 367 aa5.55□□□□□ -1.52
LSM6P2-201ENST00000552208 TIAF1O95411 115 aa5.55□□□□□ -1.52
LSM6P2-201ENST00000552208 MAP4K4O95819 1239 aaPredicted RBP5.55□□□□□ -1.52
LSM6P2-201ENST00000552208 ADH5P11766 374 aa5.55□□□□□ -1.52
LSM6P2-201ENST00000552208 HOXB4P17483 251 aaPredicted RBP5.55□□□□□ -1.52
LSM6P2-201ENST00000552208 CD247P20963 164 aa5.55□□□□□ -1.52
LSM6P2-201ENST00000552208 SOX4Q06945 474 aaPredicted RBP5.55□□□□□ -1.52
LSM6P2-201ENST00000552208 FBXO11Q86XK2 927 aa5.55□□□□□ -1.52
LSM6P2-201ENST00000552208 TRIM59Q8IWR1 403 aa5.55□□□□□ -1.52
LSM6P2-201ENST00000552208 ARHGEF39Q8N4T4 335 aa5.55□□□□□ -1.52
LSM6P2-201ENST00000552208 GALNT6Q8NCL4 622 aa5.55□□□□□ -1.52
LSM6P2-201ENST00000552208 DNAJB8Q8NHS0 232 aa5.55□□□□□ -1.52
LSM6P2-201ENST00000552208 IPO9Q96P70 1041 aaKnown RBP5.55□□□□□ -1.52
LSM6P2-201ENST00000552208 MTFR1LQ9H019 292 aa5.55□□□□□ -1.52
LSM6P2-201ENST00000552208 PICK1Q9NRD5 415 aa5.55□□□□□ -1.52
LSM6P2-201ENST00000552208 GEMIN8Q9NWZ8 242 aaKnown RBP5.55□□□□□ -1.52
LSM6P2-201ENST00000552208 WHRNQ9P202 907 aa5.55□□□□□ -1.52
LSM6P2-201ENST00000552208 LRP2BPQ9P2M1 347 aa5.55□□□□□ -1.52
LSM6P2-201ENST00000552208 EMC9Q9Y3B6 208 aa5.55□□□□□ -1.52
LSM6P2-201ENST00000552208 ARID4BQ4LE39 1312 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms