RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 PGAP2Q9UHJ9 254 aa16.48■□□□□ 0.23
LETMD1-229ENST00000551261 PALM3A6NDB9 673 aaPredicted RBP16.47■□□□□ 0.23
LETMD1-229ENST00000551261 ASNSP08243 561 aa16.47■□□□□ 0.23
LETMD1-229ENST00000551261 KRT85P78386 507 aa16.47■□□□□ 0.23
LETMD1-229ENST00000551261 FUT2Q10981 343 aa16.47■□□□□ 0.23
LETMD1-229ENST00000551261 SAMD7Q7Z3H4 446 aa16.47■□□□□ 0.23
LETMD1-229ENST00000551261 TMEM87AQ8NBN3 555 aa16.47■□□□□ 0.23
LETMD1-229ENST00000551261 GMCL1P1Q8NEA9 526 aa16.47■□□□□ 0.23
LETMD1-229ENST00000551261 DCAF4Q8WV16 495 aa16.47■□□□□ 0.23
LETMD1-229ENST00000551261 ANP32EQ9BTT0 268 aa16.47■□□□□ 0.23
LETMD1-229ENST00000551261 TMEM39BQ9GZU3 492 aa16.47■□□□□ 0.23
LETMD1-229ENST00000551261 SCN4AP35499 1836 aa16.47■□□□□ 0.23
LETMD1-229ENST00000551261 IQCA1LA6NCM1 817 aa16.46■□□□□ 0.23
LETMD1-229ENST00000551261 USP50Q70EL3 339 aaPredicted RBP16.46■□□□□ 0.23
LETMD1-229ENST00000551261 ZC3H15Q8WU90 426 aaKnown RBP16.46■□□□□ 0.23
LETMD1-229ENST00000551261 PHKBQ93100 1093 aa16.46■□□□□ 0.23
LETMD1-229ENST00000551261 TEPSINQ96N21 525 aa16.46■□□□□ 0.23
LETMD1-229ENST00000551261 SCAND2PQ9GZW5 306 aaPredicted RBP16.46■□□□□ 0.23
LETMD1-229ENST00000551261 DEFB129Q9H1M3 183 aa16.46■□□□□ 0.23
LETMD1-229ENST00000551261 BRMS1Q9HCU9 246 aa16.46■□□□□ 0.23
LETMD1-229ENST00000551261 SH3GLB2Q9NR46 395 aa16.46■□□□□ 0.23
LETMD1-229ENST00000551261 CLIP2Q9UDT6 1046 aa16.46■□□□□ 0.23
LETMD1-229ENST00000551261 MAD2L2Q9UI95 211 aa16.46■□□□□ 0.23
LETMD1-229ENST00000551261 CFAP45Q9UL16 551 aa16.46■□□□□ 0.23
LETMD1-229ENST00000551261 GOLGB1Q14789 3259 aaKnown RBP16.46■□□□□ 0.22
LETMD1-229ENST00000551261 MYH6P13533 1939 aa16.45■□□□□ 0.22
LETMD1-229ENST00000551261 MYH4Q9Y623 1939 aa16.45■□□□□ 0.22
LETMD1-229ENST00000551261 PDHBP11177 359 aa16.45■□□□□ 0.22
LETMD1-229ENST00000551261 RESTQ13127 1097 aa16.45■□□□□ 0.22
LETMD1-229ENST00000551261 CCDC148Q8NFR7 591 aa16.45■□□□□ 0.22
LETMD1-229ENST00000551261 CCDC12Q8WUD4 166 aaPredicted RBP16.45■□□□□ 0.22
LETMD1-229ENST00000551261 GMCL1Q96IK5 515 aa16.45■□□□□ 0.22
LETMD1-229ENST00000551261 ZNF396Q96N95 335 aaPredicted RBP16.45■□□□□ 0.22
LETMD1-229ENST00000551261 ZBTB21Q9ULJ3 1066 aa16.45■□□□□ 0.22
LETMD1-229ENST00000551261 ELP1O95163 1332 aa16.45■□□□□ 0.22
LETMD1-229ENST00000551261 SHTN1A0MZ66 631 aa16.44■□□□□ 0.22
LETMD1-229ENST00000551261 KLRF2D3W0D1 207 aa16.44■□□□□ 0.22
LETMD1-229ENST00000551261 PLEKHA8P1O95397 391 aa16.44■□□□□ 0.22
LETMD1-229ENST00000551261 EGFRP00533 1210 aa16.44■□□□□ 0.22
LETMD1-229ENST00000551261 GH2P01242 217 aa16.44■□□□□ 0.22
LETMD1-229ENST00000551261 CAP2P40123 477 aa16.44■□□□□ 0.22
LETMD1-229ENST00000551261 PFKFB3Q16875 520 aaPredicted RBP16.44■□□□□ 0.22
LETMD1-229ENST00000551261 SUPT20HL1Q3ZLR7 823 aa16.44■□□□□ 0.22
LETMD1-229ENST00000551261 ANGEL2Q5VTE6 544 aaKnown RBP16.44■□□□□ 0.22
LETMD1-229ENST00000551261 GALNT17Q6IS24 598 aa16.44■□□□□ 0.22
LETMD1-229ENST00000551261 ZNF341Q9BYN7 854 aa16.44■□□□□ 0.22
LETMD1-229ENST00000551261 GGA3Q9NZ52 723 aa16.44■□□□□ 0.22
LETMD1-229ENST00000551261 MYH15Q9Y2K3 1946 aa16.43■□□□□ 0.22
LETMD1-229ENST00000551261 WDR90Q96KV7 1748 aa16.43■□□□□ 0.22
LETMD1-229ENST00000551261 GLTPD2A6NH11 291 aa16.43■□□□□ 0.22
LETMD1-229ENST00000551261 CTNND1O60716 968 aaKnown RBP16.43■□□□□ 0.22
LETMD1-229ENST00000551261 DDNO94850 711 aaPredicted RBP16.43■□□□□ 0.22
LETMD1-229ENST00000551261 MBD3O95983 291 aa16.43■□□□□ 0.22
LETMD1-229ENST00000551261 MMP1P03956 469 aa16.43■□□□□ 0.22
LETMD1-229ENST00000551261 SCG2P13521 617 aa16.43■□□□□ 0.22
LETMD1-229ENST00000551261 EEF2P13639 858 aaKnown RBP16.43■□□□□ 0.22
LETMD1-229ENST00000551261 CALML3P27482 149 aa16.43■□□□□ 0.22
LETMD1-229ENST00000551261 ZNF543Q08ER8 600 aa16.43■□□□□ 0.22
LETMD1-229ENST00000551261 GNL2Q13823 731 aaKnown RBP16.43■□□□□ 0.22
LETMD1-229ENST00000551261 SEPT2Q15019 361 aa16.43■□□□□ 0.22
LETMD1-229ENST00000551261 KRT40Q6A162 431 aa16.43■□□□□ 0.22
LETMD1-229ENST00000551261 MCTP1Q6DN14 999 aa16.43■□□□□ 0.22
LETMD1-229ENST00000551261 TEX2Q8IWB9 1127 aa16.43■□□□□ 0.22
LETMD1-229ENST00000551261 SRBD1Q8N5C6 995 aaKnown RBP16.43■□□□□ 0.22
LETMD1-229ENST00000551261 TRPM4Q8TD43 1214 aa16.43■□□□□ 0.22
LETMD1-229ENST00000551261 FOXP1Q9H334 677 aaPredicted RBP16.43■□□□□ 0.22
LETMD1-229ENST00000551261 GOPCQ9HD26 462 aa16.43■□□□□ 0.22
LETMD1-229ENST00000551261 SEC63Q9UGP8 760 aaKnown RBP16.43■□□□□ 0.22
LETMD1-229ENST00000551261 FAM196BA6NMK8 535 aa16.42■□□□□ 0.22
LETMD1-229ENST00000551261 GDF11O95390 407 aa16.42■□□□□ 0.22
LETMD1-229ENST00000551261 NCLP19338 710 aaKnown RBP16.42■□□□□ 0.22
LETMD1-229ENST00000551261 U2AF2P26368 475 aaKnown RBP eCLIP16.42■□□□□ 0.22
LETMD1-229ENST00000551261 EPS15P42566 896 aa16.42■□□□□ 0.22
LETMD1-229ENST00000551261 KIF23Q02241 960 aaPredicted RBP16.42■□□□□ 0.22
LETMD1-229ENST00000551261 TRAF1Q13077 416 aa16.42■□□□□ 0.22
LETMD1-229ENST00000551261 PPP1R18Q6NYC8 613 aa16.42■□□□□ 0.22
LETMD1-229ENST00000551261 PNMA8AQ86V59 439 aaPredicted RBP16.42■□□□□ 0.22
LETMD1-229ENST00000551261 LRRC47Q8N1G4 583 aaKnown RBP16.42■□□□□ 0.22
LETMD1-229ENST00000551261 DCPSQ96C86 337 aaKnown RBP16.42■□□□□ 0.22
LETMD1-229ENST00000551261 RRP36Q96EU6 259 aaKnown RBP16.42■□□□□ 0.22
LETMD1-229ENST00000551261 DOCK1Q14185 1865 aa16.42■□□□□ 0.22
LETMD1-229ENST00000551261 GUCY1A2P33402 732 aa16.41■□□□□ 0.22
LETMD1-229ENST00000551261 PKN1Q16512 942 aa16.41■□□□□ 0.22
LETMD1-229ENST00000551261 USP48Q86UV5 1035 aa16.41■□□□□ 0.22
LETMD1-229ENST00000551261 SULF1Q8IWU6 871 aa16.41■□□□□ 0.22
LETMD1-229ENST00000551261 RIOX1Q9H6W3 641 aa16.41■□□□□ 0.22
LETMD1-229ENST00000551261 TMX2Q9Y320 296 aa16.41■□□□□ 0.22
LETMD1-229ENST00000551261 V9GY48 417 aaPredicted RBP16.41■□□□□ 0.22
LETMD1-229ENST00000551261 ATAD5Q96QE3 1844 aa16.4■□□□□ 0.22
LETMD1-229ENST00000551261 PHF20L1A8MW92 1017 aa16.4■□□□□ 0.22
LETMD1-229ENST00000551261 SLC1A4P43007 532 aa16.4■□□□□ 0.22
LETMD1-229ENST00000551261 ATP2B2Q01814 1243 aa16.4■□□□□ 0.22
LETMD1-229ENST00000551261 FOXD4L5Q5VV16 416 aaPredicted RBP16.4■□□□□ 0.22
LETMD1-229ENST00000551261 SLFN13Q68D06 897 aa16.4■□□□□ 0.22
LETMD1-229ENST00000551261 FERMT3Q86UX7 667 aa16.4■□□□□ 0.22
LETMD1-229ENST00000551261 FOXD4L4Q8WXT5 416 aaPredicted RBP16.4■□□□□ 0.22
LETMD1-229ENST00000551261 PHF20Q9BVI0 1012 aa16.4■□□□□ 0.22
LETMD1-229ENST00000551261 ZNF112Q9UJU3 913 aa16.4■□□□□ 0.22
LETMD1-229ENST00000551261 ESYT2A0FGR8 921 aa16.39■□□□□ 0.21
LETMD1-229ENST00000551261 USP17L5A8MUK1 530 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms