RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 CCDC39Q9UFE4 941 aa13.24□□□□□ -0.29
RAB5C-208ENST00000551338 MYO3BQ8WXR4 1341 aa13.23□□□□□ -0.29
RAB5C-208ENST00000551338 A0A087WWV3 80 aa13.23□□□□□ -0.29
RAB5C-208ENST00000551338 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.23□□□□□ -0.29
RAB5C-208ENST00000551338 PALM3A6NDB9 673 aaPredicted RBP13.23□□□□□ -0.29
RAB5C-208ENST00000551338 G3V3G9 751 aa13.23□□□□□ -0.29
RAB5C-208ENST00000551338 WNT7AO00755 349 aa13.23□□□□□ -0.29
RAB5C-208ENST00000551338 ADAMTS3O15072 1205 aa13.23□□□□□ -0.29
RAB5C-208ENST00000551338 CAVIN2O95810 425 aa13.23□□□□□ -0.29
RAB5C-208ENST00000551338 CLCN1P35523 988 aa13.23□□□□□ -0.29
RAB5C-208ENST00000551338 CRKP46108 304 aa13.23□□□□□ -0.29
RAB5C-208ENST00000551338 GNAQP50148 359 aa13.23□□□□□ -0.29
RAB5C-208ENST00000551338 GRIN1Q05586 938 aa13.23□□□□□ -0.29
RAB5C-208ENST00000551338 DACT2Q5SW24 774 aa13.23□□□□□ -0.29
RAB5C-208ENST00000551338 DCAF8Q5TAQ9 597 aa13.23□□□□□ -0.29
RAB5C-208ENST00000551338 APOBEC3HQ6NTF7 200 aaKnown RBP13.23□□□□□ -0.29
RAB5C-208ENST00000551338 CDC42EP5Q6NZY7 148 aa13.23□□□□□ -0.29
RAB5C-208ENST00000551338 RASGRP2Q7LDG7 609 aa13.23□□□□□ -0.29
RAB5C-208ENST00000551338 KRI1Q8N9T8 703 aaKnown RBP13.23□□□□□ -0.29
RAB5C-208ENST00000551338 ERCC4Q92889 916 aaPredicted RBP13.23□□□□□ -0.29
RAB5C-208ENST00000551338 TEKT1Q969V4 418 aa13.23□□□□□ -0.29
RAB5C-208ENST00000551338 OSBPL5Q9H0X9 879 aaPredicted RBP13.23□□□□□ -0.29
RAB5C-208ENST00000551338 BRMS1Q9HCU9 246 aa13.23□□□□□ -0.29
RAB5C-208ENST00000551338 USP40Q9NVE5 1235 aa13.23□□□□□ -0.29
RAB5C-208ENST00000551338 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.23□□□□□ -0.29
RAB5C-208ENST00000551338 ZNF219Q9P2Y4 722 aaPredicted RBP13.23□□□□□ -0.29
RAB5C-208ENST00000551338 FER1L6Q2WGJ9 1857 aa13.23□□□□□ -0.29
RAB5C-208ENST00000551338 COL4A5P29400 1685 aa13.22□□□□□ -0.29
RAB5C-208ENST00000551338 IGKV6D-41A0A0C4DH26 115 aa13.22□□□□□ -0.29
RAB5C-208ENST00000551338 CYTH3O43739 400 aa13.22□□□□□ -0.29
RAB5C-208ENST00000551338 SYKP43405 635 aa13.22□□□□□ -0.29
RAB5C-208ENST00000551338 ZNF165P49910 485 aa13.22□□□□□ -0.29
RAB5C-208ENST00000551338 STRIP1Q5VSL9 837 aa13.22□□□□□ -0.29
RAB5C-208ENST00000551338 CEP95Q96GE4 821 aa13.22□□□□□ -0.29
RAB5C-208ENST00000551338 SDF4Q9BRK5 362 aa13.22□□□□□ -0.29
RAB5C-208ENST00000551338 ANO10Q9NW15 660 aa13.22□□□□□ -0.29
RAB5C-208ENST00000551338 NOL7Q9UMY1 257 aaKnown RBP13.22□□□□□ -0.29
RAB5C-208ENST00000551338 STX8Q9UNK0 236 aa13.22□□□□□ -0.29
RAB5C-208ENST00000551338 TRIM75PA6NK02 468 aa13.21□□□□□ -0.29
RAB5C-208ENST00000551338 TOP1P11387 765 aaKnown RBP13.21□□□□□ -0.29
RAB5C-208ENST00000551338 AKR1B1P15121 316 aa13.21□□□□□ -0.29
RAB5C-208ENST00000551338 ATP2B1P20020 1258 aa13.21□□□□□ -0.29
RAB5C-208ENST00000551338 NLRP5P59047 1200 aa13.21□□□□□ -0.29
RAB5C-208ENST00000551338 HDLBPQ00341 1268 aaKnown RBP13.21□□□□□ -0.29
RAB5C-208ENST00000551338 KIAA2012Q0VF49 1180 aa13.21□□□□□ -0.29
RAB5C-208ENST00000551338 AOC3Q16853 763 aa13.21□□□□□ -0.29
RAB5C-208ENST00000551338 TYW1BQ6NUM6 668 aa13.21□□□□□ -0.29
RAB5C-208ENST00000551338 PIBF1Q8WXW3 757 aa13.21□□□□□ -0.29
RAB5C-208ENST00000551338 GPKOWQ92917 476 aaPredicted RBP eCLIP13.21□□□□□ -0.29
RAB5C-208ENST00000551338 ZDHHC15Q96MV8 337 aa13.21□□□□□ -0.29
RAB5C-208ENST00000551338 PDGFDQ9GZP0 370 aaPredicted RBP13.21□□□□□ -0.29
RAB5C-208ENST00000551338 SH3GLB2Q9NR46 395 aa13.21□□□□□ -0.29
RAB5C-208ENST00000551338 KIAA1468Q9P260 1216 aa13.21□□□□□ -0.29
RAB5C-208ENST00000551338 CEP131Q9UPN4 1083 aa13.21□□□□□ -0.29
RAB5C-208ENST00000551338 ZKSCAN5Q9Y2L8 839 aa13.21□□□□□ -0.29
RAB5C-208ENST00000551338 PCDHAC2Q9Y5I4 1007 aa13.21□□□□□ -0.29
RAB5C-208ENST00000551338 SRPRBQ9Y5M8 271 aaKnown RBP13.21□□□□□ -0.29
RAB5C-208ENST00000551338 SHMT1P34896 483 aa13.2□□□□□ -0.3
RAB5C-208ENST00000551338 BAG6P46379 1132 aa13.2□□□□□ -0.3
RAB5C-208ENST00000551338 NFIAQ12857 509 aa13.2□□□□□ -0.3
RAB5C-208ENST00000551338 TTC38Q5R3I4 469 aa13.2□□□□□ -0.3
RAB5C-208ENST00000551338 WWC2Q6AWC2 1192 aa13.2□□□□□ -0.3
RAB5C-208ENST00000551338 CC2D2BQ6DHV5 1058 aa13.2□□□□□ -0.3
RAB5C-208ENST00000551338 KRBA2Q6ZNG9 492 aa13.2□□□□□ -0.3
RAB5C-208ENST00000551338 ZNF579Q8NAF0 562 aaKnown RBP13.2□□□□□ -0.3
RAB5C-208ENST00000551338 DAGLBQ8NCG7 672 aa13.2□□□□□ -0.3
RAB5C-208ENST00000551338 LZTS2Q9BRK4 669 aa13.2□□□□□ -0.3
RAB5C-208ENST00000551338 MRIQ9BWK5 157 aa13.2□□□□□ -0.3
RAB5C-208ENST00000551338 SPZ1Q9BXG8 430 aa13.2□□□□□ -0.3
RAB5C-208ENST00000551338 SWAP70Q9UH65 585 aa13.2□□□□□ -0.3
RAB5C-208ENST00000551338 TUBE1Q9UJT0 475 aa13.2□□□□□ -0.3
RAB5C-208ENST00000551338 MTMR7Q9Y216 660 aa13.2□□□□□ -0.3
RAB5C-208ENST00000551338 COL2A1P02458 1487 aaPredicted RBP13.19□□□□□ -0.3
RAB5C-208ENST00000551338 STXBP3O00186 592 aa13.19□□□□□ -0.3
RAB5C-208ENST00000551338 BMP15O95972 392 aa13.19□□□□□ -0.3
RAB5C-208ENST00000551338 PTMAP06454 111 aaKnown RBP13.19□□□□□ -0.3
RAB5C-208ENST00000551338 GOLGA8HP0CJ92 632 aa13.19□□□□□ -0.3
RAB5C-208ENST00000551338 CALML3P27482 149 aa13.19□□□□□ -0.3
RAB5C-208ENST00000551338 NLRP12P59046 1061 aa13.19□□□□□ -0.3
RAB5C-208ENST00000551338 PLCB2Q00722 1185 aa13.19□□□□□ -0.3
RAB5C-208ENST00000551338 SPECC1Q5M775 1068 aa13.19□□□□□ -0.3
RAB5C-208ENST00000551338 DEFB132Q7Z7B7 95 aa13.19□□□□□ -0.3
RAB5C-208ENST00000551338 METTL16Q86W50 562 aaKnown RBP13.19□□□□□ -0.3
RAB5C-208ENST00000551338 KIAA0825Q8IV33 1275 aa13.19□□□□□ -0.3
RAB5C-208ENST00000551338 DHX40Q8IX18 779 aaKnown RBP13.19□□□□□ -0.3
RAB5C-208ENST00000551338 CEP57L1Q8IYX8 460 aa13.19□□□□□ -0.3
RAB5C-208ENST00000551338 BLIDQ8IZY5 108 aa13.19□□□□□ -0.3
RAB5C-208ENST00000551338 SUPT20HQ8NEM7 779 aa13.19□□□□□ -0.3
RAB5C-208ENST00000551338 EHD4Q9H223 541 aa13.19□□□□□ -0.3
RAB5C-208ENST00000551338 CPVLQ9H3G5 476 aa13.19□□□□□ -0.3
RAB5C-208ENST00000551338 SERPINB13Q9UIV8 391 aa13.19□□□□□ -0.3
RAB5C-208ENST00000551338 KCNH3Q9ULD8 1083 aa13.19□□□□□ -0.3
RAB5C-208ENST00000551338 MYH7BA7E2Y1 1941 aa13.19□□□□□ -0.3
RAB5C-208ENST00000551338 ATAD5Q96QE3 1844 aa13.18□□□□□ -0.3
RAB5C-208ENST00000551338 YDJCA8MPS7 323 aa13.18□□□□□ -0.3
RAB5C-208ENST00000551338 KLRF2D3W0D1 207 aa13.18□□□□□ -0.3
RAB5C-208ENST00000551338 M0R2N6 131 aa13.18□□□□□ -0.3
RAB5C-208ENST00000551338 HLA-DOAP06340 250 aa13.18□□□□□ -0.3
RAB5C-208ENST00000551338 PARP1P09874 1014 aaKnown RBP13.18□□□□□ -0.3
RAB5C-208ENST00000551338 MSNP26038 577 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms