RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 KCNB2Q92953 911 aa20.27■□□□□ 0.84
BRF1-217ENST00000550375 ZSCAN10Q96SZ4 725 aaPredicted RBP20.27■□□□□ 0.84
BRF1-217ENST00000550375 UBAC1Q9BSL1 405 aa20.27■□□□□ 0.84
BRF1-217ENST00000550375 TSGA10IPQ3SY00 556 aa20.26■□□□□ 0.83
BRF1-217ENST00000550375 PPP4R3BQ5MIZ7 849 aa20.26■□□□□ 0.83
BRF1-217ENST00000550375 OTUD7BQ6GQQ9 843 aa20.26■□□□□ 0.83
BRF1-217ENST00000550375 SPICE1Q8N0Z3 855 aa20.26■□□□□ 0.83
BRF1-217ENST00000550375 CHMP4CQ96CF2 233 aa20.26■□□□□ 0.83
BRF1-217ENST00000550375 NEK1Q96PY6 1258 aa20.26■□□□□ 0.83
BRF1-217ENST00000550375 GOPCQ9HD26 462 aa20.26■□□□□ 0.83
BRF1-217ENST00000550375 TNKSO95271 1327 aa20.25■□□□□ 0.83
BRF1-217ENST00000550375 PDHXO00330 501 aa20.25■□□□□ 0.83
BRF1-217ENST00000550375 ANTXR2P58335 489 aa20.25■□□□□ 0.83
BRF1-217ENST00000550375 KRT32Q14532 448 aa20.25■□□□□ 0.83
BRF1-217ENST00000550375 ANKRD23Q86SG2 305 aa20.25■□□□□ 0.83
BRF1-217ENST00000550375 MKL1Q969V6 931 aa20.25■□□□□ 0.83
BRF1-217ENST00000550375 VCPKMTQ9H867 229 aa20.25■□□□□ 0.83
BRF1-217ENST00000550375 RNF186Q9NXI6 227 aa20.25■□□□□ 0.83
BRF1-217ENST00000550375 AGTPBP1Q9UPW5 1226 aa20.25■□□□□ 0.83
BRF1-217ENST00000550375 MTMR7Q9Y216 660 aa20.25■□□□□ 0.83
BRF1-217ENST00000550375 TRPA1O75762 1119 aa20.24■□□□□ 0.83
BRF1-217ENST00000550375 VCAM1P19320 739 aa20.24■□□□□ 0.83
BRF1-217ENST00000550375 MCM5P33992 734 aa20.24■□□□□ 0.83
BRF1-217ENST00000550375 CCDC178Q5BJE1 867 aa20.24■□□□□ 0.83
BRF1-217ENST00000550375 RCSD1Q6JBY9 416 aa20.24■□□□□ 0.83
BRF1-217ENST00000550375 ENAHQ8N8S7 591 aaPredicted RBP20.24■□□□□ 0.83
BRF1-217ENST00000550375 C12orf42Q96LP6 360 aa20.24■□□□□ 0.83
BRF1-217ENST00000550375 JAKMIP1Q96N16 626 aaKnown RBP20.24■□□□□ 0.83
BRF1-217ENST00000550375 TMEM47Q9BQJ4 181 aa20.24■□□□□ 0.83
BRF1-217ENST00000550375 BEGAINQ9BUH8 593 aa20.24■□□□□ 0.83
BRF1-217ENST00000550375 F5H6K3 240 aa20.23■□□□□ 0.83
BRF1-217ENST00000550375 IFIT3O14879 490 aaKnown RBP20.23■□□□□ 0.83
BRF1-217ENST00000550375 PRC1O43663 620 aa20.23■□□□□ 0.83
BRF1-217ENST00000550375 TOP1P11387 765 aaKnown RBP20.23■□□□□ 0.83
BRF1-217ENST00000550375 NOVP48745 357 aa20.23■□□□□ 0.83
BRF1-217ENST00000550375 KLRC3Q07444 240 aa20.23■□□□□ 0.83
BRF1-217ENST00000550375 TTC14Q96N46 770 aa20.23■□□□□ 0.83
BRF1-217ENST00000550375 ERICH2A1L162 156 aa20.22■□□□□ 0.83
BRF1-217ENST00000550375 NDUFB10O96000 172 aa20.22■□□□□ 0.83
BRF1-217ENST00000550375 CPA1P15085 419 aa20.22■□□□□ 0.83
BRF1-217ENST00000550375 TAF1CQ15572 869 aaPredicted RBP20.22■□□□□ 0.83
BRF1-217ENST00000550375 DGKHQ86XP1 1220 aa20.22■□□□□ 0.83
BRF1-217ENST00000550375 NUP88Q99567 741 aaPredicted RBP20.22■□□□□ 0.83
BRF1-217ENST00000550375 LRRC2Q9BYS8 371 aa20.22■□□□□ 0.83
BRF1-217ENST00000550375 RPAP3Q9H6T3 665 aaPredicted RBP20.22■□□□□ 0.83
BRF1-217ENST00000550375 WBP1LQ9NX94 342 aa20.22■□□□□ 0.83
BRF1-217ENST00000550375 FOXN1O15353 648 aa20.21■□□□□ 0.83
BRF1-217ENST00000550375 ALDH1A1P00352 501 aa20.21■□□□□ 0.83
BRF1-217ENST00000550375 CYP2C8P10632 490 aa20.21■□□□□ 0.83
BRF1-217ENST00000550375 PABPC4Q13310 644 aaKnown RBP eCLIP20.21■□□□□ 0.83
BRF1-217ENST00000550375 SART3Q15020 963 aaKnown RBP20.21■□□□□ 0.83
BRF1-217ENST00000550375 SEC23AQ15436 765 aa20.21■□□□□ 0.83
BRF1-217ENST00000550375 TMEM67Q5HYA8 995 aa20.21■□□□□ 0.83
BRF1-217ENST00000550375 IFIT1BQ5T764 474 aaKnown RBP20.21■□□□□ 0.83
BRF1-217ENST00000550375 SLFN13Q68D06 897 aa20.21■□□□□ 0.83
BRF1-217ENST00000550375 LPAR1Q92633 364 aa20.21■□□□□ 0.83
BRF1-217ENST00000550375 TCEANC2Q96MN5 208 aa20.21■□□□□ 0.83
BRF1-217ENST00000550375 TANGO6Q9C0B7 1094 aa20.21■□□□□ 0.83
BRF1-217ENST00000550375 GPHNQ9NQX3 736 aaPredicted RBP20.21■□□□□ 0.83
BRF1-217ENST00000550375 TSKSQ9UJT2 592 aa20.21■□□□□ 0.83
BRF1-217ENST00000550375 ISY1Q9ULR0 285 aaKnown RBP20.21■□□□□ 0.83
BRF1-217ENST00000550375 TBC1D8O95759 1140 aa20.21■□□□□ 0.83
BRF1-217ENST00000550375 CASTP20810 708 aaKnown RBP20.21■□□□□ 0.83
BRF1-217ENST00000550375 OSBPP22059 807 aa20.21■□□□□ 0.83
BRF1-217ENST00000550375 WTAPQ15007 396 aa20.21■□□□□ 0.83
BRF1-217ENST00000550375 FAM83BQ5T0W9 1011 aa20.21■□□□□ 0.83
BRF1-217ENST00000550375 RASGRP2Q7LDG7 609 aa20.21■□□□□ 0.83
BRF1-217ENST00000550375 GMCL1P1Q8NEA9 526 aa20.21■□□□□ 0.83
BRF1-217ENST00000550375 ANKS1AQ92625 1134 aa20.21■□□□□ 0.83
BRF1-217ENST00000550375 KAT14Q9H8E8 782 aa20.21■□□□□ 0.83
BRF1-217ENST00000550375 SENP2Q9HC62 589 aa20.21■□□□□ 0.83
BRF1-217ENST00000550375 ZCCHC17Q9NP64 241 aaKnown RBP20.21■□□□□ 0.83
BRF1-217ENST00000550375 SYNPO2Q9UMS6 1093 aa20.21■□□□□ 0.83
BRF1-217ENST00000550375 USP17L15C9J2P7 530 aa20.2■□□□□ 0.82
BRF1-217ENST00000550375 USP17L13C9JLJ4 530 aa20.2■□□□□ 0.82
BRF1-217ENST00000550375 USP17L11C9JVI0 530 aa20.2■□□□□ 0.82
BRF1-217ENST00000550375 USP17L18D6R9N7 530 aa20.2■□□□□ 0.82
BRF1-217ENST00000550375 USP17L22D6RA61 530 aa20.2■□□□□ 0.82
BRF1-217ENST00000550375 USP17L17D6RBQ6 530 aa20.2■□□□□ 0.82
BRF1-217ENST00000550375 USP17L19D6RCP7 530 aa20.2■□□□□ 0.82
BRF1-217ENST00000550375 USP17L20D6RJB6 530 aa20.2■□□□□ 0.82
BRF1-217ENST00000550375 WDR46O15213 610 aaKnown RBP20.2■□□□□ 0.82
BRF1-217ENST00000550375 PSMA5P28066 241 aa20.2■□□□□ 0.82
BRF1-217ENST00000550375 IRX3P78415 501 aaPredicted RBP20.2■□□□□ 0.82
BRF1-217ENST00000550375 USP17L24Q0WX57 530 aa20.2■□□□□ 0.82
BRF1-217ENST00000550375 CRHR2Q13324 411 aa20.2■□□□□ 0.82
BRF1-217ENST00000550375 BLOC1S2Q6QNY1 142 aa20.2■□□□□ 0.82
BRF1-217ENST00000550375 CATSPERGQ6ZRH7 1159 aa20.2■□□□□ 0.82
BRF1-217ENST00000550375 DHX32Q7L7V1 743 aaKnown RBP20.2■□□□□ 0.82
BRF1-217ENST00000550375 IGDCC4Q8TDY8 1250 aa20.2■□□□□ 0.82
BRF1-217ENST00000550375 ASCC2Q9H1I8 757 aaPredicted RBP20.2■□□□□ 0.82
BRF1-217ENST00000550375 R3HDMLQ9H3Y0 253 aa20.2■□□□□ 0.82
BRF1-217ENST00000550375 ZFYVE28Q9HCC9 887 aa20.2■□□□□ 0.82
BRF1-217ENST00000550375 SLC45A1Q9Y2W3 748 aa20.2■□□□□ 0.82
BRF1-217ENST00000550375 CA12O43570 354 aa20.19■□□□□ 0.82
BRF1-217ENST00000550375 HMGB1P09429 215 aaKnown RBP20.19■□□□□ 0.82
BRF1-217ENST00000550375 HOXA7P31268 230 aaPredicted RBP20.19■□□□□ 0.82
BRF1-217ENST00000550375 EXOSC10Q01780 885 aaKnown RBP20.19■□□□□ 0.82
BRF1-217ENST00000550375 SAMD1Q6SPF0 538 aaPredicted RBP20.19■□□□□ 0.82
BRF1-217ENST00000550375 PNMA1Q8ND90 353 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms