RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 PDE4DIPQ5VU43 2346 aa13.33□□□□□ -0.28
RAB5B-208ENST00000550283 HIP1O00291 1037 aa13.33□□□□□ -0.28
RAB5B-208ENST00000550283 LACTBP83111 547 aaPredicted RBP13.33□□□□□ -0.28
RAB5B-208ENST00000550283 Q3C1V9 767 aa13.33□□□□□ -0.28
RAB5B-208ENST00000550283 BMP2KLQ5H9B9 411 aa13.33□□□□□ -0.28
RAB5B-208ENST00000550283 LRRC47Q8N1G4 583 aaKnown RBP13.33□□□□□ -0.28
RAB5B-208ENST00000550283 NEDD1Q8NHV4 660 aa13.33□□□□□ -0.28
RAB5B-208ENST00000550283 DSCC1Q9BVC3 393 aa13.33□□□□□ -0.28
RAB5B-208ENST00000550283 FBXO28Q9NVF7 368 aa13.33□□□□□ -0.28
RAB5B-208ENST00000550283 MTMR4Q9NYA4 1195 aa13.33□□□□□ -0.28
RAB5B-208ENST00000550283 TMOD4Q9NZQ9 345 aa13.33□□□□□ -0.28
RAB5B-208ENST00000550283 RBPJLQ9UBG7 517 aa13.33□□□□□ -0.28
RAB5B-208ENST00000550283 LAMA4Q16363 1823 aa13.33□□□□□ -0.28
RAB5B-208ENST00000550283 PLIN4Q96Q06 1357 aa13.32□□□□□ -0.28
RAB5B-208ENST00000550283 ORC4O43929 436 aa13.32□□□□□ -0.28
RAB5B-208ENST00000550283 HERVK_113P62684 666 aa13.32□□□□□ -0.28
RAB5B-208ENST00000550283 RRP12Q5JTH9 1297 aaKnown RBP13.32□□□□□ -0.28
RAB5B-208ENST00000550283 CATSPERGQ6ZRH7 1159 aa13.32□□□□□ -0.28
RAB5B-208ENST00000550283 STOX1Q6ZVD7 989 aa13.32□□□□□ -0.28
RAB5B-208ENST00000550283 ESYT1Q9BSJ8 1104 aa13.32□□□□□ -0.28
RAB5B-208ENST00000550283 LSG1Q9H089 658 aaKnown RBP13.32□□□□□ -0.28
RAB5B-208ENST00000550283 VCPKMTQ9H867 229 aa13.32□□□□□ -0.28
RAB5B-208ENST00000550283 KANSL2Q9H9L4 492 aa13.32□□□□□ -0.28
RAB5B-208ENST00000550283 BTBD7Q9P203 1132 aa13.32□□□□□ -0.28
RAB5B-208ENST00000550283 CLIP2Q9UDT6 1046 aa13.32□□□□□ -0.28
RAB5B-208ENST00000550283 TAOK2Q9UL54 1235 aa13.32□□□□□ -0.28
RAB5B-208ENST00000550283 GABRQQ9UN88 632 aa13.32□□□□□ -0.28
RAB5B-208ENST00000550283 TRIM17Q9Y577 477 aa13.32□□□□□ -0.28
RAB5B-208ENST00000550283 SPDYE16A6NNV3 312 aaPredicted RBP13.31□□□□□ -0.28
RAB5B-208ENST00000550283 AKNAD1Q5T1N1 836 aa13.31□□□□□ -0.28
RAB5B-208ENST00000550283 RCSD1Q6JBY9 416 aa13.31□□□□□ -0.28
RAB5B-208ENST00000550283 ZNF444Q8N0Y2 327 aaPredicted RBP13.31□□□□□ -0.28
RAB5B-208ENST00000550283 SMCR8Q8TEV9 937 aaPredicted RBP13.31□□□□□ -0.28
RAB5B-208ENST00000550283 STAG1Q8WVM7 1258 aa13.31□□□□□ -0.28
RAB5B-208ENST00000550283 ZKSCAN3Q9BRR0 538 aa13.31□□□□□ -0.28
RAB5B-208ENST00000550283 NYAP2Q9P242 653 aa13.31□□□□□ -0.28
RAB5B-208ENST00000550283 PARP14Q460N5 1801 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 USP17L15C9J2P7 530 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 USP17L13C9JLJ4 530 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 USP17L11C9JVI0 530 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 USP17L18D6R9N7 530 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 USP17L22D6RA61 530 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 USP17L17D6RBQ6 530 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 USP17L19D6RCP7 530 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 USP17L20D6RJB6 530 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 RANBP6O60518 1105 aaKnown RBP13.3□□□□□ -0.28
RAB5B-208ENST00000550283 NDUFB10O96000 172 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 CYP21A2P08686 494 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 TSPY3P0CV98 308 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 TSPY8P0CW00 308 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 OSBPP22059 807 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 PSMC4P43686 418 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 NOVP48745 357 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 IRX3P78415 501 aaPredicted RBP13.3□□□□□ -0.28
RAB5B-208ENST00000550283 PDE4BQ07343 736 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 USP17L24Q0WX57 530 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 FAM83BQ5T0W9 1011 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 ATG4CQ96DT6 458 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 ERO1AQ96HE7 468 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 PORCNQ9H237 461 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 EFCC1Q9HA90 598 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 ARHGEF10LQ9HCE6 1279 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 HPS5Q9UPZ3 1129 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 PTCH2Q9Y6C5 1203 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 RAD50Q92878 1312 aa13.3□□□□□ -0.28
RAB5B-208ENST00000550283 B4E1Z4 1266 aa13.29□□□□□ -0.28
RAB5B-208ENST00000550283 F5H6K3 240 aa13.29□□□□□ -0.28
RAB5B-208ENST00000550283 USP14P54578 494 aa13.29□□□□□ -0.28
RAB5B-208ENST00000550283 KLRC3Q07444 240 aa13.29□□□□□ -0.28
RAB5B-208ENST00000550283 CYB5R4Q7L1T6 521 aa13.29□□□□□ -0.28
RAB5B-208ENST00000550283 MAP4K1Q92918 833 aa13.29□□□□□ -0.28
RAB5B-208ENST00000550283 MKL1Q969V6 931 aa13.29□□□□□ -0.28
RAB5B-208ENST00000550283 PAGR1Q9BTK6 254 aa13.29□□□□□ -0.28
RAB5B-208ENST00000550283 TOMM22Q9NS69 142 aa13.29□□□□□ -0.28
RAB5B-208ENST00000550283 MORF4L1Q9UBU8 362 aa13.29□□□□□ -0.28
RAB5B-208ENST00000550283 PTPN22Q9Y2R2 807 aa13.29□□□□□ -0.28
RAB5B-208ENST00000550283 A0A0G2JMZ2 1700 aa13.29□□□□□ -0.28
RAB5B-208ENST00000550283 PLXNB2O15031 1838 aa13.28□□□□□ -0.28
RAB5B-208ENST00000550283 TSPY2A6NKD2 308 aa13.28□□□□□ -0.28
RAB5B-208ENST00000550283 ZNF213O14771 459 aa13.28□□□□□ -0.28
RAB5B-208ENST00000550283 RAD21O60216 631 aa13.28□□□□□ -0.28
RAB5B-208ENST00000550283 KDM4AO75164 1064 aa13.28□□□□□ -0.28
RAB5B-208ENST00000550283 MFAP1P55081 439 aaKnown RBP13.28□□□□□ -0.28
RAB5B-208ENST00000550283 PRKCZQ05513 592 aa13.28□□□□□ -0.28
RAB5B-208ENST00000550283 FAM110CQ1W6H9 321 aa13.28□□□□□ -0.28
RAB5B-208ENST00000550283 ERICH6BQ5W0A0 696 aa13.28□□□□□ -0.28
RAB5B-208ENST00000550283 TANGO6Q9C0B7 1094 aa13.28□□□□□ -0.28
RAB5B-208ENST00000550283 SENP2Q9HC62 589 aa13.28□□□□□ -0.28
RAB5B-208ENST00000550283 PNMA3Q9UL41 463 aa13.28□□□□□ -0.28
RAB5B-208ENST00000550283 RBM8AQ9Y5S9 174 aaKnown RBP13.28□□□□□ -0.28
RAB5B-208ENST00000550283 MYH4Q9Y623 1939 aa13.28□□□□□ -0.28
RAB5B-208ENST00000550283 MGAMO43451 1857 aa13.27□□□□□ -0.28
RAB5B-208ENST00000550283 BRCA2P51587 3418 aa13.27□□□□□ -0.28
RAB5B-208ENST00000550283 FMNL1O95466 1100 aaPredicted RBP13.27□□□□□ -0.29
RAB5B-208ENST00000550283 TTLL1O95922 423 aa13.27□□□□□ -0.29
RAB5B-208ENST00000550283 SLC3A2P08195 630 aaKnown RBP13.27□□□□□ -0.29
RAB5B-208ENST00000550283 TAL1P17542 331 aaPredicted RBP13.27□□□□□ -0.29
RAB5B-208ENST00000550283 DSG3P32926 999 aa13.27□□□□□ -0.29
RAB5B-208ENST00000550283 ERVK-9P63128 1117 aa13.27□□□□□ -0.29
RAB5B-208ENST00000550283 ERVK-24P63145 666 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms