RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	NKX2-4	Q9H2Z4	354 aa		7.58	□□□□□ -1.2
RACGAP1-223	ENST00000551260	PICK1	Q9NRD5	415 aa		7.58	□□□□□ -1.2
RACGAP1-223	ENST00000551260	BABAM1	Q9NWV8	329 aa		7.58	□□□□□ -1.2
RACGAP1-223	ENST00000551260	DDX20	Q9UHI6	824 aa	Known RBP	7.58	□□□□□ -1.2
RACGAP1-223	ENST00000551260	SALL2	Q9Y467	1007 aa	Predicted RBP	7.58	□□□□□ -1.2
RACGAP1-223	ENST00000551260	KMT2B	Q9UMN6	2715 aa	Predicted RBP	7.58	□□□□□ -1.2
RACGAP1-223	ENST00000551260	DCHS1	Q96JQ0	3298 aa		7.58	□□□□□ -1.2
RACGAP1-223	ENST00000551260	RNF223	E7ERA6	249 aa		7.57	□□□□□ -1.2
RACGAP1-223	ENST00000551260	CHL1	O00533	1208 aa		7.57	□□□□□ -1.2
RACGAP1-223	ENST00000551260	ERC2	O15083	957 aa		7.57	□□□□□ -1.2
RACGAP1-223	ENST00000551260	KRT37	O76014	449 aa		7.57	□□□□□ -1.2
RACGAP1-223	ENST00000551260	S1PR4	O95977	384 aa		7.57	□□□□□ -1.2
RACGAP1-223	ENST00000551260	GCLC	P48506	637 aa	Predicted RBP	7.57	□□□□□ -1.2
RACGAP1-223	ENST00000551260	FPGS	Q05932	587 aa		7.57	□□□□□ -1.2
RACGAP1-223	ENST00000551260	SNX17	Q15036	470 aa		7.57	□□□□□ -1.2
RACGAP1-223	ENST00000551260	DUSP27	Q5VZP5	1158 aa		7.57	□□□□□ -1.2
RACGAP1-223	ENST00000551260	RNF19B	Q6ZMZ0	732 aa		7.57	□□□□□ -1.2
RACGAP1-223	ENST00000551260	TRPV1	Q8NER1	839 aa		7.57	□□□□□ -1.2
RACGAP1-223	ENST00000551260	LPAR1	Q92633	364 aa		7.57	□□□□□ -1.2
RACGAP1-223	ENST00000551260	TXNRD2	Q9NNW7	524 aa		7.57	□□□□□ -1.2
RACGAP1-223	ENST00000551260	MAP3K2	Q9Y2U5	619 aa		7.57	□□□□□ -1.2
RACGAP1-223	ENST00000551260	SCN5A	Q14524	2016 aa		7.57	□□□□□ -1.2
RACGAP1-223	ENST00000551260	ATRNL1	Q5VV63	1379 aa		7.57	□□□□□ -1.2
RACGAP1-223	ENST00000551260	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	7.57	□□□□□ -1.2
RACGAP1-223	ENST00000551260	PTPRS	Q13332	1948 aa		7.56	□□□□□ -1.2
RACGAP1-223	ENST00000551260	MAPK8IP3	Q9UPT6	1336 aa		7.56	□□□□□ -1.2
RACGAP1-223	ENST00000551260		H7C1W4	665 aa		7.56	□□□□□ -1.2
RACGAP1-223	ENST00000551260	RFXAP	O00287	272 aa		7.56	□□□□□ -1.2
RACGAP1-223	ENST00000551260	RAG1	P15918	1043 aa		7.56	□□□□□ -1.2
RACGAP1-223	ENST00000551260	HIBADH	P31937	336 aa	Known RBP	7.56	□□□□□ -1.2
RACGAP1-223	ENST00000551260	ADCYAP1R1	P41586	468 aa		7.56	□□□□□ -1.2
RACGAP1-223	ENST00000551260	HDLBP	Q00341	1268 aa	Known RBP	7.56	□□□□□ -1.2
RACGAP1-223	ENST00000551260	GUCA2A	Q02747	115 aa		7.56	□□□□□ -1.2
RACGAP1-223	ENST00000551260	KRT40	Q6A162	431 aa		7.56	□□□□□ -1.2
RACGAP1-223	ENST00000551260	FAM160A2	Q8N612	972 aa	Predicted RBP	7.56	□□□□□ -1.2
RACGAP1-223	ENST00000551260	SPIRE2	Q8WWL2	714 aa		7.56	□□□□□ -1.2
RACGAP1-223	ENST00000551260	SOCS4	Q8WXH5	440 aa		7.56	□□□□□ -1.2
RACGAP1-223	ENST00000551260	ZNF594	Q96JF6	807 aa	Predicted RBP	7.56	□□□□□ -1.2
RACGAP1-223	ENST00000551260	FAM84B	Q96KN1	310 aa	Predicted RBP	7.56	□□□□□ -1.2
RACGAP1-223	ENST00000551260	PORCN	Q9H237	461 aa		7.56	□□□□□ -1.2
RACGAP1-223	ENST00000551260	YBX2	Q9Y2T7	364 aa	Known RBP	7.56	□□□□□ -1.2
RACGAP1-223	ENST00000551260	NDUFB9	Q9Y6M9	179 aa		7.56	□□□□□ -1.2
RACGAP1-223	ENST00000551260	SIPA1L1	O43166	1804 aa		7.56	□□□□□ -1.2
RACGAP1-223	ENST00000551260	ANKRD18B	A2A2Z9	1011 aa		7.55	□□□□□ -1.2
RACGAP1-223	ENST00000551260	CSF1R	P07333	972 aa		7.55	□□□□□ -1.2
RACGAP1-223	ENST00000551260	CLTB	P09497	229 aa		7.55	□□□□□ -1.2
RACGAP1-223	ENST00000551260	HOXB7	P09629	217 aa		7.55	□□□□□ -1.2
RACGAP1-223	ENST00000551260	GGCX	P38435	758 aa		7.55	□□□□□ -1.2
RACGAP1-223	ENST00000551260	RGS2	P41220	211 aa		7.55	□□□□□ -1.2
RACGAP1-223	ENST00000551260	HMGCS2	P54868	508 aa		7.55	□□□□□ -1.2
RACGAP1-223	ENST00000551260	FOXK2	Q01167	660 aa		7.55	□□□□□ -1.2
RACGAP1-223	ENST00000551260		Q3C1V9	767 aa		7.55	□□□□□ -1.2
RACGAP1-223	ENST00000551260	CDC42EP5	Q6NZY7	148 aa		7.55	□□□□□ -1.2
RACGAP1-223	ENST00000551260	C16orf59	Q7L2K0	433 aa		7.55	□□□□□ -1.2
RACGAP1-223	ENST00000551260	TRMT44	Q8IYL2	757 aa	Known RBP	7.55	□□□□□ -1.2
RACGAP1-223	ENST00000551260	APBA2	Q99767	749 aa		7.55	□□□□□ -1.2
RACGAP1-223	ENST00000551260	SLC6A16	Q9GZN6	736 aa		7.55	□□□□□ -1.2
RACGAP1-223	ENST00000551260	MORF4L1	Q9UBU8	362 aa		7.55	□□□□□ -1.2
RACGAP1-223	ENST00000551260	CACNA1F	O60840	1977 aa		7.55	□□□□□ -1.2
RACGAP1-223	ENST00000551260	PTPRZ1	P23471	2315 aa	Predicted RBP	7.54	□□□□□ -1.2
RACGAP1-223	ENST00000551260	MCM3AP	O60318	1980 aa		7.54	□□□□□ -1.2
RACGAP1-223	ENST00000551260	NEURL1B	A8MQ27	555 aa		7.54	□□□□□ -1.2
RACGAP1-223	ENST00000551260	KBTBD13	C9JR72	458 aa		7.54	□□□□□ -1.2
RACGAP1-223	ENST00000551260	ELL2	O00472	640 aa	Predicted RBP	7.54	□□□□□ -1.2
RACGAP1-223	ENST00000551260	KIAA0355	O15063	1070 aa		7.54	□□□□□ -1.2
RACGAP1-223	ENST00000551260	ACR	P10323	421 aa		7.54	□□□□□ -1.2
RACGAP1-223	ENST00000551260	MYOG	P15173	224 aa		7.54	□□□□□ -1.2
RACGAP1-223	ENST00000551260	CYP2C19	P33261	490 aa		7.54	□□□□□ -1.2
RACGAP1-223	ENST00000551260	CASP7	P55210	303 aa		7.54	□□□□□ -1.2
RACGAP1-223	ENST00000551260	SPP2	Q13103	211 aa		7.54	□□□□□ -1.2
RACGAP1-223	ENST00000551260	CSPP1	Q1MSJ5	1256 aa		7.54	□□□□□ -1.2
RACGAP1-223	ENST00000551260	TMEM240	Q5SV17	173 aa		7.54	□□□□□ -1.2
RACGAP1-223	ENST00000551260	SH3BP5L	Q7L8J4	393 aa		7.54	□□□□□ -1.2
RACGAP1-223	ENST00000551260	GPR142	Q7Z601	462 aa		7.54	□□□□□ -1.2
RACGAP1-223	ENST00000551260	PROCA1	Q8NCQ7	364 aa	Predicted RBP	7.54	□□□□□ -1.2
RACGAP1-223	ENST00000551260	EMID1	Q96A84	441 aa	Predicted RBP	7.54	□□□□□ -1.2
RACGAP1-223	ENST00000551260	TACC3	Q9Y6A5	838 aa		7.54	□□□□□ -1.2
RACGAP1-223	ENST00000551260	WDR87	Q6ZQQ6	2873 aa		7.54	□□□□□ -1.2
RACGAP1-223	ENST00000551260	ZNF236	Q9UL36	1845 aa		7.54	□□□□□ -1.2
RACGAP1-223	ENST00000551260	UTY	O14607	1347 aa		7.53	□□□□□ -1.2
RACGAP1-223	ENST00000551260	TECTA	O75443	2155 aa		7.53	□□□□□ -1.2
RACGAP1-223	ENST00000551260	COL11A1	P12107	1806 aa	Predicted RBP	7.53	□□□□□ -1.2
RACGAP1-223	ENST00000551260	PI4KAP2	A4QPH2	592 aa		7.53	□□□□□ -1.2
RACGAP1-223	ENST00000551260	MOXD2P	A6NHM9	499 aa		7.53	□□□□□ -1.2
RACGAP1-223	ENST00000551260	FAM196B	A6NMK8	535 aa		7.53	□□□□□ -1.2
RACGAP1-223	ENST00000551260	PQBP1	O60828	265 aa	Known RBP	7.53	□□□□□ -1.2
RACGAP1-223	ENST00000551260	TMPO	P42166	694 aa	Known RBP	7.53	□□□□□ -1.2
RACGAP1-223	ENST00000551260	RABGGTB	P53611	331 aa		7.53	□□□□□ -1.2
RACGAP1-223	ENST00000551260	NEUROD2	Q15784	382 aa		7.53	□□□□□ -1.2
RACGAP1-223	ENST00000551260	RASIP1	Q5U651	963 aa		7.53	□□□□□ -1.2
RACGAP1-223	ENST00000551260	MFSD14C	Q5VZR4	134 aa		7.53	□□□□□ -1.2
RACGAP1-223	ENST00000551260	PI4KAP1	Q8N8J0	262 aa		7.53	□□□□□ -1.2
RACGAP1-223	ENST00000551260	GPRC5A	Q8NFJ5	357 aa		7.53	□□□□□ -1.2
RACGAP1-223	ENST00000551260	NPLOC4	Q8TAT6	608 aa		7.53	□□□□□ -1.2
RACGAP1-223	ENST00000551260	HERVK_113	Q902F9	699 aa		7.53	□□□□□ -1.2
RACGAP1-223	ENST00000551260	PLA2G12B	Q9BX93	195 aa		7.53	□□□□□ -1.2
RACGAP1-223	ENST00000551260	SLC28A3	Q9HAS3	691 aa		7.53	□□□□□ -1.2
RACGAP1-223	ENST00000551260	PRDM9	Q9NQV7	894 aa		7.53	□□□□□ -1.2
RACGAP1-223	ENST00000551260	TMEM39A	Q9NV64	488 aa		7.53	□□□□□ -1.2
RACGAP1-223	ENST00000551260	RBPJL	Q9UBG7	517 aa		7.53	□□□□□ -1.2

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