RNA–Protein interactions for RNA: ENST00000551641.5

RAB3IP-215, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-215ENST00000551641 SLC4A4Q9Y6R1 1079 aa9.29□□□□□ -0.92
RAB3IP-215ENST00000551641 IRS2Q9Y4H2 1338 aa9.29□□□□□ -0.92
RAB3IP-215ENST00000551641 MAGEB6P1A0A0J9YX57 407 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 MINDY4BA8MYZ0 360 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 SMIM22K7EJ46 135 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 TUBB4AP04350 444 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 TOB1P50616 345 aaPredicted RBP9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 GNL2Q13823 731 aaKnown RBP9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 NT5DC1Q5TFE4 455 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 TMC6Q7Z403 805 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 TMTC2Q8N394 836 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 KRI1Q8N9T8 703 aaKnown RBP9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 SUPT20HQ8NEM7 779 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 FEZ1Q99689 392 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 SLC26A6Q9BXS9 759 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 RNF181Q9P0P0 153 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 SAP30BPQ9UHR5 308 aaKnown RBP9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 CHD4Q14839 1912 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 CYP2D7A0A087X1C5 515 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 USP17L3A6NCW0 530 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 USP17L4A6NCW7 530 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 UBE2Q2LH0YL09 131 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 IL1R1P14778 569 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 SFPQP23246 707 aaKnown RBP eCLIP9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 PTPREP23469 700 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 PNOCQ13519 176 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 LONRF3Q496Y0 759 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 CC2D2BQ6DHV5 1058 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 USP17L1Q7RTZ2 530 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 FOXP4Q8IVH2 680 aaPredicted RBP9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 ZNF579Q8NAF0 562 aaKnown RBP9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 NSUN4Q96CB9 384 aaKnown RBP9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 CLIC6Q96NY7 704 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 NACAP1Q9BZK3 213 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 TMX1Q9H3N1 280 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 ANAPC4Q9UJX5 808 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 KCNH3Q9ULD8 1083 aa9.28□□□□□ -0.92
RAB3IP-215ENST00000551641 DEXIO95424 95 aa9.27□□□□□ -0.92
RAB3IP-215ENST00000551641 GUCY1A2P33402 732 aa9.27□□□□□ -0.92
RAB3IP-215ENST00000551641 TDO2P48775 406 aa9.27□□□□□ -0.92
RAB3IP-215ENST00000551641 EVX2Q03828 476 aa9.27□□□□□ -0.92
RAB3IP-215ENST00000551641 RTN1Q16799 776 aa9.27□□□□□ -0.92
RAB3IP-215ENST00000551641 KIF18AQ8NI77 898 aa9.27□□□□□ -0.92
RAB3IP-215ENST00000551641 PPP1R13BQ96KQ4 1090 aa9.27□□□□□ -0.92
RAB3IP-215ENST00000551641 NOL10Q9BSC4 688 aaKnown RBP9.27□□□□□ -0.92
RAB3IP-215ENST00000551641 L2HGDHQ9H9P8 463 aa9.27□□□□□ -0.92
RAB3IP-215ENST00000551641 CGNQ9P2M7 1197 aaKnown RBP9.27□□□□□ -0.92
RAB3IP-215ENST00000551641 FBXO2Q9UK22 296 aaPredicted RBP9.27□□□□□ -0.92
RAB3IP-215ENST00000551641 CCDC196A0A1B0GTZ2 297 aa9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 CLRN2A0PK11 232 aa9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 BTBD18B2RXH4 712 aa9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 CBFA2T2O43439 604 aa9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 ATP1A3P13637 1013 aa9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 LMOD1P29536 600 aaPredicted RBP9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 BTDP43251 543 aa9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 CXCL9Q07325 125 aa9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 TCP10Q12799 353 aa9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 WTAPQ15007 396 aa9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 SART3Q15020 963 aaKnown RBP9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 PPP2R5BQ15173 497 aa9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 RILPL1Q5EBL4 403 aa9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 RRP12Q5JTH9 1297 aaKnown RBP9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 PODNQ7Z5L7 613 aa9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 MAPKAPK5Q8IW41 473 aa9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 DIS3L2Q8IYB7 885 aaKnown RBP9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 CRACR2BQ8N4Y2 399 aaPredicted RBP9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 ZNF526Q8TF50 670 aaPredicted RBP9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 RNF41Q9H4P4 317 aaPredicted RBP9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 SLURP2P0DP57 97 aa9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 BMP6P22004 513 aa9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 USP5P45974 858 aa9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 SARSP49591 514 aaKnown RBP9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 SAFBQ15424 915 aaKnown RBP eCLIP9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 SOGA3Q5TF21 947 aa9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 SPTY2D1Q68D10 685 aaPredicted RBP9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 TRIM22Q8IYM9 498 aa9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 CNNM3Q8NE01 707 aa9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 SH3RF3Q8TEJ3 882 aaPredicted RBP9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 ERO1AQ96HE7 468 aa9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 TRMT1Q9NXH9 659 aaKnown RBP9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 PCDHA5Q9Y5H7 936 aa9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 DUOX1Q9NRD9 1551 aa9.27□□□□□ -0.93
RAB3IP-215ENST00000551641 SEC23AQ15436 765 aa9.26□□□□□ -0.93
RAB3IP-215ENST00000551641 VSTM4Q8IW00 320 aa9.26□□□□□ -0.93
RAB3IP-215ENST00000551641 TGFBRAP1Q8WUH2 860 aa9.26□□□□□ -0.93
RAB3IP-215ENST00000551641 ZNF592Q92610 1267 aa9.26□□□□□ -0.93
RAB3IP-215ENST00000551641 PSMD1Q99460 953 aa9.26□□□□□ -0.93
RAB3IP-215ENST00000551641 ARID3AQ99856 593 aa9.26□□□□□ -0.93
RAB3IP-215ENST00000551641 ZNF215Q9UL58 517 aaPredicted RBP9.26□□□□□ -0.93
RAB3IP-215ENST00000551641 ZNRF3Q9ULT6 936 aa9.26□□□□□ -0.93
RAB3IP-215ENST00000551641 MYH13Q9UKX3 1938 aa9.26□□□□□ -0.93
RAB3IP-215ENST00000551641 SEMA3EO15041 775 aa9.26□□□□□ -0.93
RAB3IP-215ENST00000551641 NRDCO43847 1150 aa9.26□□□□□ -0.93
RAB3IP-215ENST00000551641 ZSCAN20P17040 1043 aaPredicted RBP9.26□□□□□ -0.93
RAB3IP-215ENST00000551641 UBASH3AP57075 661 aa9.26□□□□□ -0.93
RAB3IP-215ENST00000551641 PPARAQ07869 468 aa9.26□□□□□ -0.93
RAB3IP-215ENST00000551641 FANCBQ8NB91 859 aa9.26□□□□□ -0.93
RAB3IP-215ENST00000551641 DPF2Q92785 391 aa9.26□□□□□ -0.93
RAB3IP-215ENST00000551641 RTFDC1Q9BY42 306 aaPredicted RBP9.26□□□□□ -0.93
RAB3IP-215ENST00000551641 VEZTQ9HBM0 779 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms