RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 TCEA2Q15560 299 aa7.41□□□□□ -1.22
CPSF6-206ENST00000550987 ZYXQ15942 572 aaKnown RBP7.41□□□□□ -1.22
CPSF6-206ENST00000550987 DUOXA2Q1HG44 320 aa7.41□□□□□ -1.22
CPSF6-206ENST00000550987 PPM1JQ5JR12 505 aa7.41□□□□□ -1.22
CPSF6-206ENST00000550987 TMEM201Q5SNT2 666 aa7.41□□□□□ -1.22
CPSF6-206ENST00000550987 CDCP2Q5VXM1 449 aa7.41□□□□□ -1.22
CPSF6-206ENST00000550987 DNAJC5GQ8N7S2 189 aa7.41□□□□□ -1.22
CPSF6-206ENST00000550987 WDR18Q9BV38 432 aa7.41□□□□□ -1.22
CPSF6-206ENST00000550987 TMEM260Q9NX78 707 aa7.41□□□□□ -1.22
CPSF6-206ENST00000550987 IQCA1LA6NCM1 817 aa7.4□□□□□ -1.22
CPSF6-206ENST00000550987 UPK3BL1B0FP48 263 aa7.4□□□□□ -1.22
CPSF6-206ENST00000550987 UPK3BL2E5RIL1 263 aa7.4□□□□□ -1.22
CPSF6-206ENST00000550987 AGRPO00253 132 aa7.4□□□□□ -1.22
CPSF6-206ENST00000550987 ACRP10323 421 aa7.4□□□□□ -1.22
CPSF6-206ENST00000550987 SQSTM1Q13501 440 aa7.4□□□□□ -1.22
CPSF6-206ENST00000550987 C1orf229Q6ZS94 237 aaPredicted RBP7.4□□□□□ -1.22
CPSF6-206ENST00000550987 ZNF507Q8TCN5 953 aa7.4□□□□□ -1.22
CPSF6-206ENST00000550987 ZNF669Q96BR6 464 aaPredicted RBP7.4□□□□□ -1.22
CPSF6-206ENST00000550987 SSU72Q9NP77 194 aaKnown RBP7.4□□□□□ -1.22
CPSF6-206ENST00000550987 LTBP3Q9NS15 1303 aa7.4□□□□□ -1.22
CPSF6-206ENST00000550987 DENND4BO75064 1496 aaPredicted RBP7.4□□□□□ -1.22
CPSF6-206ENST00000550987 ABCA9Q8IUA7 1624 aa7.4□□□□□ -1.22
CPSF6-206ENST00000550987 NPATQ14207 1427 aa7.39□□□□□ -1.23
CPSF6-206ENST00000550987 FGD6Q6ZV73 1430 aa7.39□□□□□ -1.23
CPSF6-206ENST00000550987 DLL1O00548 723 aa7.39□□□□□ -1.23
CPSF6-206ENST00000550987 TNFRSF10CO14798 259 aa7.39□□□□□ -1.23
CPSF6-206ENST00000550987 FANCGO15287 622 aa7.39□□□□□ -1.23
CPSF6-206ENST00000550987 ASMTLO95671 621 aa7.39□□□□□ -1.23
CPSF6-206ENST00000550987 GBP1P32455 592 aa7.39□□□□□ -1.23
CPSF6-206ENST00000550987 ERVK-24P63145 666 aa7.39□□□□□ -1.23
CPSF6-206ENST00000550987 BBS9Q3SYG4 887 aa7.39□□□□□ -1.23
CPSF6-206ENST00000550987 NUTM2GQ5VZR2 741 aa7.39□□□□□ -1.23
CPSF6-206ENST00000550987 HID1Q8IV36 788 aa7.39□□□□□ -1.23
CPSF6-206ENST00000550987 ZSWIM2Q8NEG5 633 aa7.39□□□□□ -1.23
CPSF6-206ENST00000550987 IPO9Q96P70 1041 aaKnown RBP7.39□□□□□ -1.23
CPSF6-206ENST00000550987 FEZ1Q99689 392 aa7.39□□□□□ -1.23
CPSF6-206ENST00000550987 SPATA9Q9BWV2 254 aa7.39□□□□□ -1.23
CPSF6-206ENST00000550987 BRINP2Q9C0B6 783 aa7.39□□□□□ -1.23
CPSF6-206ENST00000550987 PTCH2Q9Y6C5 1203 aa7.39□□□□□ -1.23
CPSF6-206ENST00000550987 MAGI2Q86UL8 1455 aa7.38□□□□□ -1.23
CPSF6-206ENST00000550987 C9orf84Q5VXU9 1444 aa7.38□□□□□ -1.23
CPSF6-206ENST00000550987 OIP5O43482 229 aa7.38□□□□□ -1.23
CPSF6-206ENST00000550987 DNAJA2O60884 412 aa7.38□□□□□ -1.23
CPSF6-206ENST00000550987 DLGAP3O95886 979 aa7.38□□□□□ -1.23
CPSF6-206ENST00000550987 BCRP11274 1271 aa7.38□□□□□ -1.23
CPSF6-206ENST00000550987 SV2CQ496J9 727 aa7.38□□□□□ -1.23
CPSF6-206ENST00000550987 MRM1Q6IN84 353 aaKnown RBP7.38□□□□□ -1.23
CPSF6-206ENST00000550987 MCATQ8IVS2 390 aaKnown RBP7.38□□□□□ -1.23
CPSF6-206ENST00000550987 LRRC47Q8N1G4 583 aaKnown RBP7.38□□□□□ -1.23
CPSF6-206ENST00000550987 ACSF2Q96CM8 615 aaPredicted RBP7.38□□□□□ -1.23
CPSF6-206ENST00000550987 EPN3Q9H201 632 aa7.38□□□□□ -1.23
CPSF6-206ENST00000550987 RRAGCQ9HB90 399 aa7.38□□□□□ -1.23
CPSF6-206ENST00000550987 PCDH12Q9NPG4 1184 aa7.38□□□□□ -1.23
CPSF6-206ENST00000550987 PRDM6Q9NQX0 595 aa7.38□□□□□ -1.23
CPSF6-206ENST00000550987 FAM86C1Q9NVL1 165 aa7.38□□□□□ -1.23
CPSF6-206ENST00000550987 SUSD5O60279 629 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 RNGTTO60942 597 aaKnown RBP7.37□□□□□ -1.23
CPSF6-206ENST00000550987 ADAM11O75078 769 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 FAM153BP0C7A2 387 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 NAT2P11245 290 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 POLR2BP30876 1174 aaKnown RBP7.37□□□□□ -1.23
CPSF6-206ENST00000550987 CCNFP41002 786 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 RAC1P63000 192 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 ZBTB37Q5TC79 503 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 SLC6A19Q695T7 634 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 KIAA0907Q7Z7F0 614 aaPredicted RBP7.37□□□□□ -1.23
CPSF6-206ENST00000550987 SYNPOQ8N3V7 929 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 DTWD1Q8N5C7 304 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 KCT2Q8NC54 265 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 UBASH3BQ8TF42 649 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 IRF7Q92985 503 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 PPP1R14AQ96A00 147 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 TMEM87BQ96K49 555 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 CCDC74BQ96LY2 380 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 SLC26A8Q96RN1 970 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 KIF2CQ99661 725 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 RUSC1Q9BVN2 902 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 ATXN3LQ9H3M9 355 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 PIDD1Q9HB75 910 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 CYP4F12Q9HCS2 524 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 KCNK4Q9NYG8 393 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 LRP2BPQ9P2M1 347 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 TJP2Q9UDY2 1190 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 ZNF214Q9UL59 606 aaPredicted RBP7.37□□□□□ -1.23
CPSF6-206ENST00000550987 AP4E1Q9UPM8 1137 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 ERICH3Q5RHP9 1530 aa7.37□□□□□ -1.23
CPSF6-206ENST00000550987 TERTO14746 1132 aaKnown RBP7.36□□□□□ -1.23
CPSF6-206ENST00000550987 RAB11FIP3O75154 756 aa7.36□□□□□ -1.23
CPSF6-206ENST00000550987 TP53P04637 393 aaPredicted RBP7.36□□□□□ -1.23
CPSF6-206ENST00000550987 VSIG8P0DPA2 414 aa7.36□□□□□ -1.23
CPSF6-206ENST00000550987 FOXD4L6Q3SYB3 417 aaPredicted RBP7.36□□□□□ -1.23
CPSF6-206ENST00000550987 FOXD4L3Q6VB84 417 aaPredicted RBP7.36□□□□□ -1.23
CPSF6-206ENST00000550987 C12orf50Q8NA57 414 aaPredicted RBP7.36□□□□□ -1.23
CPSF6-206ENST00000550987 RNF214Q8ND24 703 aa7.36□□□□□ -1.23
CPSF6-206ENST00000550987 CDC6Q99741 560 aa7.36□□□□□ -1.23
CPSF6-206ENST00000550987 APBA2Q99767 749 aa7.36□□□□□ -1.23
CPSF6-206ENST00000550987 PPP1R9AQ9ULJ8 1098 aa7.36□□□□□ -1.23
CPSF6-206ENST00000550987 HECW1Q76N89 1606 aa7.36□□□□□ -1.23
CPSF6-206ENST00000550987 CACNA1AO00555 2505 aa7.36□□□□□ -1.23
CPSF6-206ENST00000550987 SYNGAP1Q96PV0 1343 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms