RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 NEMFO60524 1076 aa5.05□□□□□ -1.6
CCDC59-204ENST00000550589 JAK2O60674 1132 aa5.05□□□□□ -1.6
CCDC59-204ENST00000550589 YEATS4O95619 227 aa5.05□□□□□ -1.6
CCDC59-204ENST00000550589 GTF2E1P29083 439 aaPredicted RBP5.05□□□□□ -1.6
CCDC59-204ENST00000550589 ZNF165P49910 485 aa5.05□□□□□ -1.6
CCDC59-204ENST00000550589 METAP2P50579 478 aaKnown RBP eCLIP5.05□□□□□ -1.6
CCDC59-204ENST00000550589 RCAN1P53805 252 aa5.05□□□□□ -1.6
CCDC59-204ENST00000550589 EIF5P55010 431 aaKnown RBP5.05□□□□□ -1.6
CCDC59-204ENST00000550589 ERVK-9P63128 1117 aa5.05□□□□□ -1.6
CCDC59-204ENST00000550589 FAM160A1Q05DH4 1040 aa5.05□□□□□ -1.6
CCDC59-204ENST00000550589 TYRO3Q06418 890 aa5.05□□□□□ -1.6
CCDC59-204ENST00000550589 ST3GAL1Q11201 340 aa5.05□□□□□ -1.6
CCDC59-204ENST00000550589 RESTQ13127 1097 aa5.05□□□□□ -1.6
CCDC59-204ENST00000550589 STK38Q15208 465 aa5.05□□□□□ -1.6
CCDC59-204ENST00000550589 ALX1Q15699 326 aa5.05□□□□□ -1.6
CCDC59-204ENST00000550589 HLFQ16534 295 aa5.05□□□□□ -1.6
CCDC59-204ENST00000550589 NFXL1Q6ZNB6 911 aa5.05□□□□□ -1.6
CCDC59-204ENST00000550589 RBM43Q6ZSC3 357 aaKnown RBP5.05□□□□□ -1.6
CCDC59-204ENST00000550589 VPS37DQ86XT2 251 aa5.05□□□□□ -1.6
CCDC59-204ENST00000550589 TRIM22Q8IYM9 498 aa5.05□□□□□ -1.6
CCDC59-204ENST00000550589 SPATA5Q8NB90 893 aa5.05□□□□□ -1.6
CCDC59-204ENST00000550589 CHAMP1Q96JM3 812 aa5.05□□□□□ -1.6
CCDC59-204ENST00000550589 SDF4Q9BRK5 362 aa5.05□□□□□ -1.6
CCDC59-204ENST00000550589 PUS7LQ9H0K6 701 aaKnown RBP5.05□□□□□ -1.6
CCDC59-204ENST00000550589 ALG2Q9H553 416 aa5.05□□□□□ -1.6
CCDC59-204ENST00000550589 PRM3Q9NNZ6 103 aa5.05□□□□□ -1.6
CCDC59-204ENST00000550589 ORC3Q9UBD5 711 aaPredicted RBP5.05□□□□□ -1.6
CCDC59-204ENST00000550589 AFDNP55196 1824 aaKnown RBP5.04□□□□□ -1.6
CCDC59-204ENST00000550589 UBR2Q8IWV8 1755 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 LRP6O75581 1613 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 LOC102724428A0A0B4J2F2 783 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 A0A1W2PQ27 194 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 A0A1W2PQ64 194 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 A0A1W2PQD8 194 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 SPINT1O43278 529 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 PCP11498 1178 aaKnown RBP5.04□□□□□ -1.6
CCDC59-204ENST00000550589 LIFRP42702 1097 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 MCAMP43121 646 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 SIK1P57059 783 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 CAMK4Q16566 473 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 STX1AQ16623 288 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 MFSD6Q6ZSS7 791 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 STOX1Q6ZVD7 989 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 CCAR1Q8IX12 1150 aaKnown RBP5.04□□□□□ -1.6
CCDC59-204ENST00000550589 FBXO18Q8NFZ0 1043 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 PIBF1Q8WXW3 757 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 PRIMPOLQ96LW4 560 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 MAP7D2Q96T17 732 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 TSEN34Q9BSV6 310 aaKnown RBP5.04□□□□□ -1.6
CCDC59-204ENST00000550589 FUCA2Q9BTY2 467 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 LRRC2Q9BYS8 371 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 TRIM5Q9C035 493 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 NYXQ9GZU5 481 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 RTEL1Q9NZ71 1219 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 LRP2BPQ9P2M1 347 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 NIP7Q9Y221 180 aaKnown RBP eCLIP5.04□□□□□ -1.6
CCDC59-204ENST00000550589 SLC12A7Q9Y666 1083 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 DISP2A7MBM2 1401 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 RTL9Q8NET4 1388 aa5.04□□□□□ -1.6
CCDC59-204ENST00000550589 ZNF532Q9HCE3 1301 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 SALL1Q9NSC2 1324 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 SMTNL1A8MU46 457 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 ZBTB43O43298 467 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 TOM1O60784 492 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 BMP2P12643 396 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 ADORA1P30542 326 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 IARSP41252 1262 aaKnown RBP5.03□□□□□ -1.6
CCDC59-204ENST00000550589 HAND2P61296 217 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 AKAP17AQ02040 695 aaKnown RBP5.03□□□□□ -1.6
CCDC59-204ENST00000550589 SCARF1Q14162 830 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 MB21D2Q8IYB1 491 aaPredicted RBP5.03□□□□□ -1.6
CCDC59-204ENST00000550589 CEP57L1Q8IYX8 460 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 VGLL2Q8N8G2 317 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 MRPS27Q92552 414 aaKnown RBP5.03□□□□□ -1.6
CCDC59-204ENST00000550589 ZNF395Q9H8N7 513 aaPredicted RBP5.03□□□□□ -1.6
CCDC59-204ENST00000550589 DNMT3LQ9UJW3 386 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 CEP131Q9UPN4 1083 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 TAF6LQ9Y6J9 622 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 ATRNO75882 1429 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 COL14A1Q05707 1796 aaKnown RBP5.03□□□□□ -1.6
CCDC59-204ENST00000550589 SPATA31A1Q5TZJ5 1347 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 PNPLA7Q6ZV29 1317 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 PIK3CDO00329 1044 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 SPTLC2O15270 562 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 ADH1AP07327 375 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 SLC3A2P08195 630 aaKnown RBP5.03□□□□□ -1.6
CCDC59-204ENST00000550589 PDE6AP16499 860 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 LIG1P18858 919 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 FGFR2P21802 821 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 CTSOP43234 321 aaPredicted RBP5.03□□□□□ -1.6
CCDC59-204ENST00000550589 CRKLP46109 303 aaKnown RBP5.03□□□□□ -1.6
CCDC59-204ENST00000550589 TDO2P48775 406 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 RELBQ01201 579 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 CEBPZQ03701 1054 aaKnown RBP5.03□□□□□ -1.6
CCDC59-204ENST00000550589 SSRP1Q08945 709 aaKnown RBP5.03□□□□□ -1.6
CCDC59-204ENST00000550589 UBE4AQ14139 1066 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 NOLC1Q14978 699 aaKnown RBP eCLIP5.03□□□□□ -1.6
CCDC59-204ENST00000550589 ANO6Q4KMQ2 910 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 TMEM67Q5HYA8 995 aa5.03□□□□□ -1.6
CCDC59-204ENST00000550589 SGMS1Q86VZ5 419 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms